RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 SMARCA5O60264 1052 aaPredicted RBP4.89□□□□□ -1.63
TPR-204ENST00000469463 KCNJ6P48051 423 aa4.89□□□□□ -1.63
TPR-204ENST00000469463 ZNF143P52747 638 aaPredicted RBP4.89□□□□□ -1.63
TPR-204ENST00000469463 RAB33AQ14088 237 aa4.89□□□□□ -1.63
TPR-204ENST00000469463 BVESQ8NE79 360 aa4.89□□□□□ -1.63
TPR-204ENST00000469463 SMARCC2Q8TAQ2 1214 aa4.89□□□□□ -1.63
TPR-204ENST00000469463 BACE2Q9Y5Z0 518 aa4.89□□□□□ -1.63
TPR-204ENST00000469463 C1QTNF3-AMACRE9PGA6 284 aa4.88□□□□□ -1.63
TPR-204ENST00000469463 SNRPB2P08579 225 aaKnown RBP4.88□□□□□ -1.63
TPR-204ENST00000469463 SCRN1Q12765 414 aa4.88□□□□□ -1.63
TPR-204ENST00000469463 GRB10Q13322 594 aa4.88□□□□□ -1.63
TPR-204ENST00000469463 ZNF227Q86WZ6 799 aa4.88□□□□□ -1.63
TPR-204ENST00000469463 ZNF761Q86XN6 746 aaPredicted RBP4.88□□□□□ -1.63
TPR-204ENST00000469463 BTN2A2Q8WVV5 523 aa4.88□□□□□ -1.63
TPR-204ENST00000469463 DDX1Q92499 740 aaKnown RBP4.88□□□□□ -1.63
TPR-204ENST00000469463 SAMD11Q96NU1 681 aa4.88□□□□□ -1.63
TPR-204ENST00000469463 DUSP10Q9Y6W6 482 aa4.88□□□□□ -1.63
TPR-204ENST00000469463 KLF4O43474 513 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 ITGAVP06756 1048 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 CYP2C8P10632 490 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 PAMP19021 973 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 TNFRSF1AP19438 455 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 KIAA2012Q0VF49 1180 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 SLC10A6Q3KNW5 377 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 MTERF2Q49AM1 385 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 CPZQ66K79 652 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 WWC2Q6AWC2 1192 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 GTF2IRD2BQ6EKJ0 949 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 GTF2IRD2Q86UP8 949 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 DCP2Q8IU60 420 aaKnown RBP4.87□□□□□ -1.63
TPR-204ENST00000469463 LINC00482Q8N8I6 264 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 ADAMTS17Q8TE56 1095 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 ZBTB8AQ96BR9 441 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 RBM15Q96T37 977 aaKnown RBP eCLIP4.87□□□□□ -1.63
TPR-204ENST00000469463 C1QTNF3Q9BXJ4 246 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.87□□□□□ -1.63
TPR-204ENST00000469463 PFDN2Q9UHV9 154 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 RWDD3Q9Y3V2 267 aa4.87□□□□□ -1.63
TPR-204ENST00000469463 C2orf71A6NGG8 1288 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 TBX1O43435 398 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 NPHS1O60500 1241 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 PLATP00750 562 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 ECI1P42126 302 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 IFRD2Q12894 506 aaPredicted RBP4.86□□□□□ -1.63
TPR-204ENST00000469463 FAM26FQ5R3K3 315 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 BORAQ6PGQ7 559 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 FAM124AQ86V42 546 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 TRIM59Q8IWR1 403 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 ARHGEF39Q8N4T4 335 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 USP33Q8TEY7 942 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 RCC1LQ96I51 464 aaKnown RBP4.86□□□□□ -1.63
TPR-204ENST00000469463 DRC1Q96MC2 740 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 SRPK1Q96SB4 655 aaKnown RBP4.86□□□□□ -1.63
TPR-204ENST00000469463 MTA3Q9BTC8 594 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 MCMBPQ9BTE3 642 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 SPATA6Q9NWH7 488 aaPredicted RBP4.86□□□□□ -1.63
TPR-204ENST00000469463 BTG4Q9NY30 223 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 CLEC1BQ9P126 229 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 USP35Q9P2H5 1018 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 EMC9Q9Y3B6 208 aa4.86□□□□□ -1.63
TPR-204ENST00000469463 NPHP3-ACAD11A0A0J9YXS1 232 aa4.85□□□□□ -1.63
TPR-204ENST00000469463 RPL13P26373 211 aaKnown RBP4.85□□□□□ -1.63
TPR-204ENST00000469463 ZXDAP98168 799 aa4.85□□□□□ -1.63
TPR-204ENST00000469463 NBPF6Q5VWK0 638 aa4.85□□□□□ -1.63
TPR-204ENST00000469463 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
TPR-204ENST00000469463 CPNE8Q86YQ8 564 aa4.85□□□□□ -1.63
TPR-204ENST00000469463 LGI4Q8N135 537 aa4.85□□□□□ -1.63
TPR-204ENST00000469463 ARMC5Q96C12 935 aa4.85□□□□□ -1.63
TPR-204ENST00000469463 NBPF4Q96M43 638 aa4.85□□□□□ -1.63
TPR-204ENST00000469463 NOX5Q96PH1 765 aa4.85□□□□□ -1.63
TPR-204ENST00000469463 AP5M1Q9H0R1 490 aa4.85□□□□□ -1.63
TPR-204ENST00000469463 GPRC5CQ9NQ84 441 aa4.85□□□□□ -1.63
TPR-204ENST00000469463 SRRDQ9UH36 339 aa4.85□□□□□ -1.63
TPR-204ENST00000469463 IQCA1LA6NCM1 817 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 MATN3O15232 486 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 PDPK1O15530 556 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 THBDP07204 575 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 SSRP1Q08945 709 aaKnown RBP4.84□□□□□ -1.63
TPR-204ENST00000469463 BMS1Q14692 1282 aaKnown RBP4.84□□□□□ -1.63
TPR-204ENST00000469463 PRSS53Q2L4Q9 553 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 ETV3LQ6ZN32 361 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 ZC3H18Q86VM9 953 aaKnown RBP4.84□□□□□ -1.63
TPR-204ENST00000469463 TTLL6Q8N841 843 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 KYQ8NBH2 561 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 UBXN4Q92575 508 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 LOXL4Q96JB6 756 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 DEPDC7Q96QD5 511 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 C11orf84Q9BUA3 381 aaPredicted RBP4.84□□□□□ -1.63
TPR-204ENST00000469463 EPN3Q9H201 632 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 BCAS3Q9H6U6 928 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 RXFP1Q9HBX9 757 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 SIRPGQ9P1W8 387 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 GULP1Q9UBP9 304 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 FBLN5Q9UBX5 448 aa4.84□□□□□ -1.63
TPR-204ENST00000469463 MEFVO15553 781 aaPredicted RBP4.83□□□□□ -1.64
TPR-204ENST00000469463 PLS3P13797 630 aa4.83□□□□□ -1.64
TPR-204ENST00000469463 THBS2P35442 1172 aa4.83□□□□□ -1.64
TPR-204ENST00000469463 PPP2R2AP63151 447 aa4.83□□□□□ -1.64
TPR-204ENST00000469463 SMAD4Q13485 552 aaKnown RBP4.83□□□□□ -1.64
TPR-204ENST00000469463 HSP90AA2PQ14568 343 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms