RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 WNK4Q96J92 1243 aa6.86□□□□□ -1.31
CHMP3-206ENST00000466032 MPHOSPH6Q99547 160 aaKnown RBP6.86□□□□□ -1.31
CHMP3-206ENST00000466032 TEX13BQ9BXU2 312 aa6.86□□□□□ -1.31
CHMP3-206ENST00000466032 ZNF408Q9H9D4 720 aa6.86□□□□□ -1.31
CHMP3-206ENST00000466032 ELP3Q9H9T3 547 aa6.86□□□□□ -1.31
CHMP3-206ENST00000466032 RTEL1Q9NZ71 1219 aa6.86□□□□□ -1.31
CHMP3-206ENST00000466032 VPS54Q9P1Q0 977 aa6.86□□□□□ -1.31
CHMP3-206ENST00000466032 SCAF8Q9UPN6 1271 aaKnown RBP6.86□□□□□ -1.31
CHMP3-206ENST00000466032 ZDHHC9Q9Y397 364 aa6.86□□□□□ -1.31
CHMP3-206ENST00000466032 MYH6P13533 1939 aa6.86□□□□□ -1.31
CHMP3-206ENST00000466032 TESPA1A2RU30 521 aaPredicted RBP6.85□□□□□ -1.31
CHMP3-206ENST00000466032 TMEM88BA6NKF7 163 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 SPDYE3A6NKU9 549 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 BTBD18B2RXH4 712 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 UBE2Q2LH0YL09 131 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 GCOM1H8Y6P7 765 aaPredicted RBP6.85□□□□□ -1.31
CHMP3-206ENST00000466032 PPP6R2O75170 966 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 ALDH1A1P00352 501 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 POLR2MP0CAP2 368 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 SLURP2P0DP57 97 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 MCM4P33991 863 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 SLC16A2P36021 539 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 USP11P51784 963 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 TERF1P54274 439 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 HUNKP57058 714 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 ZYXQ15942 572 aaKnown RBP6.85□□□□□ -1.31
CHMP3-206ENST00000466032 ARL6IP4Q66PJ3 421 aaKnown RBP6.85□□□□□ -1.31
CHMP3-206ENST00000466032 RGMBQ6NW40 437 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 XRRA1Q6P2D8 792 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 GADL1Q6ZQY3 521 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.85□□□□□ -1.31
CHMP3-206ENST00000466032 SAPCD2Q86UD0 394 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 ZNF526Q8TF50 670 aaPredicted RBP6.85□□□□□ -1.31
CHMP3-206ENST00000466032 SYAP1Q96A49 352 aaPredicted RBP6.85□□□□□ -1.31
CHMP3-206ENST00000466032 CCDC34Q96HJ3 373 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 PYM1Q9BRP8 204 aaKnown RBP6.85□□□□□ -1.31
CHMP3-206ENST00000466032 CCPG1Q9ULG6 757 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 TLL2Q9Y6L7 1015 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 TRPM7Q96QT4 1865 aa6.85□□□□□ -1.31
CHMP3-206ENST00000466032 PFASO15067 1338 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 M0R2N6 131 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 TRAF5O00463 557 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 MAFGO15525 162 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 SLC26A4O43511 780 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 STAM2O75886 525 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 STAT3P40763 770 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 PRPHP41219 470 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 NASPP49321 788 aaPredicted RBP6.84□□□□□ -1.31
CHMP3-206ENST00000466032 CLK2P49760 499 aaKnown RBP6.84□□□□□ -1.31
CHMP3-206ENST00000466032 ZNF157P51786 506 aaPredicted RBP6.84□□□□□ -1.31
CHMP3-206ENST00000466032 UBE2HP62256 183 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 KRT76Q01546 638 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 PKP1Q13835 747 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 SLC39A14Q15043 492 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 SF3A1Q15459 793 aaKnown RBP6.84□□□□□ -1.31
CHMP3-206ENST00000466032 SHROOM1Q2M3G4 852 aaPredicted RBP6.84□□□□□ -1.31
CHMP3-206ENST00000466032 CST9Q5W186 159 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 ANO1Q5XXA6 986 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 NEK8Q86SG6 692 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 RIOX2Q8IUF8 465 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 SHCBP1Q8NEM2 672 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 GPKOWQ92917 476 aaPredicted RBP eCLIP6.84□□□□□ -1.31
CHMP3-206ENST00000466032 FERMT2Q96AC1 680 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 SPATA32Q96LK8 384 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 MAP7D2Q96T17 732 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 PARK7Q99497 189 aaKnown RBP6.84□□□□□ -1.31
CHMP3-206ENST00000466032 NUP88Q99567 741 aaPredicted RBP6.84□□□□□ -1.31
CHMP3-206ENST00000466032 RAB34Q9BZG1 259 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 RCOR1Q9UKL0 485 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 KCNJ14Q9UNX9 436 aa6.84□□□□□ -1.31
CHMP3-206ENST00000466032 PHIPQ8WWQ0 1821 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 LOC285556D6RIA3 1793 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 CCL15-CCL14A0A0B4J2E2 113 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 SPDYE16A6NNV3 312 aaPredicted RBP6.83□□□□□ -1.32
CHMP3-206ENST00000466032 TBX3O15119 743 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 SPTLC2O15270 562 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 STRNO43815 780 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 CYP3A4P08684 503 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 HERVK_113P62684 666 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 PLCB2Q00722 1185 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 GUCY1B3Q02153 619 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 DNM1Q05193 864 aaKnown RBP6.83□□□□□ -1.32
CHMP3-206ENST00000466032 NOGQ13253 232 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 HSP90AA2PQ14568 343 aaPredicted RBP6.83□□□□□ -1.32
CHMP3-206ENST00000466032 STK38Q15208 465 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 CCL15Q16663 113 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 SLC35G1Q2M3R5 365 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 TSR1Q2NL82 804 aaKnown RBP6.83□□□□□ -1.32
CHMP3-206ENST00000466032 KIAA1755Q5JYT7 1200 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 ADALQ6DHV7 355 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 PPP4R3AQ6IN85 833 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 NUDT18Q6ZVK8 323 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 FERMT3Q86UX7 667 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 LINC00301Q8NCQ3 95 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 DNERQ8NFT8 737 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 TNFRSF25Q93038 417 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 COA7Q96BR5 231 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 SCARF2Q96GP6 870 aaPredicted RBP6.83□□□□□ -1.32
CHMP3-206ENST00000466032 CLMNQ96JQ2 1002 aa6.83□□□□□ -1.32
CHMP3-206ENST00000466032 AIFM3Q96NN9 605 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms