RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 CDC37Q16543 378 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-207ENST00000468385 TMCO2Q7Z6W1 182 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-207ENST00000468385 DGKHQ86XP1 1220 aa15.32■□□□□ 0.04
PTPN7-207ENST00000468385 CCDC155Q8N6L0 562 aa15.32■□□□□ 0.04
PTPN7-207ENST00000468385 ESR2Q92731 530 aa15.32■□□□□ 0.04
PTPN7-207ENST00000468385 RNF41Q9H4P4 317 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-207ENST00000468385 ABCB11O95342 1321 aa15.32■□□□□ 0.04
PTPN7-207ENST00000468385 TRIP12Q14669 1992 aaPredicted RBP15.31■□□□□ 0.04
PTPN7-207ENST00000468385 NBNO60934 754 aa15.31■□□□□ 0.04
PTPN7-207ENST00000468385 CXCL10P02778 98 aa15.31■□□□□ 0.04
PTPN7-207ENST00000468385 CASTP20810 708 aaKnown RBP15.31■□□□□ 0.04
PTPN7-207ENST00000468385 DEFB103AP81534 67 aa15.31■□□□□ 0.04
PTPN7-207ENST00000468385 TCTN1Q2MV58 587 aa15.31■□□□□ 0.04
PTPN7-207ENST00000468385 LRRC8DQ7L1W4 858 aa15.31■□□□□ 0.04
PTPN7-207ENST00000468385 CHST3Q7LGC8 479 aa15.31■□□□□ 0.04
PTPN7-207ENST00000468385 NSUN6Q8TEA1 469 aaKnown RBP15.31■□□□□ 0.04
PTPN7-207ENST00000468385 HLA-CQ95604 372 aa15.31■□□□□ 0.04
PTPN7-207ENST00000468385 GTF2IRD1Q9UHL9 959 aa15.31■□□□□ 0.04
PTPN7-207ENST00000468385 DDX41Q9UJV9 622 aaKnown RBP15.31■□□□□ 0.04
PTPN7-207ENST00000468385 COL4A4P53420 1690 aaPredicted RBP15.31■□□□□ 0.04
PTPN7-207ENST00000468385 BDP1A6H8Y1 2624 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 RBAK-RBAKDNI3L0D1 243 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 CKBP12277 381 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 STXBP2Q15833 593 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 QRICH1Q2TAL8 776 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 CNKSR3Q6P9H4 555 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 ADGRF4Q8IZF3 695 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 PNMA1Q8ND90 353 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 GDPD5Q8WTR4 605 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 ANKS1AQ92625 1134 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 EMID1Q96A84 441 aaPredicted RBP15.3■□□□□ 0.04
PTPN7-207ENST00000468385 IWS1Q96ST2 819 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 RMDN3Q96TC7 470 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 EPHX3Q9H6B9 360 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 HDAC6Q9UBN7 1215 aa15.3■□□□□ 0.04
PTPN7-207ENST00000468385 TRIM6-TRIM34B2RNG4 842 aa15.29■□□□□ 0.04
PTPN7-207ENST00000468385 ZNF213O14771 459 aa15.29■□□□□ 0.04
PTPN7-207ENST00000468385 GJB5O95377 273 aa15.29■□□□□ 0.04
PTPN7-207ENST00000468385 PARNO95453 639 aaKnown RBP15.29■□□□□ 0.04
PTPN7-207ENST00000468385 PSEN2P49810 448 aa15.29■□□□□ 0.04
PTPN7-207ENST00000468385 RRP1P56182 461 aaKnown RBP15.29■□□□□ 0.04
PTPN7-207ENST00000468385 HDAC1Q13547 482 aaPredicted RBP15.29■□□□□ 0.04
PTPN7-207ENST00000468385 DGKDQ16760 1214 aa15.29■□□□□ 0.04
PTPN7-207ENST00000468385 TRAF7Q6Q0C0 670 aa15.29■□□□□ 0.04
PTPN7-207ENST00000468385 MCF2L2Q86YR7 1114 aa15.29■□□□□ 0.04
PTPN7-207ENST00000468385 FAM122AQ96E09 287 aa15.29■□□□□ 0.04
PTPN7-207ENST00000468385 LMCD1Q9NZU5 365 aa15.29■□□□□ 0.04
PTPN7-207ENST00000468385 KIAA1217Q5T5P2 1943 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 HAS3O00219 553 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 KDM4AO75164 1064 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 F2P00734 622 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 EIF2AK2P19525 551 aaKnown RBP15.28■□□□□ 0.04
PTPN7-207ENST00000468385 SDSP20132 328 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 NT5C2P49902 561 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 TRIM71Q2Q1W2 868 aaKnown RBP15.28■□□□□ 0.04
PTPN7-207ENST00000468385 ASPRV1Q53RT3 343 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 CCDC178Q5BJE1 867 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 ARHGEF16Q5VV41 709 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 IQCA1Q86XH1 822 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 C7orf31Q8N865 590 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 WNT8BQ93098 351 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 RILPL2Q969X0 211 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 CRBNQ96SW2 442 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 ALG1Q9BT22 464 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 LRFN3Q9BTN0 628 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 KATNAL1Q9BW62 490 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 KAT14Q9H8E8 782 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 JMJD4Q9H9V9 463 aa15.28■□□□□ 0.04
PTPN7-207ENST00000468385 MRPL11Q9Y3B7 192 aaKnown RBP15.28■□□□□ 0.04
PTPN7-207ENST00000468385 ABHD14A-ACY1A0A1B0GW23 586 aa15.27■□□□□ 0.04
PTPN7-207ENST00000468385 EIF3JO75822 258 aaKnown RBP15.27■□□□□ 0.04
PTPN7-207ENST00000468385 ZNF286BP0CG31 522 aa15.27■□□□□ 0.04
PTPN7-207ENST00000468385 MFAP1P55081 439 aaKnown RBP15.27■□□□□ 0.04
PTPN7-207ENST00000468385 PTK7Q13308 1070 aa15.27■□□□□ 0.04
PTPN7-207ENST00000468385 LAMC2Q13753 1193 aa15.27■□□□□ 0.04
PTPN7-207ENST00000468385 MFSD10Q14728 455 aa15.27■□□□□ 0.04
PTPN7-207ENST00000468385 FBXO11Q86XK2 927 aa15.27■□□□□ 0.04
PTPN7-207ENST00000468385 ENAHQ8N8S7 591 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-207ENST00000468385 PPTC7Q8NI37 304 aa15.27■□□□□ 0.04
PTPN7-207ENST00000468385 KHSRPQ92945 711 aaKnown RBP eCLIP15.27■□□□□ 0.04
PTPN7-207ENST00000468385 ZSCAN10Q96SZ4 725 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-207ENST00000468385 RAD9AQ99638 391 aa15.27■□□□□ 0.04
PTPN7-207ENST00000468385 LNPKQ9C0E8 428 aa15.27■□□□□ 0.04
PTPN7-207ENST00000468385 SUGCTQ9HAC7 445 aa15.27■□□□□ 0.04
PTPN7-207ENST00000468385 PXMP2Q9NR77 195 aa15.27■□□□□ 0.04
PTPN7-207ENST00000468385 MRVI1Q9Y6F6 885 aa15.27■□□□□ 0.04
PTPN7-207ENST00000468385 LAMA4Q16363 1823 aa15.27■□□□□ 0.03
PTPN7-207ENST00000468385 LINC01553A4QN01 128 aa15.26■□□□□ 0.03
PTPN7-207ENST00000468385 B4E1Z4 1266 aa15.26■□□□□ 0.03
PTPN7-207ENST00000468385 OPLAHO14841 1288 aa15.26■□□□□ 0.03
PTPN7-207ENST00000468385 NR3C2P08235 984 aa15.26■□□□□ 0.03
PTPN7-207ENST00000468385 HOXD8P13378 290 aaPredicted RBP15.26■□□□□ 0.03
PTPN7-207ENST00000468385 ERVK-21P61565 698 aa15.26■□□□□ 0.03
PTPN7-207ENST00000468385 ZNF200P98182 395 aaPredicted RBP15.26■□□□□ 0.03
PTPN7-207ENST00000468385 GHRHRQ02643 423 aa15.26■□□□□ 0.03
PTPN7-207ENST00000468385 HIC1Q14526 733 aa15.26■□□□□ 0.03
PTPN7-207ENST00000468385 MBTPS1Q14703 1052 aa15.26■□□□□ 0.03
PTPN7-207ENST00000468385 KIAA0753Q2KHM9 967 aa15.26■□□□□ 0.03
PTPN7-207ENST00000468385 ZNF618Q5T7W0 954 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms