RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 ZNF408Q9H9D4 720 aa16.93■□□□□ 0.3
CRAMP1-206ENST00000468839 COL20A1Q9P218 1284 aa16.93■□□□□ 0.3
CRAMP1-206ENST00000468839 PCDHA5Q9Y5H7 936 aa16.93■□□□□ 0.3
CRAMP1-206ENST00000468839 PP2D1A8MPX8 630 aa16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 FOXN1O15353 648 aa16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 ITGBL1O95965 494 aaPredicted RBP16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 RPS6P62753 249 aaKnown RBP16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 ANO6Q4KMQ2 910 aa16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 PRR16Q569H4 304 aa16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 RNF207Q6ZRF8 634 aa16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 NIPA1Q7RTP0 329 aa16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 FAM200AQ8TCP9 573 aa16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 ERCC4Q92889 916 aaPredicted RBP16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 ASCC2Q9H1I8 757 aaPredicted RBP16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 MAGEF1Q9HAY2 307 aa16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 STK24Q9Y6E0 443 aa16.92■□□□□ 0.3
CRAMP1-206ENST00000468839 MEIS1O00470 390 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 BCRP11274 1271 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 OSBPP22059 807 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 STAT6P42226 847 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 IRX3P78415 501 aaPredicted RBP16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 CEP55Q53EZ4 464 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 NAALADL2Q58DX5 795 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 PCNX4Q63HM2 1172 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 CHADLQ6NUI6 762 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 POTEEQ6S8J3 1075 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 RIOX2Q8IUF8 465 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 TRIML1Q8N9V2 468 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 CALML4Q96GE6 196 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 TAAR1Q96RJ0 339 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 MXRA8Q9BRK3 442 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 ACAD9Q9H845 621 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 HOMER2Q9NSB8 354 aa16.91■□□□□ 0.3
CRAMP1-206ENST00000468839 MSH4O15457 936 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 GTPBP6O43824 516 aaPredicted RBP16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 CELF2O95319 508 aaKnown RBP16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 SMC2O95347 1197 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 PRR29P0C7W0 189 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 HERVK_113P62684 666 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 SETQ01105 290 aaPredicted RBP16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 BAATQ14032 418 aaPredicted RBP16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 ZRSR1Q15695 479 aaKnown RBP16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 HYIQ5T013 277 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 KRT79Q5XKE5 535 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 XRRA1Q6P2D8 792 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 SLC30A10Q6XR72 485 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 PLA2G4DQ86XP0 818 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 RNF214Q8ND24 703 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 CYP2W1Q8TAV3 490 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 SMARCE1Q969G3 411 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 DNAJC25Q9H1X3 360 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 BTBD7Q9P203 1132 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 SLC45A1Q9Y2W3 748 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 UBIAD1Q9Y5Z9 338 aa16.9■□□□□ 0.3
CRAMP1-206ENST00000468839 POTEMA6NI47 508 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 MYL1P05976 194 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 PLCG1P19174 1290 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 AFMP43652 599 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 ZNF165P49910 485 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 GTF2A2P52657 109 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 SPIRE1Q08AE8 756 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 DPYDQ12882 1025 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 GRB10Q13322 594 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 NSMFQ6X4W1 530 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 GTF3C2Q8WUA4 911 aaPredicted RBP16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 SLC5A5Q92911 643 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 MS4A4AQ96JQ5 239 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 PNMA5Q96PV4 448 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 MTRQ99707 1265 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 SPATC1LQ9H0A9 340 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 CBX8Q9HC52 389 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 PXMP2Q9NR77 195 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 KBTBD4Q9NVX7 518 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 STK17AQ9UEE5 414 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 FBXO40Q9UH90 709 aa16.89■□□□□ 0.29
CRAMP1-206ENST00000468839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 CNMDO75829 334 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 CETPP11597 493 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 COPB2P35606 906 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 UBXN2AP68543 259 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 SEMA3FQ13275 785 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 PLS1Q14651 629 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 IQCB1Q15051 598 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 PGM5Q15124 567 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 TMEM119Q4V9L6 283 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 CST9Q5W186 159 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 C11orf57Q6ZUT1 292 aaPredicted RBP16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 GRAMD1CQ8IYS0 662 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 RASSF8Q8NHQ8 419 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 SNX29Q8TEQ0 813 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 GSDMAQ96QA5 445 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 RMDN3Q96TC7 470 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 BPIFA3Q9BQP9 254 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 PDCD2LQ9BRP1 358 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 NAT10Q9H0A0 1025 aaKnown RBP16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 CYP39A1Q9NYL5 469 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 MAN1B1Q9UKM7 699 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 KDM3AQ9Y4C1 1321 aa16.88■□□□□ 0.29
CRAMP1-206ENST00000468839 PLXNA1Q9UIW2 1896 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms