RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 ERVK-5Q9HDB9 667 aa7.1□□□□□ -1.27
VARS-222ENST00000470953 PDGFCQ9NRA1 345 aa7.1□□□□□ -1.27
VARS-222ENST00000470953 TSHZ2Q9NRE2 1034 aa7.1□□□□□ -1.27
VARS-222ENST00000470953 LRP2BPQ9P2M1 347 aa7.1□□□□□ -1.27
VARS-222ENST00000470953 SERPINB13Q9UIV8 391 aa7.1□□□□□ -1.27
VARS-222ENST00000470953 TICRRQ7Z2Z1 1910 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 POTEMA6NI47 508 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 C2CD4DB7Z1M9 353 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 DYNC1LI2O43237 492 aaPredicted RBP7.09□□□□□ -1.27
VARS-222ENST00000470953 BAG3O95817 575 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 HOXD8P13378 290 aaPredicted RBP7.09□□□□□ -1.27
VARS-222ENST00000470953 SMPD1P17405 629 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 IL15P40933 162 aaPredicted RBP7.09□□□□□ -1.27
VARS-222ENST00000470953 CNTN2Q02246 1040 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 TFCP2Q12800 502 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 ZKSCAN2Q63HK3 967 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 NAA16Q6N069 864 aaPredicted RBP7.09□□□□□ -1.27
VARS-222ENST00000470953 POTEGQ6S5H5 508 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 ATF7IPQ6VMQ6 1270 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 NOL8Q76FK4 1167 aaKnown RBP7.09□□□□□ -1.27
VARS-222ENST00000470953 ITPRIPQ8IWB1 547 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 CCDC144CPQ8IYA2 1237 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 DDX11Q96FC9 970 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 NOL10Q9BSC4 688 aaKnown RBP7.09□□□□□ -1.27
VARS-222ENST00000470953 SEZ6LQ9BYH1 1024 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 LMAN2LQ9H0V9 348 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 BCL11AQ9H165 835 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 EHD4Q9H223 541 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 CABP5Q9NP86 173 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 SNRKQ9NRH2 765 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 GPSM3Q9Y4H4 160 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 MICAL3Q7RTP6 2002 aa7.09□□□□□ -1.27
VARS-222ENST00000470953 MYO5AQ9Y4I1 1855 aaKnown RBP7.09□□□□□ -1.28
VARS-222ENST00000470953 KALRNO60229 2985 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 FREM2Q5SZK8 3169 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 MPHOSPH10O00566 681 aaKnown RBP7.08□□□□□ -1.28
VARS-222ENST00000470953 SPTLC1O15269 473 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 BCAR3O75815 825 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 C1QL1O75973 258 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 TOP3BO95985 862 aaKnown RBP7.08□□□□□ -1.28
VARS-222ENST00000470953 TRIM27P14373 513 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 CTNNB1P35222 781 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 SLC4A3P48751 1232 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 CAMK1Q14012 370 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 SPECC1Q5M775 1068 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 ZNF467Q7Z7K2 595 aaPredicted RBP7.08□□□□□ -1.28
VARS-222ENST00000470953 MAML2Q8IZL2 1156 aaPredicted RBP7.08□□□□□ -1.28
VARS-222ENST00000470953 SIX5Q8N196 739 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 DDX1Q92499 740 aaKnown RBP7.08□□□□□ -1.28
VARS-222ENST00000470953 ARHGAP45Q92619 1136 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 MAP4K1Q92918 833 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 MEIS3Q99687 375 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 CDH22Q9UJ99 828 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 WASF3Q9UPY6 502 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 RAI2Q9Y5P3 530 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 CFAP46Q8IYW2 2715 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 CELSR3Q9NYQ7 3312 aa7.08□□□□□ -1.28
VARS-222ENST00000470953 CACNA1IQ9P0X4 2223 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 ABHD14A-ACY1A0A1B0GW23 586 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 MAP3K13O43283 966 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 SRGAP3O43295 1099 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 NBNO60934 754 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 MMP1P03956 469 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 DCNP07585 359 aaKnown RBP7.07□□□□□ -1.28
VARS-222ENST00000470953 PLCG2P16885 1265 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 ARID4AP29374 1257 aaPredicted RBP7.07□□□□□ -1.28
VARS-222ENST00000470953 NRIP1P48552 1158 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 GABPAQ06546 454 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 OS9Q13438 667 aaPredicted RBP7.07□□□□□ -1.28
VARS-222ENST00000470953 MVPQ14764 893 aaKnown RBP7.07□□□□□ -1.28
VARS-222ENST00000470953 SNRNP48Q6IEG0 339 aaKnown RBP7.07□□□□□ -1.28
VARS-222ENST00000470953 EEPD1Q7L9B9 569 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 RBM23Q86U06 439 aaKnown RBP7.07□□□□□ -1.28
VARS-222ENST00000470953 C1orf210Q8IVY1 113 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 MYOCDQ8IZQ8 938 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 MAGEB6Q8N7X4 407 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 MIGA1Q8NAN2 632 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 VN1R2Q8NFZ6 395 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 NEUROD6Q96NK8 337 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 CTAGE1Q96RT6 745 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 VCPKMTQ9H867 229 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 KCNK4Q9NYG8 393 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 FBXO3Q9UK99 471 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 PPP1R9AQ9ULJ8 1098 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 TMX2Q9Y320 296 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 RELNP78509 3460 aa7.07□□□□□ -1.28
VARS-222ENST00000470953 C5orf67F2Z3F1 127 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 STK25O00506 426 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 WDR46O15213 610 aaKnown RBP7.06□□□□□ -1.28
VARS-222ENST00000470953 LGR5O75473 907 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 CXCL10P02778 98 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 GNAI2P04899 355 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 CYP2E1P05181 493 aaPredicted RBP7.06□□□□□ -1.28
VARS-222ENST00000470953 MS4A1P11836 297 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 DNAJB1P25685 340 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 USP5P45974 858 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 PURAQ00577 322 aaKnown RBP7.06□□□□□ -1.28
VARS-222ENST00000470953 FOXC1Q12948 553 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 FAM47CQ5HY64 1035 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 FAM83BQ5T0W9 1011 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms