RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 PABPC4Q13310 644 aaKnown RBP eCLIP10.63□□□□□ -0.711e-11■■■□□ 16.7
PRPF3-202ENST00000467329 DPCR1Q3MIW9 517 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 CNNM4Q6P4Q7 775 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 DLK2Q6UY11 383 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 FCHSD1Q86WN1 690 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 RASSF8Q8NHQ8 419 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 TBC1D5Q92609 795 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 LRRC27Q9C0I9 530 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 RNF146Q9NTX7 359 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 SMTNL1A8MU46 457 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 FAM86B1E9PN63 330 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 FAM86B2P0C5J1 330 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 PLCG1P19174 1290 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 COPB2P35606 906 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 PRR16Q569H4 304 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 MUM1L1Q5H9M0 696 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 PCNX4Q63HM2 1172 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 SAMD1Q6SPF0 538 aaPredicted RBP10.63□□□□□ -0.71
PRPF3-202ENST00000467329 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.63□□□□□ -0.71
PRPF3-202ENST00000467329 CPXCR1Q8N123 301 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 CHST13Q8NET6 341 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 SLC5A5Q92911 643 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 CLMNQ96JQ2 1002 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 NT5C3AQ9H0P0 336 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 AGTPBP1Q9UPW5 1226 aa10.63□□□□□ -0.71
PRPF3-202ENST00000467329 MEIS1O00470 390 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 SOCS7O14512 581 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 AMPD3Q01432 767 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 GRB10Q13322 594 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 KCNB1Q14721 858 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 TMEM132BQ14DG7 1078 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 CEP55Q53EZ4 464 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 SNRNP48Q6IEG0 339 aaKnown RBP10.62□□□□□ -0.71
PRPF3-202ENST00000467329 SARM1Q6SZW1 724 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 ERMNQ8TAM6 284 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 SNX29Q8TEQ0 813 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 GTF3C2Q8WUA4 911 aaPredicted RBP10.62□□□□□ -0.71
PRPF3-202ENST00000467329 ERCC4Q92889 916 aaPredicted RBP10.62□□□□□ -0.71
PRPF3-202ENST00000467329 OTUD5Q96G74 571 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 CDK5RAP3Q96JB5 506 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 PNMA5Q96PV4 448 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 ACAD9Q9H845 621 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 FBXO40Q9UH90 709 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 CLEC11AQ9Y240 323 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 SMCHD1A6NHR9 2005 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 GOLGA6L19H0YKK7 550 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 MSH4O15457 936 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 MUTP22033 750 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 TPM4P67936 248 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 SPIRE1Q08AE8 756 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 HAUS3Q68CZ6 603 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 RNF207Q6ZRF8 634 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 LUZP1Q86V48 1076 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 PLA2G4DQ86XP0 818 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 DHX40Q8IX18 779 aaKnown RBP10.62□□□□□ -0.71
PRPF3-202ENST00000467329 GRAMD1CQ8IYS0 662 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 C7orf25Q9BPX7 421 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 MXRA8Q9BRK3 442 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 COL20A1Q9P218 1284 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 VAV3Q9UKW4 847 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 SLC45A1Q9Y2W3 748 aa10.62□□□□□ -0.71
PRPF3-202ENST00000467329 BIN1O00499 593 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 AFMP43652 599 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 SNAPC2Q13487 334 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 MOGSQ13724 837 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 TREML2Q5T2D2 321 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 GADL1Q6ZQY3 521 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 RIOX2Q8IUF8 465 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 CNKSR2Q8WXI2 1034 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 OPTNQ96CV9 577 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 RIT2Q99578 217 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 MTRQ99707 1265 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 UBIAD1Q9Y5Z9 338 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 BECN2A8MW95 431 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 OSBPP22059 807 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 ERCC5P28715 1186 aaPredicted RBP10.61□□□□□ -0.71
PRPF3-202ENST00000467329 CDC25AP30304 524 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 STAT3P40763 770 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 RPS6P62753 249 aaKnown RBP10.61□□□□□ -0.71
PRPF3-202ENST00000467329 PPP2R5CQ13362 524 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 RAD54LQ92698 747 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 CCDC47Q96A33 483 aaKnown RBP10.61□□□□□ -0.71
PRPF3-202ENST00000467329 WNK4Q96J92 1243 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 POLR3CQ9BUI4 534 aaPredicted RBP10.61□□□□□ -0.71
PRPF3-202ENST00000467329 WDR11Q9BZH6 1224 aa10.61□□□□□ -0.71
PRPF3-202ENST00000467329 PFASO15067 1338 aa10.6□□□□□ -0.71
PRPF3-202ENST00000467329 POTEMA6NI47 508 aa10.6□□□□□ -0.71
PRPF3-202ENST00000467329 PSMD10O75832 226 aa10.6□□□□□ -0.71
PRPF3-202ENST00000467329 STAM2O75886 525 aa10.6□□□□□ -0.71
PRPF3-202ENST00000467329 RPN1P04843 607 aaKnown RBP10.6□□□□□ -0.71
PRPF3-202ENST00000467329 IRX3P78415 501 aaPredicted RBP10.6□□□□□ -0.71
PRPF3-202ENST00000467329 SLC30A10Q6XR72 485 aa10.6□□□□□ -0.71
PRPF3-202ENST00000467329 MOB2Q70IA6 237 aa10.6□□□□□ -0.71
PRPF3-202ENST00000467329 SLC10A4Q96EP9 437 aa10.6□□□□□ -0.71
PRPF3-202ENST00000467329 JADE2Q9NQC1 790 aa10.6□□□□□ -0.71
PRPF3-202ENST00000467329 PXMP2Q9NR77 195 aa10.6□□□□□ -0.71
PRPF3-202ENST00000467329 BLOC1S4Q9NUP1 217 aa10.6□□□□□ -0.71
PRPF3-202ENST00000467329 DCAF8L1A6NGE4 600 aa10.6□□□□□ -0.71
PRPF3-202ENST00000467329 BMP6P22004 513 aa10.6□□□□□ -0.71
PRPF3-202ENST00000467329 CCT6AP40227 531 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms