RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 IGF2BP3O00425 579 aaKnown RBP eCLIP7.66□□□□□ -1.18
VAMP3-202ENST00000470357 STX6O43752 255 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 NMT2O60551 498 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 CTNND1O60716 968 aaKnown RBP7.66□□□□□ -1.18
VAMP3-202ENST00000470357 DEXIO95424 95 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 PARP1P09874 1014 aaKnown RBP7.66□□□□□ -1.18
VAMP3-202ENST00000470357 PTMSP20962 102 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 NF2P35240 595 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 CAP2P40123 477 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 ICA1Q05084 483 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 ST3GAL1Q11201 340 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 TRIM29Q14134 588 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 GRM4Q14833 912 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 RAB3GAP1Q15042 981 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 ASPRV1Q53RT3 343 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 GPATCH4Q5T3I0 446 aaKnown RBP7.66□□□□□ -1.18
VAMP3-202ENST00000470357 LCE2AQ5TA79 106 aaPredicted RBP7.66□□□□□ -1.18
VAMP3-202ENST00000470357 NPAS3Q8IXF0 933 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 MKL1Q969V6 931 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 GBP4Q96PP9 640 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 NCOA5Q9HCD5 579 aaKnown RBP7.66□□□□□ -1.18
VAMP3-202ENST00000470357 ORC3Q9UBD5 711 aaPredicted RBP7.66□□□□□ -1.18
VAMP3-202ENST00000470357 CLIP2Q9UDT6 1046 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 ZBTB21Q9ULJ3 1066 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 FZD1Q9UP38 647 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 HRH3Q9Y5N1 445 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 SLC35F4A4IF30 521 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 GOLGA6L22H0YM25 854 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 PPP1R12BO60237 982 aaPredicted RBP7.65□□□□□ -1.18
VAMP3-202ENST00000470357 BRD1O95696 1058 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 GH2P01242 217 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 ZSCAN22P10073 491 aaPredicted RBP7.65□□□□□ -1.18
VAMP3-202ENST00000470357 SYT1P21579 422 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 GDF10P55107 478 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 INHBEP58166 350 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 TCHHQ07283 1943 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 NTRK3Q16288 839 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 MAP3K11Q16584 847 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 LCE2CQ5TA81 110 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 USP17L2Q6R6M4 530 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 TMTC3Q6ZXV5 915 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 CCDC155Q8N6L0 562 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 GMCL1P1Q8NEA9 526 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 DCAF4Q8WV16 495 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 PTPN18Q99952 460 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 MYL10Q9BUA6 226 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 AS3MTQ9HBK9 375 aa7.65□□□□□ -1.18
VAMP3-202ENST00000470357 BAZ2BQ9UIF8 2168 aaKnown RBP7.65□□□□□ -1.18
VAMP3-202ENST00000470357 PALM3A6NDB9 673 aaPredicted RBP7.64□□□□□ -1.19
VAMP3-202ENST00000470357 MANSC4A6NHS7 340 aaPredicted RBP7.64□□□□□ -1.19
VAMP3-202ENST00000470357 FAM196BA6NMK8 535 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 PHF20L1A8MW92 1017 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 hCG_1984214I3L0E3 225 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 PRPF3O43395 683 aaKnown RBP7.64□□□□□ -1.19
VAMP3-202ENST00000470357 JAK2O60674 1132 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 CTDNEP1O95476 244 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 INHAP05111 366 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 SNHG28P0DPA3 235 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 PDHBP11177 359 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 EEF2P13639 858 aaKnown RBP7.64□□□□□ -1.19
VAMP3-202ENST00000470357 RXRAP19793 462 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 CDC27P30260 824 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 ATP2B2Q01814 1243 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 TRAF1Q13077 416 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 PRKG1Q13976 671 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 SEPT2Q15019 361 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 SAFBQ15424 915 aaKnown RBP eCLIP7.64□□□□□ -1.19
VAMP3-202ENST00000470357 NBPF12Q5TAG4 269 aaPredicted RBP7.64□□□□□ -1.19
VAMP3-202ENST00000470357 MIGA2Q7L4E1 593 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 ARMC9Q7Z3E5 817 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 CCDC144CPQ8IYA2 1237 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 ZNF713Q8N859 430 aaPredicted RBP7.64□□□□□ -1.19
VAMP3-202ENST00000470357 CD99L2Q8TCZ2 262 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 DDX11Q96FC9 970 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 GMCL1Q96IK5 515 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 ZNF333Q96JL9 665 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 CLMNQ96JQ2 1002 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 C8orf76Q96K31 380 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 SPZ1Q9BXG8 430 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 SLC26A6Q9BXS9 759 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 PPP1R12CQ9BZL4 782 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 ZSCAN16Q9H4T2 348 aaPredicted RBP7.64□□□□□ -1.19
VAMP3-202ENST00000470357 PICK1Q9NRD5 415 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 SERTAD1Q9UHV2 236 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 ZNF112Q9UJU3 913 aa7.64□□□□□ -1.19
VAMP3-202ENST00000470357 SSC5DA1L4H1 1573 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 VPS37CA5D8V6 355 aaPredicted RBP7.63□□□□□ -1.19
VAMP3-202ENST00000470357 UNCXA6NJT0 531 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 TMEM229AB2RXF0 380 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 KLRF2D3W0D1 207 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 H0YGN5 161 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 GDF11O95390 407 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 ZBTB48P10074 688 aaPredicted RBP7.63□□□□□ -1.19
VAMP3-202ENST00000470357 IREB2P48200 963 aaKnown RBP7.63□□□□□ -1.19
VAMP3-202ENST00000470357 USP14P54578 494 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 ZNF543Q08ER8 600 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 CRHR2Q13324 411 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 NOL9Q5SY16 702 aaKnown RBP7.63□□□□□ -1.19
VAMP3-202ENST00000470357 SLFN13Q68D06 897 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 ATL3Q6DD88 541 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms