RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 EEPD1Q7L9B9 569 aa20.1■□□□□ 0.81
CPSF4-209ENST00000465132 FBXO16Q8IX29 292 aaPredicted RBP20.1■□□□□ 0.81
CPSF4-209ENST00000465132 ADGRF4Q8IZF3 695 aa20.1■□□□□ 0.81
CPSF4-209ENST00000465132 TIFAQ96CG3 184 aa20.1■□□□□ 0.81
CPSF4-209ENST00000465132 LLPHQ9BRT6 129 aaKnown RBP20.1■□□□□ 0.81
CPSF4-209ENST00000465132 RANBP17Q9H2T7 1088 aaKnown RBP20.1■□□□□ 0.81
CPSF4-209ENST00000465132 ZNF576Q9H609 170 aa20.1■□□□□ 0.81
CPSF4-209ENST00000465132 RIOX1Q9H6W3 641 aa20.1■□□□□ 0.81
CPSF4-209ENST00000465132 Q9Y3F1 56 aa20.1■□□□□ 0.81
CPSF4-209ENST00000465132 KIF3AQ9Y496 699 aa20.1■□□□□ 0.81
CPSF4-209ENST00000465132 MYH6P13533 1939 aa20.1■□□□□ 0.81
CPSF4-209ENST00000465132 hCG_1984214I3L0E3 225 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 ACRP10323 421 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 IFNAR1P17181 557 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 RXRAP19793 462 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 CYP2C18P33260 490 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 CCT2P78371 535 aaKnown RBP20.09■□□□□ 0.81
CPSF4-209ENST00000465132 STK3Q13188 491 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 PSRC1Q6PGN9 363 aaPredicted RBP20.09■□□□□ 0.81
CPSF4-209ENST00000465132 STAG2Q8N3U4 1231 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 ZNF713Q8N859 430 aaPredicted RBP20.09■□□□□ 0.81
CPSF4-209ENST00000465132 MORC4Q8TE76 937 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 WASF1Q92558 559 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 GTF3C6Q969F1 213 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 PURBQ96QR8 312 aaKnown RBP20.09■□□□□ 0.81
CPSF4-209ENST00000465132 UBA5Q9GZZ9 404 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 MAF1Q9H063 256 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 VTA1Q9NP79 307 aa20.09■□□□□ 0.81
CPSF4-209ENST00000465132 CDH23Q9H251 3354 aa20.08■□□□□ 0.81
CPSF4-209ENST00000465132 GRIN2DO15399 1336 aa20.08■□□□□ 0.81
CPSF4-209ENST00000465132 LRRC37A2A6NM11 1700 aa20.08■□□□□ 0.81
CPSF4-209ENST00000465132 PNMA6FA0A0J9YX94 578 aa20.08■□□□□ 0.81
CPSF4-209ENST00000465132 ZBTB5O15062 677 aa20.08■□□□□ 0.81
CPSF4-209ENST00000465132 ZEB2O60315 1214 aa20.08■□□□□ 0.81
CPSF4-209ENST00000465132 SLC16A2P36021 539 aa20.08■□□□□ 0.81
CPSF4-209ENST00000465132 SSRP1Q08945 709 aaKnown RBP20.08■□□□□ 0.81
CPSF4-209ENST00000465132 ITGA7Q13683 1181 aa20.08■□□□□ 0.81
CPSF4-209ENST00000465132 TMEM63BQ5T3F8 832 aa20.08■□□□□ 0.81
CPSF4-209ENST00000465132 RNF26Q9BY78 433 aaPredicted RBP20.08■□□□□ 0.81
CPSF4-209ENST00000465132 SEZ6LQ9BYH1 1024 aa20.08■□□□□ 0.81
CPSF4-209ENST00000465132 VAT1LQ9HCJ6 419 aa20.08■□□□□ 0.81
CPSF4-209ENST00000465132 GRXCR1A8MXD5 290 aa20.07■□□□□ 0.8
CPSF4-209ENST00000465132 ADD1P35611 737 aaKnown RBP20.07■□□□□ 0.8
CPSF4-209ENST00000465132 PBX2P40425 430 aa20.07■□□□□ 0.8
CPSF4-209ENST00000465132 BAATQ14032 418 aaPredicted RBP20.07■□□□□ 0.8
CPSF4-209ENST00000465132 ME3Q16798 604 aa20.07■□□□□ 0.8
CPSF4-209ENST00000465132 TEX2Q8IWB9 1127 aa20.07■□□□□ 0.8
CPSF4-209ENST00000465132 FAM177A1Q8N128 213 aaPredicted RBP20.07■□□□□ 0.8
CPSF4-209ENST00000465132 AMNQ9BXJ7 453 aa20.07■□□□□ 0.8
CPSF4-209ENST00000465132 PBX4Q9BYU1 374 aa20.07■□□□□ 0.8
CPSF4-209ENST00000465132 HIPK3Q9H422 1215 aa20.07■□□□□ 0.8
CPSF4-209ENST00000465132 IL23AQ9NPF7 189 aa20.07■□□□□ 0.8
CPSF4-209ENST00000465132 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.07■□□□□ 0.8
CPSF4-209ENST00000465132 XBP1P17861 261 aa20.06■□□□□ 0.8
CPSF4-209ENST00000465132 CDC37Q16543 378 aaPredicted RBP20.06■□□□□ 0.8
CPSF4-209ENST00000465132 FBXO11Q86XK2 927 aa20.06■□□□□ 0.8
CPSF4-209ENST00000465132 RAB11FIP4Q86YS3 637 aa20.06■□□□□ 0.8
CPSF4-209ENST00000465132 SRBD1Q8N5C6 995 aaKnown RBP20.06■□□□□ 0.8
CPSF4-209ENST00000465132 CCDC12Q8WUD4 166 aaPredicted RBP20.06■□□□□ 0.8
CPSF4-209ENST00000465132 HERVK_113Q902F9 699 aa20.06■□□□□ 0.8
CPSF4-209ENST00000465132 JMJD4Q9H9V9 463 aa20.06■□□□□ 0.8
CPSF4-209ENST00000465132 ADD3Q9UEY8 706 aaKnown RBP20.06■□□□□ 0.8
CPSF4-209ENST00000465132 UMODL1Q5DID0 1318 aa20.05■□□□□ 0.8
CPSF4-209ENST00000465132 K7ELQ4 463 aaPredicted RBP20.05■□□□□ 0.8
CPSF4-209ENST00000465132 NFIBO00712 420 aa20.05■□□□□ 0.8
CPSF4-209ENST00000465132 PRPF3O43395 683 aaKnown RBP20.05■□□□□ 0.8
CPSF4-209ENST00000465132 PLEKHA8P1O95397 391 aa20.05■□□□□ 0.8
CPSF4-209ENST00000465132 CDC27P30260 824 aa20.05■□□□□ 0.8
CPSF4-209ENST00000465132 ALDH5A1P51649 535 aaPredicted RBP20.05■□□□□ 0.8
CPSF4-209ENST00000465132 PSMC6P62333 389 aa20.05■□□□□ 0.8
CPSF4-209ENST00000465132 HMGN5P82970 282 aaKnown RBP20.05■□□□□ 0.8
CPSF4-209ENST00000465132 SCRN1Q12765 414 aa20.05■□□□□ 0.8
CPSF4-209ENST00000465132 DUSP28Q4G0W2 176 aa20.05■□□□□ 0.8
CPSF4-209ENST00000465132 TMX3Q96JJ7 454 aa20.05■□□□□ 0.8
CPSF4-209ENST00000465132 LARP6Q9BRS8 491 aaKnown RBP20.05■□□□□ 0.8
CPSF4-209ENST00000465132 NOC4LQ9BVI4 516 aaKnown RBP20.05■□□□□ 0.8
CPSF4-209ENST00000465132 GLT8D2Q9H1C3 349 aa20.05■□□□□ 0.8
CPSF4-209ENST00000465132 TRPV6Q9H1D0 765 aa20.05■□□□□ 0.8
CPSF4-209ENST00000465132 EYSQ5T1H1 3165 aa20.05■□□□□ 0.8
CPSF4-209ENST00000465132 ABCB11O95342 1321 aa20.04■□□□□ 0.8
CPSF4-209ENST00000465132 STK36Q9NRP7 1315 aa20.04■□□□□ 0.8
CPSF4-209ENST00000465132 LOC102724159A0A0B4J2E5 919 aa20.04■□□□□ 0.8
CPSF4-209ENST00000465132 B4GALT4O60513 344 aa20.04■□□□□ 0.8
CPSF4-209ENST00000465132 DEXIO95424 95 aa20.04■□□□□ 0.8
CPSF4-209ENST00000465132 HSP90AA1P07900 732 aaKnown RBP20.04■□□□□ 0.8
CPSF4-209ENST00000465132 PWP2Q15269 919 aaKnown RBP20.04■□□□□ 0.8
CPSF4-209ENST00000465132 HOMER1Q86YM7 354 aa20.04■□□□□ 0.8
CPSF4-209ENST00000465132 CCDC82Q8N4S0 544 aa20.04■□□□□ 0.8
CPSF4-209ENST00000465132 SAMD3Q8N6K7 520 aa20.04■□□□□ 0.8
CPSF4-209ENST00000465132 MTMR8Q96EF0 704 aa20.04■□□□□ 0.8
CPSF4-209ENST00000465132 NCOA5Q9HCD5 579 aaKnown RBP20.04■□□□□ 0.8
CPSF4-209ENST00000465132 FAM217BQ9NTX9 383 aaPredicted RBP20.04■□□□□ 0.8
CPSF4-209ENST00000465132 CXXC1Q9P0U4 656 aaPredicted RBP20.04■□□□□ 0.8
CPSF4-209ENST00000465132 MRPL11Q9Y3B7 192 aaKnown RBP20.04■□□□□ 0.8
CPSF4-209ENST00000465132 V9GY48 417 aaPredicted RBP20.04■□□□□ 0.8
CPSF4-209ENST00000465132 LCTP09848 1927 aa20.04■□□□□ 0.8
CPSF4-209ENST00000465132 PTPDC1A2A3K4 754 aa20.03■□□□□ 0.8
CPSF4-209ENST00000465132 FGBP02675 491 aa20.03■□□□□ 0.8
CPSF4-209ENST00000465132 ANP32AP39687 249 aaKnown RBP20.03■□□□□ 0.8
CPSF4-209ENST00000465132 QRICH1Q2TAL8 776 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms