RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 TM6SF1Q9BZW5 370 aa8.08□□□□□ -1.12
CLDN4-204ENST00000466411 FAM117AQ9C073 453 aa8.08□□□□□ -1.12
CLDN4-204ENST00000466411 UBE2ZQ9H832 354 aaPredicted RBP8.08□□□□□ -1.12
CLDN4-204ENST00000466411 CERS4Q9HA82 394 aa8.08□□□□□ -1.12
CLDN4-204ENST00000466411 HOXC10Q9NYD6 342 aa8.08□□□□□ -1.12
CLDN4-204ENST00000466411 TNKSO95271 1327 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 MAP1BP46821 2468 aaKnown RBP8.07□□□□□ -1.12
CLDN4-204ENST00000466411 B4E1Z4 1266 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 FGBP02675 491 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 VCAM1P19320 739 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 SSTR3P32745 418 aaPredicted RBP8.07□□□□□ -1.12
CLDN4-204ENST00000466411 KIF5BP33176 963 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 JAG1P78504 1218 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 TAP1Q03518 808 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 GRB10Q13322 594 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 WTAPQ15007 396 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 ANKRD1Q15327 319 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 ASPRV1Q53RT3 343 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 BLOC1S2Q6QNY1 142 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 SPRED2Q7Z698 418 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 CATIPQ7Z7H3 387 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 FAM160B2Q86V87 743 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 TMEM199Q8N511 208 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 NLRP7Q8WX94 980 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 PRRX2Q99811 253 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 TMUB1Q9BVT8 246 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 USP26Q9BXU7 913 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 MAF1Q9H063 256 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 IL25Q9H293 177 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 ZSWIM5Q9P217 1185 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 CLIP2Q9UDT6 1046 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 FEM1BQ9UK73 627 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 RABGAP1Q9Y3P9 1069 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 CYP46A1Q9Y6A2 500 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 ZNF236Q9UL36 1845 aa8.07□□□□□ -1.12
CLDN4-204ENST00000466411 CCDC196A0A1B0GTZ2 297 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 CCDC69A6NI79 296 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 F5H6K3 240 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 IFIT3O14879 490 aaKnown RBP8.06□□□□□ -1.12
CLDN4-204ENST00000466411 COBLO75128 1261 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 ADAMTS4O75173 837 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 DDAH1O94760 285 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 PGK1P00558 417 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 CA3P07451 260 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 BMP3P12645 472 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 GUCY1A2P33402 732 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 SLC1A4P43007 532 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 STAT2P52630 851 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 OAZ1P54368 228 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 ZP2Q05996 745 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 KLRC3Q07444 240 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 COG2Q14746 738 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 HERC4Q5GLZ8 1057 aaPredicted RBP8.06□□□□□ -1.12
CLDN4-204ENST00000466411 DHX32Q7L7V1 743 aaKnown RBP8.06□□□□□ -1.12
CLDN4-204ENST00000466411 OTOP2Q7RTS6 562 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 SKAP1Q86WV1 359 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 TEX2Q8IWB9 1127 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 MB21D2Q8IYB1 491 aaPredicted RBP8.06□□□□□ -1.12
CLDN4-204ENST00000466411 PRPF38AQ8NAV1 312 aaKnown RBP8.06□□□□□ -1.12
CLDN4-204ENST00000466411 PNMA1Q8ND90 353 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 IL17RAQ96F46 866 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 LZTS2Q9BRK4 669 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 TSEN34Q9BSV6 310 aaKnown RBP8.06□□□□□ -1.12
CLDN4-204ENST00000466411 PAGR1Q9BTK6 254 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 TANGO6Q9C0B7 1094 aa8.06□□□□□ -1.12
CLDN4-204ENST00000466411 CTDP1Q9Y5B0 961 aaPredicted RBP8.06□□□□□ -1.12
CLDN4-204ENST00000466411 EP300Q09472 2414 aaPredicted RBP8.05□□□□□ -1.12
CLDN4-204ENST00000466411 COL4A4P53420 1690 aaPredicted RBP8.05□□□□□ -1.12
CLDN4-204ENST00000466411 PRR23AA6NEV1 266 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 PRC1O43663 620 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 CD4P01730 458 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 CYP2C18P33260 490 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 IRS1P35568 1242 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 GNAQP50148 359 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 COL9A2Q14055 689 aaPredicted RBP8.05□□□□□ -1.12
CLDN4-204ENST00000466411 KCTD2Q14681 263 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 C8orf34Q49A92 452 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 TMEM67Q5HYA8 995 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 PTCRAQ6ISU1 281 aaPredicted RBP8.05□□□□□ -1.12
CLDN4-204ENST00000466411 CATSPERGQ6ZRH7 1159 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 SGMS1Q86VZ5 419 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 CCAR1Q8IX12 1150 aaKnown RBP8.05□□□□□ -1.12
CLDN4-204ENST00000466411 STK11IPQ8N1F8 1099 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 ENAHQ8N8S7 591 aaPredicted RBP8.05□□□□□ -1.12
CLDN4-204ENST00000466411 KLHDC9Q8NEP7 349 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 CTCFLQ8NI51 663 aaPredicted RBP8.05□□□□□ -1.12
CLDN4-204ENST00000466411 NEK9Q8TD19 979 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 KCNK17Q96T54 332 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 SLF1Q9BQI6 1058 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.05□□□□□ -1.12
CLDN4-204ENST00000466411 RPAP3Q9H6T3 665 aaPredicted RBP8.05□□□□□ -1.12
CLDN4-204ENST00000466411 GPCPD1Q9NPB8 672 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 XPNPEP3Q9NQH7 507 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 IL17RBQ9NRM6 502 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 LMCD1Q9NZU5 365 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 BTBD7Q9P203 1132 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 ZNF292O60281 2723 aa8.05□□□□□ -1.12
CLDN4-204ENST00000466411 WDR87Q6ZQQ6 2873 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 UMODL1Q5DID0 1318 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 MYH6P13533 1939 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms