RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ADSSL1Q8N142 457 aa20.46■□□□□ 0.87
COL9A3-205ENST00000466192 SPON1Q9HCB6 807 aa20.46■□□□□ 0.87
COL9A3-205ENST00000466192 PARP14Q460N5 1801 aa20.46■□□□□ 0.87
COL9A3-205ENST00000466192 WDR46O15213 610 aaKnown RBP20.46■□□□□ 0.87
COL9A3-205ENST00000466192 NRDCO43847 1150 aa20.46■□□□□ 0.87
COL9A3-205ENST00000466192 TNNT1P13805 278 aa20.46■□□□□ 0.87
COL9A3-205ENST00000466192 CIITAP33076 1130 aa20.46■□□□□ 0.87
COL9A3-205ENST00000466192 ASIC1P78348 528 aa20.46■□□□□ 0.87
COL9A3-205ENST00000466192 NR1I3Q14994 352 aa20.46■□□□□ 0.87
COL9A3-205ENST00000466192 LDHDQ86WU2 507 aa20.46■□□□□ 0.87
COL9A3-205ENST00000466192 GPC2Q8N158 579 aa20.46■□□□□ 0.87
COL9A3-205ENST00000466192 LPAR1Q92633 364 aa20.46■□□□□ 0.87
COL9A3-205ENST00000466192 RAD54LQ92698 747 aa20.46■□□□□ 0.87
COL9A3-205ENST00000466192 A0A1B0GTH6 734 aa20.45■□□□□ 0.86
COL9A3-205ENST00000466192 SPECC1LQ69YQ0 1117 aa20.45■□□□□ 0.86
COL9A3-205ENST00000466192 APOBEC3FQ8IUX4 373 aaKnown RBP20.45■□□□□ 0.86
COL9A3-205ENST00000466192 TEX2Q8IWB9 1127 aa20.45■□□□□ 0.86
COL9A3-205ENST00000466192 SLFN12Q8IYM2 578 aa20.45■□□□□ 0.86
COL9A3-205ENST00000466192 CCAR2Q8N163 923 aaKnown RBP20.45■□□□□ 0.86
COL9A3-205ENST00000466192 MRPL11Q9Y3B7 192 aaKnown RBP20.45■□□□□ 0.86
COL9A3-205ENST00000466192 MYMKA6NI61 221 aa20.45■□□□□ 0.86
COL9A3-205ENST00000466192 GCOM1H8Y6P7 765 aaPredicted RBP20.45■□□□□ 0.86
COL9A3-205ENST00000466192 CYP3A4P08684 503 aa20.45■□□□□ 0.86
COL9A3-205ENST00000466192 POLR2MP0CAP2 368 aa20.45■□□□□ 0.86
COL9A3-205ENST00000466192 DCAF15Q66K64 600 aa20.45■□□□□ 0.86
COL9A3-205ENST00000466192 CYP2W1Q8TAV3 490 aa20.45■□□□□ 0.86
COL9A3-205ENST00000466192 FZD1Q9UP38 647 aa20.45■□□□□ 0.86
COL9A3-205ENST00000466192 PHIPQ8WWQ0 1821 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 ZNF536O15090 1300 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 TBX3O15119 743 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 TEX33O43247 280 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 STAT3P40763 770 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 EPS15P42566 896 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 HIRAP54198 1017 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-205ENST00000466192 PDE4DQ08499 809 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 SPIRE1Q08AE8 756 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 HYIQ5T013 277 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 AGBL1Q96MI9 1066 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 FHDC1Q9C0D6 1143 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-205ENST00000466192 ZNF112Q9UJU3 913 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 ABCB11O95342 1321 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 CCT6AP40227 531 aaKnown RBP20.44■□□□□ 0.86
COL9A3-205ENST00000466192 TBX2Q13207 712 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-205ENST00000466192 MTMR2Q13614 643 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 E4F1Q66K89 784 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-205ENST00000466192 PRPF38AQ8NAV1 312 aaKnown RBP20.44■□□□□ 0.86
COL9A3-205ENST00000466192 MYRIPQ8NFW9 859 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 ZKSCAN4Q969J2 545 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-205ENST00000466192 SLF1Q9BQI6 1058 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 EXOC1Q9NV70 894 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 GGA3Q9NZ52 723 aa20.44■□□□□ 0.86
COL9A3-205ENST00000466192 TRIM49BA6NDI0 452 aa20.43■□□□□ 0.86
COL9A3-205ENST00000466192 ICAM1P05362 532 aa20.43■□□□□ 0.86
COL9A3-205ENST00000466192 EMILIN3Q9NT22 766 aa20.43■□□□□ 0.86
COL9A3-205ENST00000466192 ADD3Q9UEY8 706 aaKnown RBP20.43■□□□□ 0.86
COL9A3-205ENST00000466192 MSH4O15457 936 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 PMS1P54277 932 aaKnown RBP20.42■□□□□ 0.86
COL9A3-205ENST00000466192 STK4Q13043 487 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 SCYL3Q8IZE3 742 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 CCDC47Q96A33 483 aaKnown RBP20.42■□□□□ 0.86
COL9A3-205ENST00000466192 CTAGE1Q96RT6 745 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 WRNIP1Q96S55 665 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 KDM3AQ9Y4C1 1321 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 IGLV3-22A0A075B6J6 115 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 FCER1AP12319 257 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 VCAM1P19320 739 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 ZNF76P36508 570 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 SPP2Q13103 211 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 DYMQ7RTS9 669 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 CREBRFQ8IUR6 639 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 CCDC112Q8NEF3 446 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 FAM20AQ96MK3 541 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 TANGO6Q9C0B7 1094 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 CCPG1Q9ULG6 757 aa20.42■□□□□ 0.86
COL9A3-205ENST00000466192 ADKP55263 362 aaKnown RBP20.41■□□□□ 0.86
COL9A3-205ENST00000466192 PTPN14Q15678 1187 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 HPS3Q969F9 1004 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 NT5C3AQ9H0P0 336 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 TMX1Q9H3N1 280 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 KCND1Q9NSA2 647 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 KIAA1024Q9UPX6 916 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 POTEB3A0JP26 581 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 POTECB2RU33 542 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 UBXN2AP68543 259 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 STIM1Q13586 685 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 POTEBQ6S5H4 581 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 NYAP1Q6ZVC0 841 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 UNC13DQ70J99 1090 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 HOOK2Q96ED9 719 aa20.41■□□□□ 0.86
COL9A3-205ENST00000466192 RLFQ13129 1914 aa20.4■□□□□ 0.86
COL9A3-205ENST00000466192 RBBP6Q7Z6E9 1792 aaKnown RBP20.4■□□□□ 0.86
COL9A3-205ENST00000466192 SSC5DA1L4H1 1573 aa20.4■□□□□ 0.86
COL9A3-205ENST00000466192 E9PMD0 336 aa20.4■□□□□ 0.86
COL9A3-205ENST00000466192 PSMA7O14818 248 aa20.4■□□□□ 0.86
COL9A3-205ENST00000466192 MED24O75448 989 aa20.4■□□□□ 0.86
COL9A3-205ENST00000466192 KRT31Q15323 416 aa20.4■□□□□ 0.86
COL9A3-205ENST00000466192 FILIP1LQ4L180 1135 aa20.4■□□□□ 0.86
COL9A3-205ENST00000466192 CEP135Q66GS9 1140 aa20.4■□□□□ 0.86
COL9A3-205ENST00000466192 CNNM4Q6P4Q7 775 aa20.4■□□□□ 0.86
COL9A3-205ENST00000466192 KIAA0895Q8NCT3 520 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms