RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 VSIG10LQ86VR7 867 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 FAM126BQ8IXS8 530 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 AFG1LQ8WV93 481 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 GPKOWQ92917 476 aaPredicted RBP eCLIP13.32□□□□□ -0.28
CDHR3-205ENST00000468143 BRF1Q92994 677 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 LRCH3Q96II8 777 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 USP26Q9BXU7 913 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 FAM217BQ9NTX9 383 aaPredicted RBP13.32□□□□□ -0.28
CDHR3-205ENST00000468143 POLR3EQ9NVU0 708 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 RTEL1Q9NZ71 1219 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 DDX41Q9UJV9 622 aaKnown RBP13.32□□□□□ -0.28
CDHR3-205ENST00000468143 MRVI1Q9Y6F6 885 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 V9GY48 417 aaPredicted RBP13.32□□□□□ -0.28
CDHR3-205ENST00000468143 A6NJR5 290 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 MEIS2O14770 477 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 TLR3O15455 904 aaKnown RBP13.31□□□□□ -0.28
CDHR3-205ENST00000468143 GH1P01241 217 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 CASTP20810 708 aaKnown RBP13.31□□□□□ -0.28
CDHR3-205ENST00000468143 RPS6KB1P23443 525 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 CCND2P30279 289 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 PURAQ00577 322 aaKnown RBP13.31□□□□□ -0.28
CDHR3-205ENST00000468143 ARHGAP1Q07960 439 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 SHHQ15465 462 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 UBE2SQ16763 222 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 BRDTQ58F21 947 aaPredicted RBP13.31□□□□□ -0.28
CDHR3-205ENST00000468143 SLC43A3Q8NBI5 491 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 CUL5Q93034 780 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 MTG1Q9BT17 334 aaPredicted RBP13.31□□□□□ -0.28
CDHR3-205ENST00000468143 PPP1R12CQ9BZL4 782 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 TRPV6Q9H1D0 765 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 PSTPIP2Q9H939 334 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 RBM28Q9NW13 759 aaKnown RBP13.31□□□□□ -0.28
CDHR3-205ENST00000468143 MROH7Q68CQ1 1323 aa13.31□□□□□ -0.28
CDHR3-205ENST00000468143 PSMA5P28066 241 aa13.3□□□□□ -0.28
CDHR3-205ENST00000468143 ADD1P35611 737 aaKnown RBP13.3□□□□□ -0.28
CDHR3-205ENST00000468143 EPHB4P54760 987 aa13.3□□□□□ -0.28
CDHR3-205ENST00000468143 MRPS9P82933 396 aaKnown RBP13.3□□□□□ -0.28
CDHR3-205ENST00000468143 SP2Q02086 613 aa13.3□□□□□ -0.28
CDHR3-205ENST00000468143 NBPF20Q3BBV1 942 aa13.3□□□□□ -0.28
CDHR3-205ENST00000468143 FAM47CQ5HY64 1035 aa13.3□□□□□ -0.28
CDHR3-205ENST00000468143 C9orf50Q5SZB4 431 aa13.3□□□□□ -0.28
CDHR3-205ENST00000468143 DHX37Q8IY37 1157 aaKnown RBP13.3□□□□□ -0.28
CDHR3-205ENST00000468143 LARP6Q9BRS8 491 aaKnown RBP13.3□□□□□ -0.28
CDHR3-205ENST00000468143 BCAS3Q9H6U6 928 aa13.3□□□□□ -0.28
CDHR3-205ENST00000468143 TBX21Q9UL17 535 aa13.3□□□□□ -0.28
CDHR3-205ENST00000468143 CNTNAP5Q8WYK1 1306 aa13.3□□□□□ -0.28
CDHR3-205ENST00000468143 B4GALT4O60513 344 aa13.29□□□□□ -0.28
CDHR3-205ENST00000468143 PPFIA3O75145 1194 aa13.29□□□□□ -0.28
CDHR3-205ENST00000468143 TIMP1P01033 207 aa13.29□□□□□ -0.28
CDHR3-205ENST00000468143 CD4P01730 458 aa13.29□□□□□ -0.28
CDHR3-205ENST00000468143 MMP3P08254 477 aa13.29□□□□□ -0.28
CDHR3-205ENST00000468143 METAP2P50579 478 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDHR3-205ENST00000468143 FUT2Q10981 343 aa13.29□□□□□ -0.28
CDHR3-205ENST00000468143 WWC2Q6AWC2 1192 aa13.29□□□□□ -0.28
CDHR3-205ENST00000468143 TRMT13Q9NUP7 481 aaKnown RBP13.29□□□□□ -0.28
CDHR3-205ENST00000468143 BAZ2BQ9UIF8 2168 aaKnown RBP13.28□□□□□ -0.28
CDHR3-205ENST00000468143 PIK3CDO00329 1044 aa13.28□□□□□ -0.28
CDHR3-205ENST00000468143 KPNA6O60684 536 aa13.28□□□□□ -0.28
CDHR3-205ENST00000468143 GGPS1O95749 300 aa13.28□□□□□ -0.28
CDHR3-205ENST00000468143 CYP2C18P33260 490 aa13.28□□□□□ -0.28
CDHR3-205ENST00000468143 FPGSQ05932 587 aa13.28□□□□□ -0.28
CDHR3-205ENST00000468143 LAMC2Q13753 1193 aa13.28□□□□□ -0.28
CDHR3-205ENST00000468143 TYW1BQ6NUM6 668 aa13.28□□□□□ -0.28
CDHR3-205ENST00000468143 RUFY3Q7L099 469 aa13.28□□□□□ -0.28
CDHR3-205ENST00000468143 UPF3BQ9BZI7 483 aaKnown RBP13.28□□□□□ -0.28
CDHR3-205ENST00000468143 ALDH8A1Q9H2A2 487 aaPredicted RBP13.28□□□□□ -0.28
CDHR3-205ENST00000468143 ZSWIM6Q9HCJ5 1215 aa13.28□□□□□ -0.28
CDHR3-205ENST00000468143 UMODL1Q5DID0 1318 aa13.28□□□□□ -0.28
CDHR3-205ENST00000468143 MYH6P13533 1939 aa13.27□□□□□ -0.28
CDHR3-205ENST00000468143 CEP290O15078 2479 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 EPB41L2O43491 1005 aaKnown RBP13.27□□□□□ -0.29
CDHR3-205ENST00000468143 CYP2C9P11712 490 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 CSF2RAP15509 400 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 UBA1P22314 1058 aaKnown RBP13.27□□□□□ -0.29
CDHR3-205ENST00000468143 NAPAP54920 295 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 CCL23P55773 120 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 CCT2P78371 535 aaKnown RBP13.27□□□□□ -0.29
CDHR3-205ENST00000468143 HSDL1Q3SXM5 330 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 LRIT3Q3SXY7 679 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 CELF3Q5SZQ8 465 aaKnown RBP13.27□□□□□ -0.29
CDHR3-205ENST00000468143 MYSM1Q5VVJ2 828 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 MFSD5Q6N075 450 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 KCNV1Q6PIU1 500 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 PGBD1Q96JS3 809 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 SPATA33Q96N06 139 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 ALG1Q9BT22 464 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 MLXIPQ9HAP2 919 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 PCDHA6Q9UN73 950 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 PCDHA8Q9Y5H6 950 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 CYP46A1Q9Y6A2 500 aa13.27□□□□□ -0.29
CDHR3-205ENST00000468143 CCDC196A0A1B0GTZ2 297 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 SMCO2A6NFE2 343 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 SPDYE3A6NKU9 549 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 SPATA31C2B4DYI2 1134 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 STXBP3O00186 592 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 ZNF286BP0CG31 522 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 ACRP10323 421 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 PDIA3P30101 505 aaKnown RBP13.26□□□□□ -0.29
CDHR3-205ENST00000468143 SEMA3FQ13275 785 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 TOB2Q14106 344 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms