RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 PCDHA2Q9Y5H9 948 aa7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 A0A1B0GTL3 188 aa7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 BLACEA4D250 179 aa7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 RFXAPO00287 272 aa7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 STK10O94804 968 aaKnown RBP7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 C8BP07358 591 aa7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 PFKLP17858 780 aa7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 RBL2Q08999 1139 aa7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 SERINC3Q13530 473 aa7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 FOXB2Q5VYV0 432 aa7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 FAM26EQ8N5C1 309 aa7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 ZNF526Q8TF50 670 aaPredicted RBP7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 CPA5Q8WXQ8 436 aa7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 XYLT2Q9H1B5 865 aa7.94□□□□□ -1.14
PRPF40A-206ENST00000471167 PRODHO43272 600 aa7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 FGFR1P11362 822 aa7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 HOXA5P20719 270 aa7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 CAP1Q01518 475 aa7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 CACNB2Q08289 660 aaPredicted RBP7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 SLC9A5Q14940 896 aa7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 KCNT2Q6UVM3 1135 aa7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 CABP7Q86V35 215 aa7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 LINC01356Q8N9X3 169 aa7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 SYT8Q8NBV8 401 aa7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 PARD6AQ9NPB6 346 aa7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 SPATA6Q9NWH7 488 aaPredicted RBP7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 PALD1Q9ULE6 856 aa7.93□□□□□ -1.14
PRPF40A-206ENST00000471167 DIAPH1O60610 1272 aaKnown RBP7.92□□□□□ -1.14
PRPF40A-206ENST00000471167 ZBTB7AO95365 584 aa7.92□□□□□ -1.14
PRPF40A-206ENST00000471167 PABPC1P11940 636 aaKnown RBP7.92□□□□□ -1.14
PRPF40A-206ENST00000471167 ATP2B1P20020 1258 aa7.92□□□□□ -1.14
PRPF40A-206ENST00000471167 SLC6A11P48066 632 aa7.92□□□□□ -1.14
PRPF40A-206ENST00000471167 HSP90AA2PQ14568 343 aaPredicted RBP7.92□□□□□ -1.14
PRPF40A-206ENST00000471167 MIB1Q86YT6 1006 aa7.92□□□□□ -1.14
PRPF40A-206ENST00000471167 SMARCC2Q8TAQ2 1214 aa7.92□□□□□ -1.14
PRPF40A-206ENST00000471167 KCTD13Q8WZ19 329 aa7.92□□□□□ -1.14
PRPF40A-206ENST00000471167 AARSD1Q9BTE6 412 aaKnown RBP7.92□□□□□ -1.14
PRPF40A-206ENST00000471167 ASXL2Q76L83 1435 aa7.92□□□□□ -1.14
PRPF40A-206ENST00000471167 A0A0G2JLL6 359 aaPredicted RBP7.91□□□□□ -1.14
PRPF40A-206ENST00000471167 FAM221BA6H8Z2 402 aa7.91□□□□□ -1.14
PRPF40A-206ENST00000471167 TADA3O75528 432 aa7.91□□□□□ -1.14
PRPF40A-206ENST00000471167 LSAMPQ13449 338 aa7.91□□□□□ -1.14
PRPF40A-206ENST00000471167 MROH9Q5TGP6 573 aa7.91□□□□□ -1.14
PRPF40A-206ENST00000471167 SAPCD2Q86UD0 394 aa7.91□□□□□ -1.14
PRPF40A-206ENST00000471167 TMEM151BQ8IW70 566 aa7.91□□□□□ -1.14
PRPF40A-206ENST00000471167 CKAP2LQ8IYA6 745 aa7.91□□□□□ -1.14
PRPF40A-206ENST00000471167 TRMT2BQ96GJ1 504 aaKnown RBP7.91□□□□□ -1.14
PRPF40A-206ENST00000471167 TMEM169Q96HH4 297 aa7.91□□□□□ -1.14
PRPF40A-206ENST00000471167 NUDT5Q9UKK9 219 aa7.91□□□□□ -1.14
PRPF40A-206ENST00000471167 WASF3Q9UPY6 502 aa7.91□□□□□ -1.14
PRPF40A-206ENST00000471167 PDPK1O15530 556 aa7.9□□□□□ -1.14
PRPF40A-206ENST00000471167 USP53Q70EK8 1073 aa7.9□□□□□ -1.14
PRPF40A-206ENST00000471167 DCP2Q8IU60 420 aaKnown RBP7.9□□□□□ -1.14
PRPF40A-206ENST00000471167 DDX11Q96FC9 970 aa7.9□□□□□ -1.14
PRPF40A-206ENST00000471167 GORASP1Q9BQQ3 440 aa7.9□□□□□ -1.14
PRPF40A-206ENST00000471167 SPATA9Q9BWV2 254 aa7.9□□□□□ -1.14
PRPF40A-206ENST00000471167 JAM3Q9BX67 310 aa7.9□□□□□ -1.14
PRPF40A-206ENST00000471167 TRIM55Q9BYV6 548 aa7.9□□□□□ -1.14
PRPF40A-206ENST00000471167 CCDC113Q9H0I3 377 aa7.9□□□□□ -1.14
PRPF40A-206ENST00000471167 GPR27Q9NS67 375 aa7.9□□□□□ -1.14
PRPF40A-206ENST00000471167 OTOL1A6NHN0 477 aaPredicted RBP7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 H7BY64 318 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 AGRPO00253 132 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 GTF2F1P35269 517 aaKnown RBP eCLIP7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 RASGRF1Q13972 1273 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 RASA3Q14644 834 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 CR1LQ2VPA4 569 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 MILR1Q7Z6M3 343 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 LINC00482Q8N8I6 264 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 ARRDC4Q8NCT1 418 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 FEZF2Q8TBJ5 459 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 SEC14L1Q92503 715 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 ZNF669Q96BR6 464 aaPredicted RBP7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 PHF20Q9BVI0 1012 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 KRTAP4-7Q9BYR0 210 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 CLDND1Q9NY35 253 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 PFDN2Q9UHV9 154 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 PMF1-BGLAPU3KQ54 211 aa7.89□□□□□ -1.15
PRPF40A-206ENST00000471167 SH3D21A4FU49 640 aa7.88□□□□□ -1.15
PRPF40A-206ENST00000471167 GTF2A2P52657 109 aa7.88□□□□□ -1.15
PRPF40A-206ENST00000471167 SLURP1P55000 103 aa7.88□□□□□ -1.15
PRPF40A-206ENST00000471167 EMC4Q5J8M3 183 aa7.88□□□□□ -1.15
PRPF40A-206ENST00000471167 NSMFQ6X4W1 530 aa7.88□□□□□ -1.15
PRPF40A-206ENST00000471167 RAPGEFL1Q9UHV5 662 aa7.88□□□□□ -1.15
PRPF40A-206ENST00000471167 TCRBV5S2A0A599 114 aa7.87□□□□□ -1.15
PRPF40A-206ENST00000471167 FAM153BP0C7A2 387 aa7.87□□□□□ -1.15
PRPF40A-206ENST00000471167 STAT5AP42229 794 aa7.87□□□□□ -1.15
PRPF40A-206ENST00000471167 NBPF6Q5VWK0 638 aa7.87□□□□□ -1.15
PRPF40A-206ENST00000471167 LIPIQ6XZB0 460 aa7.87□□□□□ -1.15
PRPF40A-206ENST00000471167 STK32CQ86UX6 486 aa7.87□□□□□ -1.15
PRPF40A-206ENST00000471167 NBPF4Q96M43 638 aa7.87□□□□□ -1.15
PRPF40A-206ENST00000471167 ZCCHC4Q9H5U6 513 aa7.87□□□□□ -1.15
PRPF40A-206ENST00000471167 TRAV20A0A0B4J274 112 aa7.86□□□□□ -1.15
PRPF40A-206ENST00000471167 IQCA1LA6NCM1 817 aa7.86□□□□□ -1.15
PRPF40A-206ENST00000471167 CCDC85CA6NKD9 419 aa7.86□□□□□ -1.15
PRPF40A-206ENST00000471167 C6orf222P0C671 652 aaPredicted RBP7.86□□□□□ -1.15
PRPF40A-206ENST00000471167 FAM209AQ5JX71 171 aa7.86□□□□□ -1.15
PRPF40A-206ENST00000471167 LILRA6Q6PI73 481 aa7.86□□□□□ -1.15
PRPF40A-206ENST00000471167 RSPO2Q6UXX9 243 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms