RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 ATP2A1O14983 1001 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 SPTLC2O15270 562 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 RAD21O60216 631 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 MBD3O95983 291 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 ICAM1P05362 532 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 PTPREP23469 700 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 HOXA7P31268 230 aaPredicted RBP10.06□□□□□ -0.8
UBA3-208ENST00000465627 ADCY7P51828 1080 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 CEBPZQ03701 1054 aaKnown RBP10.06□□□□□ -0.8
UBA3-208ENST00000465627 PPP1R15BQ5SWA1 713 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 ADALQ6DHV7 355 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 PIK3AP1Q6ZUJ8 805 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 ARMC9Q7Z3E5 817 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 REXO1Q8N1G1 1221 aaKnown RBP10.06□□□□□ -0.8
UBA3-208ENST00000465627 ZNF454Q8N9F8 522 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 ENGASEQ8NFI3 743 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 BICD2Q8TD16 824 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 KCNG4Q8TDN1 519 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 CLEC4DQ8WXI8 215 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 KIFC2Q96AC6 838 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 WNK4Q96J92 1243 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 ANP32EQ9BTT0 268 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 ELP3Q9H9T3 547 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 TMEM260Q9NX78 707 aa10.06□□□□□ -0.8
UBA3-208ENST00000465627 FBXO2Q9UK22 296 aaPredicted RBP10.06□□□□□ -0.8
UBA3-208ENST00000465627 VWA5AO00534 786 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 FDX1P10109 184 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 LIG1P18858 919 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 BMP8BP34820 402 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 ATP2C1P98194 919 aaPredicted RBP10.05□□□□□ -0.8
UBA3-208ENST00000465627 TJAP1Q5JTD0 557 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 TTC38Q5R3I4 469 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 TREML2Q5T2D2 321 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 LBX2Q6XYB7 198 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
UBA3-208ENST00000465627 CUL5Q93034 780 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 ATG4CQ96DT6 458 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 ERO1AQ96HE7 468 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 MBOAT7Q96N66 472 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 PSTPIP2Q9H939 334 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 TMEM63CQ9P1W3 806 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 ZNF214Q9UL59 606 aaPredicted RBP10.05□□□□□ -0.8
UBA3-208ENST00000465627 ARIH1Q9Y4X5 557 aaPredicted RBP10.05□□□□□ -0.8
UBA3-208ENST00000465627 MRVI1Q9Y6F6 885 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 DDX49Q9Y6V7 483 aaKnown RBP10.05□□□□□ -0.8
UBA3-208ENST00000465627 LCTP09848 1927 aa10.05□□□□□ -0.8
UBA3-208ENST00000465627 SPDYE16A6NNV3 312 aaPredicted RBP10.04□□□□□ -0.8
UBA3-208ENST00000465627 USP17L15C9J2P7 530 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 USP17L13C9JLJ4 530 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 USP17L11C9JVI0 530 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 USP17L18D6R9N7 530 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 USP17L22D6RA61 530 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 USP17L17D6RBQ6 530 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 USP17L19D6RCP7 530 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 USP17L20D6RJB6 530 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 FLOT1O75955 427 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 MRPL12P52815 198 aaKnown RBP10.04□□□□□ -0.8
UBA3-208ENST00000465627 OAZ1P54368 228 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 GRIN1Q05586 938 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 USP17L24Q0WX57 530 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 TRAF1Q13077 416 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 IKQ13123 557 aaPredicted RBP10.04□□□□□ -0.8
UBA3-208ENST00000465627 SNW1Q13573 536 aaKnown RBP10.04□□□□□ -0.8
UBA3-208ENST00000465627 GNL2Q13823 731 aaKnown RBP10.04□□□□□ -0.8
UBA3-208ENST00000465627 STK38Q15208 465 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 NONOQ15233 471 aaKnown RBP eCLIP10.04□□□□□ -0.8
UBA3-208ENST00000465627 IL17AQ16552 155 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 UBE2SQ16763 222 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 INF2Q27J81 1249 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 GPAT2Q6NUI2 795 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 USP17L6PQ6QN14 398 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 TBC1D5Q92609 795 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 OPTNQ96CV9 577 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 TANGO6Q9C0B7 1094 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 GOLPH3LQ9H4A5 285 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 BIN2Q9UBW5 565 aaPredicted RBP10.04□□□□□ -0.8
UBA3-208ENST00000465627 HPSEQ9Y251 543 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 SRPRBQ9Y5M8 271 aaKnown RBP10.04□□□□□ -0.8
UBA3-208ENST00000465627 ABCB11O95342 1321 aa10.04□□□□□ -0.8
UBA3-208ENST00000465627 CYP3A7-CYP3A51PA0A087WV96 503 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 CCDC194A0A1B0GVG4 234 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 EVI5O60447 810 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 BMP15O95972 392 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 CMA1P23946 247 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 CYP3A7P24462 503 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 HSD17B4P51659 736 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 AP3B2Q13367 1082 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 ORC2Q13416 577 aaPredicted RBP10.03□□□□□ -0.8
UBA3-208ENST00000465627 COG2Q14746 738 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 MTFR1Q15390 333 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 USH1GQ495M9 461 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 JAKMIP3Q5VZ66 844 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 RESP18Q5W5W9 173 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 MCTP2Q6DN12 878 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 SHC4Q6S5L8 630 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 TBCKQ8TEA7 893 aa10.03□□□□□ -0.8
UBA3-208ENST00000465627 CDX2Q99626 313 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms