RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 SEZ6LQ9BYH1 1024 aa10.14□□□□□ -0.79
LCA5-203ENST00000467898 RPAP3Q9H6T3 665 aaPredicted RBP10.14□□□□□ -0.79
LCA5-203ENST00000467898 SCOCQ9UIL1 159 aa10.14□□□□□ -0.79
LCA5-203ENST00000467898 BICDL2A1A5D9 508 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 HSF2BPO75031 334 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 GUCY2FP51841 1108 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 CKAP4Q07065 602 aaKnown RBP10.13□□□□□ -0.79
LCA5-203ENST00000467898 PPIDQ08752 370 aaKnown RBP10.13□□□□□ -0.79
LCA5-203ENST00000467898 LSAMPQ13449 338 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 COL19A1Q14993 1142 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 TTMPQ5BVD1 217 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 UBE2Q1Q7Z7E8 422 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 ATRIPQ8WXE1 791 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 GFM2Q969S9 779 aaKnown RBP10.13□□□□□ -0.79
LCA5-203ENST00000467898 KAZALD1Q96I82 304 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 PDP2Q9P2J9 529 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 ZMAT5Q9UDW3 170 aaKnown RBP10.13□□□□□ -0.79
LCA5-203ENST00000467898 CHMP3Q9Y3E7 222 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 TIMM22Q9Y584 194 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 COL22A1Q8NFW1 1626 aaPredicted RBP10.13□□□□□ -0.79
LCA5-203ENST00000467898 AOX1Q06278 1338 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 GMNCA6NCL1 334 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 RAB11FIP3O75154 756 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 SUPT3HO75486 399 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 LDHAP00338 332 aaKnown RBP10.13□□□□□ -0.79
LCA5-203ENST00000467898 HSPA8P11142 646 aaKnown RBP10.13□□□□□ -0.79
LCA5-203ENST00000467898 FANCCQ00597 558 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 DMPKQ09013 629 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 SUZ12Q15022 739 aaKnown RBP10.13□□□□□ -0.79
LCA5-203ENST00000467898 CWF19L2Q2TBE0 894 aaKnown RBP10.13□□□□□ -0.79
LCA5-203ENST00000467898 TMEM154Q6P9G4 183 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 EMBQ6PCB8 327 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 C11orf74Q86VG3 221 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 CD302Q8IX05 232 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 PANX2Q96RD6 677 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 GINM1Q9NU53 330 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 MKS1Q9NXB0 559 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 BCL9O00512 1426 aa10.13□□□□□ -0.79
LCA5-203ENST00000467898 COL16A1Q07092 1604 aaPredicted RBP10.13□□□□□ -0.79
LCA5-203ENST00000467898 VPS37CA5D8V6 355 aaPredicted RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 E7EVH7 732 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 IGKV5-2P06315 115 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 MATR3P43243 847 aaKnown RBP eCLIP10.12□□□□□ -0.79
LCA5-203ENST00000467898 ZNF132P52740 706 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 GRAMD4Q6IC98 578 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 IQCEQ6IPM2 695 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 DQX1Q8TE96 717 aaKnown RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 RNPC3Q96LT9 517 aaKnown RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 HNRNPABQ99729 332 aaKnown RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 PRDM11Q9NQV5 511 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.12□□□□□ -0.79
LCA5-203ENST00000467898 CTTNBP2NLQ9P2B4 639 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 SSX2IPQ9Y2D8 614 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 WNK3Q9BYP7 1800 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 TBCAO75347 108 aaKnown RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 CPA3P15088 417 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 NR1D1P20393 614 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 ENDOUP21128 410 aaKnown RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 VARSP26640 1264 aaKnown RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 CTAG1AP78358 180 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 CDK17Q00537 523 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 TBX2Q13207 712 aaPredicted RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 NKX1-1Q15270 411 aaPredicted RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 GKAP1Q5VSY0 366 aaPredicted RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 BPHLQ86WA6 291 aaPredicted RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 RASEFQ8IZ41 740 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 NOA1Q8NC60 698 aaKnown RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 LENG1Q96BZ8 264 aaPredicted RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 IQCDQ96DY2 449 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 HIC2Q96JB3 615 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 SEC16BQ96JE7 1060 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 INIPQ9NRY2 104 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 C6orf203Q9P0P8 240 aaPredicted RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 KIAA1522Q9P206 1035 aaPredicted RBP10.12□□□□□ -0.79
LCA5-203ENST00000467898 CFAP45Q9UL16 551 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 TNS2Q63HR2 1409 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 PLCH1Q4KWH8 1693 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 ROBO1Q9Y6N7 1651 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 BTBD19C9JJ37 291 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 PAEPP09466 180 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 ADRM1Q16186 407 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 SPDYCQ5MJ68 293 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 RUFY4Q6ZNE9 571 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 CCDC83Q8IWF9 413 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 RHPN1Q8TCX5 695 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 PGBD1Q96JS3 809 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 FTOQ9C0B1 505 aaKnown RBP eCLIP10.12□□□□□ -0.79
LCA5-203ENST00000467898 SLC7A5P2Q9GIP4 190 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 LEMD3Q9Y2U8 911 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 FADS3Q9Y5Q0 445 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 TJP1Q07157 1748 aa10.12□□□□□ -0.79
LCA5-203ENST00000467898 PCDH11XQ9BZA7 1347 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 PCDH11YQ9BZA8 1340 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 IFIT3O14879 490 aaKnown RBP10.11□□□□□ -0.79
LCA5-203ENST00000467898 MAP3K13O43283 966 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 SNRPA1P09661 255 aaKnown RBP10.11□□□□□ -0.79
LCA5-203ENST00000467898 AMPD2Q01433 879 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 MAP3K12Q12852 859 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 SAFBQ15424 915 aaKnown RBP eCLIP10.11□□□□□ -0.79
LCA5-203ENST00000467898 SPRED3Q2MJR0 410 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms