RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 MS4A14Q96JA4 679 aa14.57□□□□□ -0.08
SFXN3-205ENST00000470252 ZIM3Q96PE6 472 aa14.57□□□□□ -0.08
SFXN3-205ENST00000470252 SMCO2A6NFE2 343 aa14.57□□□□□ -0.08
SFXN3-205ENST00000470252 KLRF2D3W0D1 207 aa14.57□□□□□ -0.08
SFXN3-205ENST00000470252 PJA2O43164 708 aa14.57□□□□□ -0.08
SFXN3-205ENST00000470252 SLC1A4P43007 532 aa14.57□□□□□ -0.08
SFXN3-205ENST00000470252 KLHDC7AQ5VTJ3 777 aa14.57□□□□□ -0.08
SFXN3-205ENST00000470252 CERS3Q8IU89 383 aa14.57□□□□□ -0.08
SFXN3-205ENST00000470252 BAP1Q92560 729 aa14.57□□□□□ -0.08
SFXN3-205ENST00000470252 NOX5Q96PH1 765 aa14.57□□□□□ -0.08
SFXN3-205ENST00000470252 SAMM50Q9Y512 469 aa14.57□□□□□ -0.08
SFXN3-205ENST00000470252 PALM3A6NDB9 673 aaPredicted RBP14.56□□□□□ -0.08
SFXN3-205ENST00000470252 MYMKA6NI61 221 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 FGFR1OPO95684 399 aaKnown RBP14.56□□□□□ -0.08
SFXN3-205ENST00000470252 TNFRSF8P28908 595 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 TXKP42681 527 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 PDCLQ13371 301 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 TDRD12Q587J7 1177 aaKnown RBP14.56□□□□□ -0.08
SFXN3-205ENST00000470252 PDXDC1Q6P996 788 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 TMED8Q6PL24 325 aaPredicted RBP14.56□□□□□ -0.08
SFXN3-205ENST00000470252 ZNF444Q8N0Y2 327 aaPredicted RBP14.56□□□□□ -0.08
SFXN3-205ENST00000470252 SLC44A5Q8NCS7 719 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 TMEM47Q9BQJ4 181 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 TANGO6Q9C0B7 1094 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 DNA2P51530 1060 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 SKOR1P84550 965 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 CFAP221Q4G0U5 840 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 MEX3CQ5U5Q3 659 aaKnown RBP14.56□□□□□ -0.08
SFXN3-205ENST00000470252 KCTD16Q68DU8 428 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 BICDL1Q6ZP65 573 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 UNC13DQ70J99 1090 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 TMC4Q7Z404 712 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 POTEDQ86YR6 584 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 IFT20Q8IY31 132 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 SH2D3CQ8N5H7 860 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 C6orf50Q9HD87 102 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 MYH4Q9Y623 1939 aa14.56□□□□□ -0.08
SFXN3-205ENST00000470252 KRT14P02533 472 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 ATP1A2P50993 1020 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 GRB10Q13322 594 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 GLE1Q53GS7 698 aaKnown RBP14.55□□□□□ -0.08
SFXN3-205ENST00000470252 CCDC155Q8N6L0 562 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 TBCKQ8TEA7 893 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 CCDC43Q96MW1 224 aaKnown RBP14.55□□□□□ -0.08
SFXN3-205ENST00000470252 BLOC1S4Q9NUP1 217 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 NFU1Q9UMS0 254 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 NAV1Q8NEY1 1877 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 GLI1P08151 1106 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 CARSP49589 748 aaKnown RBP14.55□□□□□ -0.08
SFXN3-205ENST00000470252 NNTQ13423 1086 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 ASTE1Q2TB18 679 aaPredicted RBP14.55□□□□□ -0.08
SFXN3-205ENST00000470252 MMS22LQ6ZRQ5 1243 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 SH3RF3Q8TEJ3 882 aaPredicted RBP14.55□□□□□ -0.08
SFXN3-205ENST00000470252 IFT81Q8WYA0 676 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 CDK5RAP3Q96JB5 506 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 NLRC4Q9NPP4 1024 aa14.55□□□□□ -0.08
SFXN3-205ENST00000470252 BIN2Q9UBW5 565 aaPredicted RBP14.55□□□□□ -0.08
SFXN3-205ENST00000470252 WNK3Q9BYP7 1800 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 ABCB11O95342 1321 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 ESYT3A0FGR9 886 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 ZSCAN5CA6NGD5 496 aaPredicted RBP14.54□□□□□ -0.08
SFXN3-205ENST00000470252 NDUFAB1O14561 156 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 HEXIM1O94992 359 aaKnown RBP14.54□□□□□ -0.08
SFXN3-205ENST00000470252 GNA11P29992 359 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 CFAP58Q5T655 872 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 SOGA3Q5TF21 947 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 GUF1Q8N442 669 aaKnown RBP14.54□□□□□ -0.08
SFXN3-205ENST00000470252 RNF10Q8N5U6 811 aaKnown RBP14.54□□□□□ -0.08
SFXN3-205ENST00000470252 LARP4BQ92615 738 aaKnown RBP14.54□□□□□ -0.08
SFXN3-205ENST00000470252 KAT2BQ92831 832 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 LZTS2Q9BRK4 669 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 EPB41L5Q9HCM4 733 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 TSKSQ9UJT2 592 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 PVALEFA0A1B0GWK0 134 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 SSU72P8A0A1W2PR75 194 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 ZPR1O75312 459 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 FAM153BP0C7A2 387 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 INPP5BP32019 993 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 GUCY2DQ02846 1103 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 LRRC63Q05C16 580 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 FAM153CQ494X1 144 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 PNMA5Q96PV4 448 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 SPZ1Q9BXG8 430 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 YY1AP1Q9H869 796 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 VAT1LQ9HCJ6 419 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 STK17AQ9UEE5 414 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 FAM153AQ9UHL3 310 aa14.54□□□□□ -0.08
SFXN3-205ENST00000470252 A6NNZ2 444 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 RPS8P62241 208 aaKnown RBP14.53□□□□□ -0.08
SFXN3-205ENST00000470252 PAK2Q13177 524 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 LRRC41Q15345 812 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 TUBB8Q3ZCM7 444 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 HGSNATQ68CP4 663 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 LRRC55Q6ZSA7 311 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 TSG101Q99816 390 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 POLD4Q9HCU8 107 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 GDF3Q9NR23 364 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 TMEM260Q9NX78 707 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 SEC63Q9UGP8 760 aaKnown RBP14.53□□□□□ -0.08
SFXN3-205ENST00000470252 ZEB2O60315 1214 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms