RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 INCENPQ9NQS7 918 aa17.13■□□□□ 0.33
ABCF3-206ENST00000466742 SAMSN1Q9NSI8 373 aaKnown RBP17.13■□□□□ 0.33
ABCF3-206ENST00000466742 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.13■□□□□ 0.33
ABCF3-206ENST00000466742 SUGT1Q9Y2Z0 365 aa17.13■□□□□ 0.33
ABCF3-206ENST00000466742 KLF18A0A0U1RQI7 1052 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 MINDY4BA8MYZ0 360 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 ANP32DO95626 131 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 FGRP09769 529 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 FAM163BP0C2L3 166 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 GCLCP48506 637 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-206ENST00000466742 MDM2Q00987 491 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-206ENST00000466742 ROR2Q01974 943 aaKnown RBP17.12■□□□□ 0.33
ABCF3-206ENST00000466742 CYP26C1Q6V0L0 522 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 SGMS1Q86VZ5 419 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 FAM163AQ96GL9 167 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-206ENST00000466742 ZIM3Q96PE6 472 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 YIPF3Q9GZM5 350 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 C10orf71Q711Q0 1435 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 SRGAP2O75044 1071 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 PPP6R2O75170 966 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 NR1D1P20393 614 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 LIFRP42702 1097 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 BLMHQ13867 455 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 DIXDC1Q155Q3 683 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 SBK1Q52WX2 424 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 SHC4Q6S5L8 630 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 CD302Q8IX05 232 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 C7orf43Q8WVR3 580 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 RTFDC1Q9BY42 306 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-206ENST00000466742 HAUS4Q9H6D7 363 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 LMCD1Q9NZU5 365 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 HPS5Q9UPZ3 1129 aa17.12■□□□□ 0.33
ABCF3-206ENST00000466742 ITIH6Q6UXX5 1313 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 E7EVH7 732 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 ENC1O14682 589 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 GYPCP04921 128 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 LINGO3P0C6S8 592 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 MKRN4PQ13434 485 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-206ENST00000466742 LAMB3Q13751 1172 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 NT5DC1Q5TFE4 455 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 RESP18Q5W5W9 173 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 NFXL1Q6ZNB6 911 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 SLF2Q8IX21 1173 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 TBC1D31Q96DN5 1066 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 MED15Q96RN5 788 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 RGL1Q9NZL6 768 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 ARPP21Q9UBL0 812 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-206ENST00000466742 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 KIAA1551Q9HCM1 1747 aa17.11■□□□□ 0.33
ABCF3-206ENST00000466742 USP17L12C9JPN9 530 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 USP17L21D6R901 530 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 PYGLP06737 847 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 TNFRSF8P28908 595 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 GTF2IP78347 998 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 GLE1Q53GS7 698 aaKnown RBP17.1■□□□□ 0.33
ABCF3-206ENST00000466742 KCTD16Q68DU8 428 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 CC2D2BQ6DHV5 1058 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 ZNF570Q96NI8 536 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 ALS2CR12Q96Q35 445 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 KDM4CQ9H3R0 1056 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 ADD3Q9UEY8 706 aaKnown RBP17.1■□□□□ 0.33
ABCF3-206ENST00000466742 GPR75-ASB3A0A0A6YYF3 556 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 IMPDH2P12268 514 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 FXR1P51114 621 aaKnown RBP eCLIP17.1■□□□□ 0.33
ABCF3-206ENST00000466742 ITIH3Q06033 890 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 LONRF3Q496Y0 759 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 IQCKQ8N0W5 287 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 JAKMIP2Q96AA8 810 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 CAPZA3Q96KX2 299 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 LY9Q9HBG7 655 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 NCOA5Q9HCD5 579 aaKnown RBP17.1■□□□□ 0.33
ABCF3-206ENST00000466742 BAIAP2L1Q9UHR4 511 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 GUCA1BQ9UMX6 200 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 GAKO14976 1311 aa17.1■□□□□ 0.33
ABCF3-206ENST00000466742 SPDYE3A6NKU9 549 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 PDE2AO00408 941 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-206ENST00000466742 ERCC5P28715 1186 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-206ENST00000466742 TMEM67Q5HYA8 995 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 ARMC3Q5W041 872 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 PODNQ7Z5L7 613 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 NUP133Q8WUM0 1156 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 ZFAND2BQ8WV99 257 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 ESR2Q92731 530 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 L3MBTL3Q96JM7 780 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-206ENST00000466742 SENP2Q9HC62 589 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 PAPOLBQ9NRJ5 636 aaKnown RBP17.09■□□□□ 0.33
ABCF3-206ENST00000466742 CCDC88AQ3V6T2 1871 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 GMNCA6NCL1 334 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 C5orf60A6NFR6 353 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 PPIP5K2O43314 1243 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 MARCKSP29966 332 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-206ENST00000466742 SARSP49591 514 aaKnown RBP17.09■□□□□ 0.33
ABCF3-206ENST00000466742 MORC3Q14149 939 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 RRP12Q5JTH9 1297 aaKnown RBP17.09■□□□□ 0.33
ABCF3-206ENST00000466742 MTHFD1LQ6UB35 978 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 ZNF662Q6ZS27 426 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 ZNF572Q7Z3I7 529 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-206ENST00000466742 SLF1Q9BQI6 1058 aa17.09■□□□□ 0.33
ABCF3-206ENST00000466742 IFIT3O14879 490 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms