RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, human

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRT-208	ENST00000469602	TEX2	Q8IWB9	1127 aa		11.19	□□□□□ -0.62
SRRT-208	ENST00000469602	OR6J1	Q8NGC5	347 aa		11.19	□□□□□ -0.62
SRRT-208	ENST00000469602	ZNF274	Q96GC6	653 aa	Predicted RBP	11.19	□□□□□ -0.62
SRRT-208	ENST00000469602	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.19	□□□□□ -0.62
SRRT-208	ENST00000469602	NCOA5	Q9HCD5	579 aa	Known RBP	11.19	□□□□□ -0.62
SRRT-208	ENST00000469602	STARD7	Q9NQZ5	370 aa		11.19	□□□□□ -0.62
SRRT-208	ENST00000469602	BARHL2	Q9NY43	387 aa		11.19	□□□□□ -0.62
SRRT-208	ENST00000469602	RBM27	Q9P2N5	1060 aa	Known RBP	11.19	□□□□□ -0.62
SRRT-208	ENST00000469602	ATP11B	Q9Y2G3	1177 aa		11.19	□□□□□ -0.62
SRRT-208	ENST00000469602	LAMA3	Q16787	3333 aa		11.19	□□□□□ -0.62
SRRT-208	ENST00000469602		A6NJR5	290 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	STXBP3	O00186	592 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	PRPF3	O43395	683 aa	Known RBP	11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	SCG2	P13521	617 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	IFNAR1	P17181	557 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	CPT1A	P50416	773 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	ADCY7	P51828	1080 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	ANKRD1	Q15327	319 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	LY6K	Q17RY6	165 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	XRRA1	Q6P2D8	792 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	CXCL17	Q6UXB2	119 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	COPS5	Q92905	334 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	PHKB	Q93100	1093 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	LARP6	Q9BRS8	491 aa	Known RBP	11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	RNF26	Q9BY78	433 aa	Predicted RBP	11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	RIC8A	Q9NPQ8	531 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	DDX41	Q9UJV9	622 aa	Known RBP	11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	MRVI1	Q9Y6F6	885 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	LAMA2	P24043	3122 aa	Known RBP	11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	DOCK5	Q9H7D0	1870 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	LTBP2	Q14767	1821 aa		11.18	□□□□□ -0.62
SRRT-208	ENST00000469602	SCN10A	Q9Y5Y9	1956 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	SPDYE3	A6NKU9	549 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	STAM2	O75886	525 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	CABYR	O75952	493 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	GH1	P01241	217 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	SYN1	P17600	705 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	MRPS9	P82933	396 aa	Known RBP	11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	AKAP17A	Q02040	695 aa	Known RBP	11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	TLE2	Q04725	743 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	ARHGAP1	Q07960	439 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	PKN1	Q16512	942 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	UBE2S	Q16763	222 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	BRDT	Q58F21	947 aa	Predicted RBP	11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	PCNX4	Q63HM2	1172 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	KCNV1	Q6PIU1	500 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	ANKRD33	Q7Z3H0	272 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	EMID1	Q96A84	441 aa	Predicted RBP	11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	VTI1A	Q96AJ9	217 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	ZFP91	Q96JP5	570 aa	Predicted RBP	11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	SLC26A6	Q9BXS9	759 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602	GLT8D2	Q9H1C3	349 aa		11.17	□□□□□ -0.62
SRRT-208	ENST00000469602		A0A0U1RQG5	324 aa	Predicted RBP	11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	SMCO2	A6NFE2	343 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	CPLX1	O14810	134 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	PQBP1	O60828	265 aa	Known RBP	11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	PPFIA3	O75145	1194 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	TGFB3	P10600	412 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	AK2	P54819	239 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	PURA	Q00577	322 aa	Known RBP	11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	STK3	Q13188	491 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	GNPTAB	Q3T906	1256 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	TRIM22	Q8IYM9	498 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	TOX2	Q96NM4	488 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	INPP4A	Q96PE3	977 aa	Predicted RBP	11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	POLR3E	Q9NVU0	708 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	TPCN1	Q9ULQ1	816 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	PCDHA6	Q9UN73	950 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	PCDHA8	Q9Y5H6	950 aa		11.16	□□□□□ -0.62
SRRT-208	ENST00000469602	MROH7	Q68CQ1	1323 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	ESYT2	A0FGR8	921 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	SPATA31C2	B4DYI2	1134 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	ARVCF	O00192	962 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	KPNA6	O60684	536 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	FOS	P01100	380 aa	Predicted RBP	11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	MMP3	P08254	477 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	MYL3	P08590	195 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	UBA1	P22314	1058 aa	Known RBP	11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	ICAM3	P32942	547 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	CLK2	P49760	499 aa	Known RBP	11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	CDK7	P50613	346 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	NEK4	P51957	841 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	SP2	Q02086	613 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	SSRP1	Q08945	709 aa	Known RBP	11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	SCRN1	Q12765	414 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	LAMC2	Q13753	1193 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	CPLX2	Q6PUV4	134 aa	Known RBP	11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	CHRDL2	Q6WN34	429 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	DHX37	Q8IY37	1157 aa	Known RBP	11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	PPTC7	Q8NI37	304 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	AFG1L	Q8WV93	481 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	SEZ6L	Q9BYH1	1024 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	ZMYND12	Q9H0C1	365 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	SLK	Q9H2G2	1235 aa	Predicted RBP	11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	EHMT1	Q9H9B1	1298 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	PDLIM7	Q9NR12	457 aa		11.15	□□□□□ -0.62
SRRT-208	ENST00000469602	RTEL1	Q9NZ71	1219 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms