RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 ECM1Q16610 540 aa21.12■□□□□ 0.97
CHRNA4-203ENST00000467563 PLA2G4DQ86XP0 818 aa21.12■□□□□ 0.97
CHRNA4-203ENST00000467563 TRIM5Q9C035 493 aa21.12■□□□□ 0.97
CHRNA4-203ENST00000467563 HSD3B7Q9H2F3 369 aa21.12■□□□□ 0.97
CHRNA4-203ENST00000467563 MAGEF1Q9HAY2 307 aa21.12■□□□□ 0.97
CHRNA4-203ENST00000467563 BLOC1S4Q9NUP1 217 aa21.12■□□□□ 0.97
CHRNA4-203ENST00000467563 STAT3P40763 770 aa21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 ZNF75DP51815 510 aa21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 MYL5Q02045 173 aa21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 FMR1Q06787 632 aaKnown RBP eCLIP21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 FAM20AQ96MK3 541 aa21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 TRERF1Q96PN7 1200 aa21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 EHMT1Q9H9B1 1298 aa21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 RPN1P04843 607 aaKnown RBP21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 CD44P16070 742 aaKnown RBP21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 TMEM119Q4V9L6 283 aa21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 TREML2Q5T2D2 321 aa21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 SMYD4Q8IYR2 804 aaPredicted RBP21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 ANKRD13AQ8IZ07 590 aa21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 CDK5RAP3Q96JB5 506 aa21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 MED15Q96RN5 788 aa21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 PNMA2Q9UL42 364 aa21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 ZNF214Q9UL59 606 aaPredicted RBP21.11■□□□□ 0.97
CHRNA4-203ENST00000467563 RPTORQ8N122 1335 aa21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 IRF6O14896 467 aa21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 MYL1P05976 194 aa21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 POTEIP0CG38 1075 aa21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 POTEJP0CG39 1038 aa21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 TTLL12Q14166 644 aaPredicted RBP21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 TMEM132BQ14DG7 1078 aa21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 KCNK18Q7Z418 384 aa21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 PNMA8AQ86V59 439 aaPredicted RBP21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 SYTL5Q8TDW5 730 aaPredicted RBP21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 ZFP91Q96JP5 570 aaPredicted RBP21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 STK17AQ9UEE5 414 aa21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 DACH1Q9UI36 760 aa21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 PTPRFP10586 1907 aa21.1■□□□□ 0.97
CHRNA4-203ENST00000467563 SPDYE16A6NNV3 312 aaPredicted RBP21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 RPS6P62753 249 aaKnown RBP21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 OTUD5Q96G74 571 aa21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 COL11A1P12107 1806 aaPredicted RBP21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 KLRC4O43908 158 aa21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 OAZ1P54368 228 aa21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 PPATQ06203 517 aa21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 CEP55Q53EZ4 464 aa21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 SNRNP48Q6IEG0 339 aaKnown RBP21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 ERO1BQ86YB8 467 aa21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 TRIM9Q9C026 710 aa21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 RNF146Q9NTX7 359 aa21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 VAV3Q9UKW4 847 aa21.09■□□□□ 0.97
CHRNA4-203ENST00000467563 PPP1R3GB7ZBB8 358 aa21.08■□□□□ 0.97
CHRNA4-203ENST00000467563 CCT6AP40227 531 aaKnown RBP21.08■□□□□ 0.97
CHRNA4-203ENST00000467563 DHX8Q14562 1220 aaKnown RBP21.08■□□□□ 0.97
CHRNA4-203ENST00000467563 HYIQ5T013 277 aa21.08■□□□□ 0.97
CHRNA4-203ENST00000467563 SLC30A10Q6XR72 485 aa21.08■□□□□ 0.97
CHRNA4-203ENST00000467563 IL31RAQ8NI17 732 aa21.08■□□□□ 0.97
CHRNA4-203ENST00000467563 LARP4BQ92615 738 aaKnown RBP21.08■□□□□ 0.97
CHRNA4-203ENST00000467563 HOXC10Q9NYD6 342 aa21.08■□□□□ 0.97
CHRNA4-203ENST00000467563 MAP3K20Q9NYL2 800 aaKnown RBP21.08■□□□□ 0.97
CHRNA4-203ENST00000467563 MCM6Q14566 821 aa21.08■□□□□ 0.96
CHRNA4-203ENST00000467563 TRMT44Q8IYL2 757 aaKnown RBP21.08■□□□□ 0.96
CHRNA4-203ENST00000467563 RAD54LQ92698 747 aa21.08■□□□□ 0.96
CHRNA4-203ENST00000467563 C7orf25Q9BPX7 421 aa21.08■□□□□ 0.96
CHRNA4-203ENST00000467563 RMND1Q9NWS8 449 aa21.08■□□□□ 0.96
CHRNA4-203ENST00000467563 MYPNQ86TC9 1320 aa21.07■□□□□ 0.96
CHRNA4-203ENST00000467563 SPDYE5A6NIY4 337 aa21.07■□□□□ 0.96
CHRNA4-203ENST00000467563 MEIS1O00470 390 aa21.07■□□□□ 0.96
CHRNA4-203ENST00000467563 ATP2A1O14983 1001 aa21.07■□□□□ 0.96
CHRNA4-203ENST00000467563 ERCC5P28715 1186 aaPredicted RBP21.07■□□□□ 0.96
CHRNA4-203ENST00000467563 KMT5BQ4FZB7 885 aa21.07■□□□□ 0.96
CHRNA4-203ENST00000467563 HS1BP3Q53T59 392 aa21.07■□□□□ 0.96
CHRNA4-203ENST00000467563 SV2BQ7L1I2 683 aa21.07■□□□□ 0.96
CHRNA4-203ENST00000467563 SAMD3Q8N6K7 520 aa21.07■□□□□ 0.96
CHRNA4-203ENST00000467563 TAAR1Q96RJ0 339 aa21.07■□□□□ 0.96
CHRNA4-203ENST00000467563 FANCLQ9NW38 375 aa21.07■□□□□ 0.96
CHRNA4-203ENST00000467563 A0A0G2JLL6 359 aaPredicted RBP21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 PTMAP06454 111 aaKnown RBP21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 ATP1A3P13637 1013 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 TPM4P67936 248 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 KCNB1Q14721 858 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 ZNF658Q5TYW1 1059 aaPredicted RBP21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 NCAPH2Q6IBW4 605 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 POTEEQ6S8J3 1075 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 NSMFQ6X4W1 530 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 RNF207Q6ZRF8 634 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 PRRT2Q7Z6L0 340 aaPredicted RBP21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 SPC24Q8NBT2 197 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 ENOX1Q8TC92 643 aaKnown RBP21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 CLEC11AQ9Y240 323 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 KDM3AQ9Y4C1 1321 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 RBBP6Q7Z6E9 1792 aaKnown RBP21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 POTEB3A0JP26 581 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 MED24O75448 989 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 ARP10275 920 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 ITGB5P18084 799 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 AMPD3Q01432 767 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 CT47A1Q5JQC4 288 aaPredicted RBP21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 KLHL10Q6JEL2 608 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 POTEBQ6S5H4 581 aa21.06■□□□□ 0.96
CHRNA4-203ENST00000467563 SLC5A5Q92911 643 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms