RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 TBX3O15119 743 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 SPTLC2O15270 562 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 COBLO75128 1261 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 TDP2O95551 362 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 NR3C2P08235 984 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 FAM86B2P0C5J1 330 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 ALDH5A1P51649 535 aaPredicted RBP11.8□□□□□ -0.52
THBS3-206ENST00000469769 CNTN2Q02246 1040 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 KCTD2Q14681 263 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 CEP55Q53EZ4 464 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 AXDND1Q5T1B0 1012 aaPredicted RBP11.8□□□□□ -0.52
THBS3-206ENST00000469769 MAMDC4Q6UXC1 1216 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 PLEKHH3Q7Z736 793 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 ZNF579Q8NAF0 562 aaKnown RBP11.8□□□□□ -0.52
THBS3-206ENST00000469769 IL31RAQ8NI17 732 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 SPATA32Q96LK8 384 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 MXRA8Q9BRK3 442 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 TMEM60Q9H2L4 133 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 ADD3Q9UEY8 706 aaKnown RBP11.8□□□□□ -0.52
THBS3-206ENST00000469769 FBXO2Q9UK22 296 aaPredicted RBP11.8□□□□□ -0.52
THBS3-206ENST00000469769 GJD2Q9UKL4 321 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 SRPRBQ9Y5M8 271 aaKnown RBP11.8□□□□□ -0.52
THBS3-206ENST00000469769 LRRC37A2A6NM11 1700 aa11.8□□□□□ -0.52
THBS3-206ENST00000469769 FAM237AA0A1B0GTK4 181 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 MAFGO15525 162 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 FIBPO43427 364 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 SLC37A4O43826 429 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 NEMFO60524 1076 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 CCNT1O60563 726 aaKnown RBP11.79□□□□□ -0.52
THBS3-206ENST00000469769 ITGB5P18084 799 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 ADORA2AP29274 412 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 CTGFP29279 349 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 MCM7P33993 719 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 GRM1Q13255 1194 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 STK38Q15208 465 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 ARHGEF16Q5VV41 709 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 ADALQ6DHV7 355 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 MSL3Q8N5Y2 521 aaKnown RBP11.79□□□□□ -0.52
THBS3-206ENST00000469769 ETNPPLQ8TBG4 499 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 HAS1Q92839 578 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 FERMT2Q96AC1 680 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 FAM20AQ96MK3 541 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 INPP4AQ96PE3 977 aaPredicted RBP11.79□□□□□ -0.52
THBS3-206ENST00000469769 GDPD2Q9HCC8 539 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 JADE2Q9NQC1 790 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 DDX25Q9UHL0 483 aaKnown RBP11.79□□□□□ -0.52
THBS3-206ENST00000469769 KIAA1217Q5T5P2 1943 aa11.79□□□□□ -0.52
THBS3-206ENST00000469769 MCM3APO60318 1980 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 A0A1W2PQ27 194 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 A0A1W2PQ64 194 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 A0A1W2PQD8 194 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 DDX11L8A8MPP1 907 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 EIF3JO75822 258 aaKnown RBP11.78□□□□□ -0.52
THBS3-206ENST00000469769 RGS20O76081 388 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 OR52Z1P0C646 297 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 EIF2AK2P19525 551 aaKnown RBP11.78□□□□□ -0.52
THBS3-206ENST00000469769 ATP2B1P20020 1258 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 ICAM3P32942 547 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 LACTBP83111 547 aaPredicted RBP11.78□□□□□ -0.52
THBS3-206ENST00000469769 SETQ01105 290 aaPredicted RBP11.78□□□□□ -0.52
THBS3-206ENST00000469769 CEBPZQ03701 1054 aaKnown RBP11.78□□□□□ -0.52
THBS3-206ENST00000469769 IRF5Q13568 498 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 NFKBIBQ15653 356 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 IL17AQ16552 155 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 B3GNT9Q6UX72 402 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 CYP2W1Q8TAV3 490 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 PCDHA7Q9UN72 937 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 IVNS1ABPQ9Y6Y0 642 aa11.78□□□□□ -0.52
THBS3-206ENST00000469769 B4DLN1 442 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 GOLGA6L22H0YM25 854 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 CUTAO60888 179 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 PGK2P07205 417 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 NCLP19338 710 aaKnown RBP11.77□□□□□ -0.53
THBS3-206ENST00000469769 PTMSP20962 102 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 CCND2P30279 289 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 FXR2P51116 673 aaKnown RBP eCLIP11.77□□□□□ -0.53
THBS3-206ENST00000469769 UBE2HP62256 183 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 SP3Q02447 781 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 MAP2K1Q02750 393 aaPredicted RBP11.77□□□□□ -0.53
THBS3-206ENST00000469769 MAP2K5Q13163 448 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 STXBP2Q15833 593 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 POTEDQ86YR6 584 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 CCAR1Q8IX12 1150 aaKnown RBP11.77□□□□□ -0.53
THBS3-206ENST00000469769 IGSF22Q8N9C0 903 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.53
THBS3-206ENST00000469769 SOCS4Q8WXH5 440 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 SLC5A5Q92911 643 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 GPRASP2Q96D09 838 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 MRVI1Q9Y6F6 885 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 CASP8AP2Q9UKL3 1982 aa11.77□□□□□ -0.53
THBS3-206ENST00000469769 ASB14A6NK59 587 aa11.76□□□□□ -0.53
THBS3-206ENST00000469769 SPATA31C2B4DYI2 1134 aa11.76□□□□□ -0.53
THBS3-206ENST00000469769 GPR25O00155 361 aa11.76□□□□□ -0.53
THBS3-206ENST00000469769 MSH4O15457 936 aa11.76□□□□□ -0.53
THBS3-206ENST00000469769 PRPF40AO75400 957 aaKnown RBP11.76□□□□□ -0.53
THBS3-206ENST00000469769 TRPA1O75762 1119 aa11.76□□□□□ -0.53
THBS3-206ENST00000469769 TBC1D8O95759 1140 aa11.76□□□□□ -0.53
THBS3-206ENST00000469769 XRCC5P13010 732 aaKnown RBP11.76□□□□□ -0.53
THBS3-206ENST00000469769 CMA1P23946 247 aa11.76□□□□□ -0.53
THBS3-206ENST00000469769 MARCKSP29966 332 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms