RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 CTDP1Q9Y5B0 961 aaPredicted RBP19.8■□□□□ 0.76
HSPG2-208ENST00000471322 ERCC3P19447 782 aa19.8■□□□□ 0.76
HSPG2-208ENST00000471322 HOXD10P28358 340 aa19.8■□□□□ 0.76
HSPG2-208ENST00000471322 MAPK4P31152 587 aa19.8■□□□□ 0.76
HSPG2-208ENST00000471322 INF2Q27J81 1249 aa19.8■□□□□ 0.76
HSPG2-208ENST00000471322 SYDE2Q5VT97 1194 aa19.8■□□□□ 0.76
HSPG2-208ENST00000471322 MCTP2Q6DN12 878 aa19.8■□□□□ 0.76
HSPG2-208ENST00000471322 NEK8Q86SG6 692 aa19.8■□□□□ 0.76
HSPG2-208ENST00000471322 CUL5Q93034 780 aa19.8■□□□□ 0.76
HSPG2-208ENST00000471322 ABHD8Q96I13 439 aa19.8■□□□□ 0.76
HSPG2-208ENST00000471322 NAT10Q9H0A0 1025 aaKnown RBP19.8■□□□□ 0.76
HSPG2-208ENST00000471322 USP25Q9UHP3 1055 aa19.8■□□□□ 0.76
HSPG2-208ENST00000471322 PRR12Q9ULL5 1215 aa19.8■□□□□ 0.76
HSPG2-208ENST00000471322 WNT7AO00755 349 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 ZBED4O75132 1171 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 GNRH1P01148 92 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 TAL1P17542 331 aaPredicted RBP19.79■□□□□ 0.76
HSPG2-208ENST00000471322 LONP1P36776 959 aaKnown RBP19.79■□□□□ 0.76
HSPG2-208ENST00000471322 STAT3P40763 770 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 PRPHP41219 470 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 GRIN1Q05586 938 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 SNRNP48Q6IEG0 339 aaKnown RBP19.79■□□□□ 0.76
HSPG2-208ENST00000471322 CCDC174Q6PII3 467 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 PLEKHH3Q7Z736 793 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 TEX2Q8IWB9 1127 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 C4orf32Q8N8J7 132 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 SH3TC2Q8TF17 1288 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 SLC38A10Q9HBR0 1119 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 A0A0G2JMZ2 1700 aa19.79■□□□□ 0.76
HSPG2-208ENST00000471322 ZNF165P49910 485 aa19.78■□□□□ 0.76
HSPG2-208ENST00000471322 CDC37Q16543 378 aaPredicted RBP19.78■□□□□ 0.76
HSPG2-208ENST00000471322 QRICH1Q2TAL8 776 aa19.78■□□□□ 0.76
HSPG2-208ENST00000471322 LONRF3Q496Y0 759 aa19.78■□□□□ 0.76
HSPG2-208ENST00000471322 SPECC1Q5M775 1068 aa19.78■□□□□ 0.76
HSPG2-208ENST00000471322 FAM160B2Q86V87 743 aa19.78■□□□□ 0.76
HSPG2-208ENST00000471322 PSTPIP2Q9H939 334 aa19.78■□□□□ 0.76
HSPG2-208ENST00000471322 RIPK3Q9Y572 518 aa19.78■□□□□ 0.76
HSPG2-208ENST00000471322 VWA3AA6NCI4 1184 aa19.77■□□□□ 0.76
HSPG2-208ENST00000471322 POLR2DO15514 142 aaKnown RBP19.77■□□□□ 0.76
HSPG2-208ENST00000471322 PLA2G6O60733 806 aa19.77■□□□□ 0.76
HSPG2-208ENST00000471322 PPP1R11O60927 126 aaPredicted RBP19.77■□□□□ 0.76
HSPG2-208ENST00000471322 CAPN15O75808 1086 aa19.77■□□□□ 0.76
HSPG2-208ENST00000471322 ELNP15502 786 aa19.77■□□□□ 0.76
HSPG2-208ENST00000471322 DTHD1Q6ZMT9 781 aa19.77■□□□□ 0.76
HSPG2-208ENST00000471322 PDLIM2Q96JY6 352 aa19.77■□□□□ 0.76
HSPG2-208ENST00000471322 AMNQ9BXJ7 453 aa19.77■□□□□ 0.76
HSPG2-208ENST00000471322 HOMER2Q9NSB8 354 aa19.77■□□□□ 0.76
HSPG2-208ENST00000471322 BIN2Q9UBW5 565 aaPredicted RBP19.77■□□□□ 0.76
HSPG2-208ENST00000471322 GJD2Q9UKL4 321 aa19.77■□□□□ 0.76
HSPG2-208ENST00000471322 PCDHA1Q9Y5I3 950 aa19.77■□□□□ 0.76
HSPG2-208ENST00000471322 CYP2B6P20813 491 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 SLC9C1Q4G0N8 1177 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 JAKMIP3Q5VZ66 844 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 CEP57L1Q8IYX8 460 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 AGBL1Q96MI9 1066 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 TEX13BQ9BXU2 312 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 DNAJC25Q9H1X3 360 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 CBX8Q9HC52 389 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 TUBE1Q9UJT0 475 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 IVNS1ABPQ9Y6Y0 642 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 CCDC85CA6NKD9 419 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 TXLNAP40222 546 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 FBXO11Q86XK2 927 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 TBCKQ8TEA7 893 aa19.76■□□□□ 0.75
HSPG2-208ENST00000471322 SYMPKQ92797 1274 aaKnown RBP19.76■□□□□ 0.75
HSPG2-208ENST00000471322 NAP1L4Q99733 375 aaKnown RBP19.76■□□□□ 0.75
HSPG2-208ENST00000471322 NLRP12P59046 1061 aa19.75■□□□□ 0.75
HSPG2-208ENST00000471322 LETM2Q2VYF4 491 aa19.75■□□□□ 0.75
HSPG2-208ENST00000471322 RIOX2Q8IUF8 465 aa19.75■□□□□ 0.75
HSPG2-208ENST00000471322 TRIM44Q96DX7 344 aaPredicted RBP19.75■□□□□ 0.75
HSPG2-208ENST00000471322 NUDT12Q9BQG2 462 aa19.75■□□□□ 0.75
HSPG2-208ENST00000471322 ZNF536O15090 1300 aa19.74■□□□□ 0.75
HSPG2-208ENST00000471322 ADCY3O60266 1144 aa19.74■□□□□ 0.75
HSPG2-208ENST00000471322 CCNT1O60563 726 aaKnown RBP19.74■□□□□ 0.75
HSPG2-208ENST00000471322 CLK2P49760 499 aaKnown RBP19.74■□□□□ 0.75
HSPG2-208ENST00000471322 PRMT2P55345 433 aa19.74■□□□□ 0.75
HSPG2-208ENST00000471322 EPSTI1Q96J88 318 aa19.74■□□□□ 0.75
HSPG2-208ENST00000471322 MROH8Q9H579 483 aa19.74■□□□□ 0.75
HSPG2-208ENST00000471322 NEMFO60524 1076 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 OR52Z1P0C646 297 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 SLFN14P0C7P3 912 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 ADORA2AP29274 412 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 GRK4P32298 578 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 MDM2Q00987 491 aaPredicted RBP19.73■□□□□ 0.75
HSPG2-208ENST00000471322 POSTNQ15063 836 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 MORN1Q5T089 497 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 USP49Q70CQ1 688 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 IQUBQ8NA54 791 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 SHCBP1Q8NEM2 672 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 AK8Q96MA6 479 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 BPIFA3Q9BQP9 254 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 TMEM260Q9NX78 707 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 SERTAD1Q9UHV2 236 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 GOLGA6L19H0YKK7 550 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 ACTN4O43707 911 aaKnown RBP19.73■□□□□ 0.75
HSPG2-208ENST00000471322 SLC25A27O95847 323 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 PGK2P07205 417 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 ALAS1P13196 640 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 IL17AQ16552 155 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 CCL14Q16627 93 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms