RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 C7orf72A4D263 438 aa7.43□□□□□ -1.22
LSM5-209ENST00000468872 IQCA1LA6NCM1 817 aa7.43□□□□□ -1.22
LSM5-209ENST00000468872 AGRPO00253 132 aa7.43□□□□□ -1.22
LSM5-209ENST00000468872 ITGAVP06756 1048 aa7.43□□□□□ -1.22
LSM5-209ENST00000468872 SCRN1Q12765 414 aa7.43□□□□□ -1.22
LSM5-209ENST00000468872 ZNF227Q86WZ6 799 aa7.43□□□□□ -1.22
LSM5-209ENST00000468872 TSPAN17Q96FV3 270 aa7.43□□□□□ -1.22
LSM5-209ENST00000468872 GPRC5CQ9NQ84 441 aa7.43□□□□□ -1.22
LSM5-209ENST00000468872 NCANO14594 1321 aa7.43□□□□□ -1.22
LSM5-209ENST00000468872 ANKRD62A6NC57 917 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 OTOL1A6NHN0 477 aaPredicted RBP7.42□□□□□ -1.22
LSM5-209ENST00000468872 B8ZZF3 427 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 NOP56O00567 594 aaKnown RBP7.42□□□□□ -1.22
LSM5-209ENST00000468872 PRRG2O14669 202 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 FFAR3O14843 346 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 ASGR2P07307 311 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 NCAM1P13591 858 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 PLS3P13797 630 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 FOXO4P98177 505 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 CAP1Q01518 475 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 LONRF2Q1L5Z9 754 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 FOXB2Q5VYV0 432 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 MBLAC2Q68D91 279 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 GTF2IRD2BQ6EKJ0 949 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 GTF2IRD2Q86UP8 949 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 TRIM59Q8IWR1 403 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 SP8Q8IXZ3 490 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 TP53I13Q8NBR0 393 aaPredicted RBP7.42□□□□□ -1.22
LSM5-209ENST00000468872 NETO2Q8NC67 525 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 ZSWIM2Q8NEG5 633 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 ALG3Q92685 438 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 PPP1R14AQ96A00 147 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 BCAS3Q9H6U6 928 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.42□□□□□ -1.22
LSM5-209ENST00000468872 FAN1Q9Y2M0 1017 aa7.42□□□□□ -1.22
LSM5-209ENST00000468872 TBX1O43435 398 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 NPHS1O60500 1241 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 PLA2G1BP04054 148 aaKnown RBP7.41□□□□□ -1.22
LSM5-209ENST00000468872 CAPNS1P04632 268 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 THBDP07204 575 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 MC3RP41968 323 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 PPP2R2AP63151 447 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 TKFCQ3LXA3 575 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 WWC2Q6AWC2 1192 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 C16orf86Q6ZW13 317 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 KIAA0907Q7Z7F0 614 aaPredicted RBP7.41□□□□□ -1.22
LSM5-209ENST00000468872 SYT8Q8NBV8 401 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 FEZF2Q8TBJ5 459 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 USP33Q8TEY7 942 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 RELTQ969Z4 430 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 PEX11GQ96HA9 241 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 MRGPRX3Q96LB0 322 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 MMP19Q99542 508 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 NKX2-4Q9H2Z4 354 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 LUC7LQ9NQ29 371 aaKnown RBP7.41□□□□□ -1.22
LSM5-209ENST00000468872 CYP26B1Q9NR63 512 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 LRP2BPQ9P2M1 347 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 NUDT5Q9UKK9 219 aa7.41□□□□□ -1.22
LSM5-209ENST00000468872 CLSTN1O94985 981 aa7.4□□□□□ -1.22
LSM5-209ENST00000468872 FUCA1P04066 466 aa7.4□□□□□ -1.22
LSM5-209ENST00000468872 PMLP29590 882 aa7.4□□□□□ -1.22
LSM5-209ENST00000468872 NFIXQ14938 502 aa7.4□□□□□ -1.22
LSM5-209ENST00000468872 YOD1Q5VVQ6 348 aaPredicted RBP7.4□□□□□ -1.22
LSM5-209ENST00000468872 FNIP1Q8TF40 1166 aa7.4□□□□□ -1.22
LSM5-209ENST00000468872 EXOC2Q96KP1 924 aa7.4□□□□□ -1.22
LSM5-209ENST00000468872 RTEL1Q9NZ71 1219 aa7.4□□□□□ -1.22
LSM5-209ENST00000468872 ASMTLO95671 621 aa7.39□□□□□ -1.23
LSM5-209ENST00000468872 GRIA2P42262 883 aa7.39□□□□□ -1.23
LSM5-209ENST00000468872 HTRA3P83110 453 aa7.39□□□□□ -1.23
LSM5-209ENST00000468872 CYP4F3Q08477 520 aa7.39□□□□□ -1.23
LSM5-209ENST00000468872 HSP90AA2PQ14568 343 aaPredicted RBP7.39□□□□□ -1.23
LSM5-209ENST00000468872 SLC9A5Q14940 896 aa7.39□□□□□ -1.23
LSM5-209ENST00000468872 VWA3BQ502W6 1294 aa7.39□□□□□ -1.23
LSM5-209ENST00000468872 B3GNT8Q7Z7M8 397 aa7.39□□□□□ -1.23
LSM5-209ENST00000468872 DPF3Q92784 378 aa7.39□□□□□ -1.23
LSM5-209ENST00000468872 PUS7Q96PZ0 661 aaKnown RBP7.39□□□□□ -1.23
LSM5-209ENST00000468872 AARSD1Q9BTE6 412 aaKnown RBP7.39□□□□□ -1.23
LSM5-209ENST00000468872 PMF1-BGLAPU3KQ54 211 aa7.39□□□□□ -1.23
LSM5-209ENST00000468872 TRAV20A0A0B4J274 112 aa7.38□□□□□ -1.23
LSM5-209ENST00000468872 PPP1R12AO14974 1030 aaPredicted RBP7.38□□□□□ -1.23
LSM5-209ENST00000468872 FOXD2O60548 495 aaPredicted RBP7.38□□□□□ -1.23
LSM5-209ENST00000468872 ZBTB7AO95365 584 aa7.38□□□□□ -1.23
LSM5-209ENST00000468872 NTRK1P04629 796 aa7.38□□□□□ -1.23
LSM5-209ENST00000468872 RBM10P98175 930 aaKnown RBP7.38□□□□□ -1.23
LSM5-209ENST00000468872 INF2Q27J81 1249 aa7.38□□□□□ -1.23
LSM5-209ENST00000468872 ZC3H12BQ5HYM0 836 aaKnown RBP7.38□□□□□ -1.23
LSM5-209ENST00000468872 FAM209AQ5JX71 171 aa7.38□□□□□ -1.23
LSM5-209ENST00000468872 PLEKHO2Q8TD55 490 aa7.38□□□□□ -1.23
LSM5-209ENST00000468872 FRS2Q8WU20 508 aa7.38□□□□□ -1.23
LSM5-209ENST00000468872 BTN2A2Q8WVV5 523 aa7.38□□□□□ -1.23
LSM5-209ENST00000468872 KISS1RQ969F8 398 aaPredicted RBP7.38□□□□□ -1.23
LSM5-209ENST00000468872 SIT1Q9Y3P8 196 aa7.38□□□□□ -1.23
LSM5-209ENST00000468872 BUD31P41223 144 aaPredicted RBP7.37□□□□□ -1.23
LSM5-209ENST00000468872 SAPCD2Q86UD0 394 aa7.37□□□□□ -1.23
LSM5-209ENST00000468872 ZDHHC14Q8IZN3 488 aa7.37□□□□□ -1.23
LSM5-209ENST00000468872 NPLOC4Q8TAT6 608 aa7.37□□□□□ -1.23
LSM5-209ENST00000468872 CPA5Q8WXQ8 436 aa7.37□□□□□ -1.23
LSM5-209ENST00000468872 FEZ1Q99689 392 aa7.37□□□□□ -1.23
LSM5-209ENST00000468872 MARCH2Q9P0N8 246 aa7.37□□□□□ -1.23
LSM5-209ENST00000468872 FGFR1P11362 822 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms