RNA–Protein interactions for RNA: ENST00000466881.1

PLOD3-211, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-211ENST00000466881 ZNF408Q9H9D4 720 aa13.78□□□□□ -0.2
PLOD3-211ENST00000466881 HMX1Q9NP08 348 aaPredicted RBP13.78□□□□□ -0.2
PLOD3-211ENST00000466881 RIC8AQ9NPQ8 531 aa13.78□□□□□ -0.2
PLOD3-211ENST00000466881 FBXO28Q9NVF7 368 aa13.78□□□□□ -0.2
PLOD3-211ENST00000466881 TMEM260Q9NX78 707 aa13.78□□□□□ -0.2
PLOD3-211ENST00000466881 PASKQ96RG2 1323 aa13.78□□□□□ -0.2
PLOD3-211ENST00000466881 PLA2G6O60733 806 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 PPP6R2O75170 966 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 FLOT1O75955 427 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 DXOO77932 396 aaKnown RBP13.77□□□□□ -0.21
PLOD3-211ENST00000466881 TRAPPC10P48553 1259 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 HMGCS2P54868 508 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 NONOQ15233 471 aaKnown RBP eCLIP13.77□□□□□ -0.21
PLOD3-211ENST00000466881 PTPAQ15257 358 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 INF2Q27J81 1249 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 MAP1SQ66K74 1059 aaPredicted RBP13.77□□□□□ -0.21
PLOD3-211ENST00000466881 ADALQ6DHV7 355 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.77□□□□□ -0.21
PLOD3-211ENST00000466881 LDHDQ86WU2 507 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 FSIP1Q8NA03 581 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 LRRN4Q8WUT4 740 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 SLF1Q9BQI6 1058 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 GLT8D2Q9H1C3 349 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 ELP3Q9H9T3 547 aa13.77□□□□□ -0.21
PLOD3-211ENST00000466881 M0R2N6 131 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 CUTAO60888 179 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 BMP15O95972 392 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 JUNDP17535 347 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 LIG1P18858 919 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 VCAM1P19320 739 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 MCM7P33993 719 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 MMP16P51512 607 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 MAP2K1Q02750 393 aaPredicted RBP13.76□□□□□ -0.21
PLOD3-211ENST00000466881 UBE2SQ16763 222 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 MOB2Q70IA6 237 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 ANKRD13AQ8IZ07 590 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 PRPF38AQ8NAV1 312 aaKnown RBP13.76□□□□□ -0.21
PLOD3-211ENST00000466881 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.76□□□□□ -0.21
PLOD3-211ENST00000466881 TMEM63CQ9P1W3 806 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 SNCAIPQ9Y6H5 919 aa13.76□□□□□ -0.21
PLOD3-211ENST00000466881 ZBED4O75132 1171 aa13.75□□□□□ -0.21
PLOD3-211ENST00000466881 RGS19P49795 217 aa13.75□□□□□ -0.21
PLOD3-211ENST00000466881 KCNC4Q03721 635 aa13.75□□□□□ -0.21
PLOD3-211ENST00000466881 ZSCAN23Q3MJ62 389 aa13.75□□□□□ -0.21
PLOD3-211ENST00000466881 CCDC183Q5T5S1 534 aa13.75□□□□□ -0.21
PLOD3-211ENST00000466881 MRPS27Q92552 414 aaKnown RBP13.75□□□□□ -0.21
PLOD3-211ENST00000466881 RANBP17Q9H2T7 1088 aaKnown RBP13.75□□□□□ -0.21
PLOD3-211ENST00000466881 AFG3L2Q9Y4W6 797 aa13.75□□□□□ -0.21
PLOD3-211ENST00000466881 PDE4DIPQ5VU43 2346 aa13.75□□□□□ -0.21
PLOD3-211ENST00000466881 A0A1W2PQ27 194 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 A0A1W2PQ64 194 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 A0A1W2PQD8 194 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 TRAF5O00463 557 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 TAL1P17542 331 aaPredicted RBP13.74□□□□□ -0.21
PLOD3-211ENST00000466881 LETM2Q2VYF4 491 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 LYPD8Q6UX82 237 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 NEK8Q86SG6 692 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 CPXCR1Q8N123 301 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 TBCKQ8TEA7 893 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 CLMNQ96JQ2 1002 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 CLIC6Q96NY7 704 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 DACT1Q9NYF0 836 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 CCPG1Q9ULG6 757 aa13.74□□□□□ -0.21
PLOD3-211ENST00000466881 MRPL11Q9Y3B7 192 aaKnown RBP13.74□□□□□ -0.21
PLOD3-211ENST00000466881 A0A1B0GVL5 298 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 WNT7AO00755 349 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 CCNT1O60563 726 aaKnown RBP13.73□□□□□ -0.21
PLOD3-211ENST00000466881 LETM1O95202 739 aaPredicted RBP13.73□□□□□ -0.21
PLOD3-211ENST00000466881 S1PR4O95977 384 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 CMA1P23946 247 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 DEFB115Q30KQ5 88 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 MCTP2Q6DN12 878 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 USP17L6PQ6QN14 398 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 GADL1Q6ZQY3 521 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 ERO1BQ86YB8 467 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 NUP62CLQ9H1M0 184 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 GOLPH3LQ9H4A5 285 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 DDX19AQ9NUU7 478 aaKnown RBP13.73□□□□□ -0.21
PLOD3-211ENST00000466881 FBXO2Q9UK22 296 aaPredicted RBP13.73□□□□□ -0.21
PLOD3-211ENST00000466881 PPP1R9AQ9ULJ8 1098 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 MRVI1Q9Y6F6 885 aa13.73□□□□□ -0.21
PLOD3-211ENST00000466881 ABCB11O95342 1321 aa13.72□□□□□ -0.21
PLOD3-211ENST00000466881 SYCE3A1L190 88 aa13.72□□□□□ -0.21
PLOD3-211ENST00000466881 SPDYE3A6NKU9 549 aa13.72□□□□□ -0.21
PLOD3-211ENST00000466881 KINO60870 393 aaKnown RBP13.72□□□□□ -0.21
PLOD3-211ENST00000466881 CFBP00751 764 aa13.72□□□□□ -0.21
PLOD3-211ENST00000466881 ICAM1P05362 532 aa13.72□□□□□ -0.21
PLOD3-211ENST00000466881 FAM160A1Q05DH4 1040 aa13.72□□□□□ -0.21
PLOD3-211ENST00000466881 PPATQ06203 517 aa13.72□□□□□ -0.21
PLOD3-211ENST00000466881 CAMK4Q16566 473 aa13.72□□□□□ -0.21
PLOD3-211ENST00000466881 AXDND1Q5T1B0 1012 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms