RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 BRWD1Q9NSI6 2320 aa17.12■□□□□ 0.33
MCF2L-220ENST00000464800 CXCL10P02778 98 aa17.11■□□□□ 0.33
MCF2L-220ENST00000464800 GOLGA8HP0CJ92 632 aa17.11■□□□□ 0.33
MCF2L-220ENST00000464800 HOXD11P31277 338 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-220ENST00000464800 GPNMBQ14956 572 aa17.11■□□□□ 0.33
MCF2L-220ENST00000464800 CDC37Q16543 378 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-220ENST00000464800 DGKDQ16760 1214 aa17.11■□□□□ 0.33
MCF2L-220ENST00000464800 C7orf31Q8N865 590 aa17.11■□□□□ 0.33
MCF2L-220ENST00000464800 NSUN6Q8TEA1 469 aaKnown RBP17.11■□□□□ 0.33
MCF2L-220ENST00000464800 KATNAL1Q9BW62 490 aa17.11■□□□□ 0.33
MCF2L-220ENST00000464800 GTF2IRD1Q9UHL9 959 aa17.11■□□□□ 0.33
MCF2L-220ENST00000464800 MTUS1Q9ULD2 1270 aa17.11■□□□□ 0.33
MCF2L-220ENST00000464800 ABCB11O95342 1321 aa17.11■□□□□ 0.33
MCF2L-220ENST00000464800 MICAL3Q7RTP6 2002 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 ABHD14A-ACY1A0A1B0GW23 586 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 NBNO60934 754 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 EFCAB14O75071 495 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 GJB5O95377 273 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 CKBP12277 381 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 STXBP2Q15833 593 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-220ENST00000464800 TBC1D10CQ8IV04 446 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 ESR2Q92731 530 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 TAAR1Q96RJ0 339 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 TGS1Q96RS0 853 aaKnown RBP17.1■□□□□ 0.33
MCF2L-220ENST00000464800 IWS1Q96ST2 819 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 RAD9AQ99638 391 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 CPVLQ9H3G5 476 aa17.1■□□□□ 0.33
MCF2L-220ENST00000464800 RNF41Q9H4P4 317 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-220ENST00000464800 PDE1AP54750 535 aa17.09■□□□□ 0.33
MCF2L-220ENST00000464800 ANKRD45Q5TZF3 282 aa17.09■□□□□ 0.33
MCF2L-220ENST00000464800 TICAM2Q86XR7 235 aa17.09■□□□□ 0.33
MCF2L-220ENST00000464800 MCF2L2Q86YR7 1114 aa17.09■□□□□ 0.33
MCF2L-220ENST00000464800 SYTL5Q8TDW5 730 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-220ENST00000464800 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
MCF2L-220ENST00000464800 RMDN3Q96TC7 470 aa17.09■□□□□ 0.33
MCF2L-220ENST00000464800 UBA5Q9GZZ9 404 aa17.09■□□□□ 0.33
MCF2L-220ENST00000464800 SUGCTQ9HAC7 445 aa17.09■□□□□ 0.33
MCF2L-220ENST00000464800 COL20A1Q9P218 1284 aa17.09■□□□□ 0.33
MCF2L-220ENST00000464800 HDAC6Q9UBN7 1215 aa17.09■□□□□ 0.33
MCF2L-220ENST00000464800 NEDD4P46934 1319 aa17.09■□□□□ 0.33
MCF2L-220ENST00000464800 CCDC171Q6TFL3 1326 aa17.09■□□□□ 0.33
MCF2L-220ENST00000464800 LINC01553A4QN01 128 aa17.08■□□□□ 0.32
MCF2L-220ENST00000464800 ZNF286BP0CG31 522 aa17.08■□□□□ 0.32
MCF2L-220ENST00000464800 PSEN2P49810 448 aa17.08■□□□□ 0.32
MCF2L-220ENST00000464800 ERVK-21P61565 698 aa17.08■□□□□ 0.32
MCF2L-220ENST00000464800 NMIQ13287 307 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-220ENST00000464800 PTK7Q13308 1070 aa17.08■□□□□ 0.32
MCF2L-220ENST00000464800 IKBKEQ14164 716 aa17.08■□□□□ 0.32
MCF2L-220ENST00000464800 MFSD10Q14728 455 aa17.08■□□□□ 0.32
MCF2L-220ENST00000464800 DGKHQ86XP1 1220 aa17.08■□□□□ 0.32
MCF2L-220ENST00000464800 PNMA1Q8ND90 353 aa17.08■□□□□ 0.32
MCF2L-220ENST00000464800 TBC1D5Q92609 795 aa17.08■□□□□ 0.32
MCF2L-220ENST00000464800 KHSRPQ92945 711 aaKnown RBP eCLIP17.08■□□□□ 0.32
MCF2L-220ENST00000464800 EMID1Q96A84 441 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-220ENST00000464800 ZKSCAN3Q9BRR0 538 aa17.08■□□□□ 0.32
MCF2L-220ENST00000464800 ALG1Q9BT22 464 aa17.08■□□□□ 0.32
MCF2L-220ENST00000464800 UBE2ZQ9H832 354 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-220ENST00000464800 FAM86C2PA6NEL3 165 aa17.07■□□□□ 0.32
MCF2L-220ENST00000464800 GPR37L1O60883 481 aa17.07■□□□□ 0.32
MCF2L-220ENST00000464800 F2P00734 622 aa17.07■□□□□ 0.32
MCF2L-220ENST00000464800 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
MCF2L-220ENST00000464800 TCTN1Q2MV58 587 aa17.07■□□□□ 0.32
MCF2L-220ENST00000464800 ASPRV1Q53RT3 343 aa17.07■□□□□ 0.32
MCF2L-220ENST00000464800 ARHGEF16Q5VV41 709 aa17.07■□□□□ 0.32
MCF2L-220ENST00000464800 ADGRF4Q8IZF3 695 aa17.07■□□□□ 0.32
MCF2L-220ENST00000464800 PPTC7Q8NI37 304 aa17.07■□□□□ 0.32
MCF2L-220ENST00000464800 KAT14Q9H8E8 782 aa17.07■□□□□ 0.32
MCF2L-220ENST00000464800 C11orf16Q9NQ32 467 aa17.07■□□□□ 0.32
MCF2L-220ENST00000464800 DDX41Q9UJV9 622 aaKnown RBP17.07■□□□□ 0.32
MCF2L-220ENST00000464800 MRPL11Q9Y3B7 192 aaKnown RBP17.07■□□□□ 0.32
MCF2L-220ENST00000464800 MRVI1Q9Y6F6 885 aa17.07■□□□□ 0.32
MCF2L-220ENST00000464800 DHX16O60231 1041 aaKnown RBP17.06■□□□□ 0.32
MCF2L-220ENST00000464800 EIF2AK2P19525 551 aaKnown RBP17.06■□□□□ 0.32
MCF2L-220ENST00000464800 MFAP1P55081 439 aaKnown RBP17.06■□□□□ 0.32
MCF2L-220ENST00000464800 LAMC2Q13753 1193 aa17.06■□□□□ 0.32
MCF2L-220ENST00000464800 QRICH1Q2TAL8 776 aa17.06■□□□□ 0.32
MCF2L-220ENST00000464800 CCDC178Q5BJE1 867 aa17.06■□□□□ 0.32
MCF2L-220ENST00000464800 ZNF618Q5T7W0 954 aa17.06■□□□□ 0.32
MCF2L-220ENST00000464800 FAM117BQ6P1L5 589 aa17.06■□□□□ 0.32
MCF2L-220ENST00000464800 IQCA1Q86XH1 822 aa17.06■□□□□ 0.32
MCF2L-220ENST00000464800 FBXO11Q86XK2 927 aa17.06■□□□□ 0.32
MCF2L-220ENST00000464800 NLRC5Q86WI3 1866 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 EMSYQ7Z589 1322 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 PI4K2BG5E9Z4 385 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 HAS3O00219 553 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 LGR5O75473 907 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 EIF3JO75822 258 aaKnown RBP17.05■□□□□ 0.32
MCF2L-220ENST00000464800 NT5C2P49902 561 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 TRIM71Q2Q1W2 868 aaKnown RBP17.05■□□□□ 0.32
MCF2L-220ENST00000464800 LEXMQ3ZCV2 418 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 TRAF7Q6Q0C0 670 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 DHX37Q8IY37 1157 aaKnown RBP17.05■□□□□ 0.32
MCF2L-220ENST00000464800 FBXO22Q8NEZ5 403 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 WNT8BQ93098 351 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 CD320Q9NPF0 282 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 PXMP2Q9NR77 195 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 INSL6Q9Y581 213 aa17.05■□□□□ 0.32
MCF2L-220ENST00000464800 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-220ENST00000464800 TRIM6-TRIM34B2RNG4 842 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms