RNA–Protein interactions for RNA: ENST00000464673.1

LINC01998-201, Transcript of long intergenic non-protein coding RNA 1998, humanhuman

TSL 1 (best) BASIC

Gene LINC01998, Length 1,967 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01998-201ENST00000464673 USP17L11C9JVI0 530 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 USP17L18D6R9N7 530 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 USP17L22D6RA61 530 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 USP17L17D6RBQ6 530 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 USP17L19D6RCP7 530 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 USP17L20D6RJB6 530 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 HOXA7P31268 230 aaPredicted RBP11.07□□□□□ -0.64
LINC01998-201ENST00000464673 GABPB1Q06547 395 aaPredicted RBP11.07□□□□□ -0.64
LINC01998-201ENST00000464673 USP17L24Q0WX57 530 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 DPYDQ12882 1025 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 COG2Q14746 738 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 SPECC1Q5M775 1068 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 SYDE2Q5VT97 1194 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 CDKAL1Q5VV42 579 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 SPATA1Q5VX52 437 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 GPAT2Q6NUI2 795 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 HOMER1Q86YM7 354 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 SLF1Q9BQI6 1058 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 DNAI1Q9UI46 699 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 LOC285556D6RIA3 1793 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 VWA3AA6NCI4 1184 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 FECHP22830 423 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 PBX1P40424 430 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 HTRA3P83110 453 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 ELF2Q15723 593 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 USP49Q70CQ1 688 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 FAM160B2Q86V87 743 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 FAM177A1Q8N128 213 aaPredicted RBP11.07□□□□□ -0.64
LINC01998-201ENST00000464673 PAGE5Q96GU1 130 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 PANX2Q96RD6 677 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 PIGSQ96S52 555 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 BAG1Q99933 345 aaPredicted RBP11.07□□□□□ -0.64
LINC01998-201ENST00000464673 PTPN18Q99952 460 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 VPS54Q9P1Q0 977 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 PPP2R2CQ9Y2T4 447 aa11.07□□□□□ -0.64
LINC01998-201ENST00000464673 A0A087X0B3 334 aa11.06□□□□□ -0.64
LINC01998-201ENST00000464673 MANSC4A6NHS7 340 aaPredicted RBP11.06□□□□□ -0.64
LINC01998-201ENST00000464673 BTBD19C9JJ37 291 aa11.06□□□□□ -0.64
LINC01998-201ENST00000464673 EARS2Q5JPH6 523 aaKnown RBP11.06□□□□□ -0.64
LINC01998-201ENST00000464673 TTC38Q5R3I4 469 aa11.06□□□□□ -0.64
LINC01998-201ENST00000464673 FBXO38Q6PIJ6 1188 aa11.06□□□□□ -0.64
LINC01998-201ENST00000464673 RRP36Q96EU6 259 aaKnown RBP11.06□□□□□ -0.64
LINC01998-201ENST00000464673 ZIC5Q96T25 663 aa11.06□□□□□ -0.64
LINC01998-201ENST00000464673 ARID3AQ99856 593 aa11.06□□□□□ -0.64
LINC01998-201ENST00000464673 NAA15Q9BXJ9 866 aaKnown RBP11.06□□□□□ -0.64
LINC01998-201ENST00000464673 HOXC10Q9NYD6 342 aa11.06□□□□□ -0.64
LINC01998-201ENST00000464673 PPP1R9AQ9ULJ8 1098 aa11.06□□□□□ -0.64
LINC01998-201ENST00000464673 RLFQ13129 1914 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
LINC01998-201ENST00000464673 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 INHBEP58166 350 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 SNAP25P60880 206 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 FAM193AP78312 1265 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 SEMA3FQ13275 785 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 PABPC4Q13310 644 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC01998-201ENST00000464673 E2F4Q16254 413 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 SYMPKQ92797 1274 aaKnown RBP11.05□□□□□ -0.64
LINC01998-201ENST00000464673 MTMR8Q96EF0 704 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 CAPNS2Q96L46 248 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 CTAGE1Q96RT6 745 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 P2RX7Q99572 595 aaKnown RBP11.05□□□□□ -0.64
LINC01998-201ENST00000464673 ASCC2Q9H1I8 757 aaPredicted RBP11.05□□□□□ -0.64
LINC01998-201ENST00000464673 SH3GLB2Q9NR46 395 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 SEC63Q9UGP8 760 aaKnown RBP11.05□□□□□ -0.64
LINC01998-201ENST00000464673 ITIH6Q6UXX5 1313 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 SYNRGQ9UMZ2 1314 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 PNMA6FA0A0J9YX94 578 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 PDHXO00330 501 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 VWA5AO00534 786 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 ZBTB5O15062 677 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 FANCGO15287 622 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 DSG3P32926 999 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 IRX3P78415 501 aaPredicted RBP11.05□□□□□ -0.64
LINC01998-201ENST00000464673 NOGQ13253 232 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 CDC37Q16543 378 aaPredicted RBP11.05□□□□□ -0.64
LINC01998-201ENST00000464673 PFKFB3Q16875 520 aaPredicted RBP11.05□□□□□ -0.64
LINC01998-201ENST00000464673 ARL6IP4Q66PJ3 421 aaKnown RBP11.05□□□□□ -0.64
LINC01998-201ENST00000464673 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 GRAMD1CQ8IYS0 662 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 DHX58Q96C10 678 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 ATG4CQ96DT6 458 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 ADD3Q9UEY8 706 aaKnown RBP11.05□□□□□ -0.64
LINC01998-201ENST00000464673 ADAMTS5Q9UNA0 930 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 PARP14Q460N5 1801 aa11.05□□□□□ -0.64
LINC01998-201ENST00000464673 SPDYE4A6NLX3 237 aa11.04□□□□□ -0.64
LINC01998-201ENST00000464673 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
LINC01998-201ENST00000464673 PPP1R3GB7ZBB8 358 aa11.04□□□□□ -0.64
LINC01998-201ENST00000464673 TADA3O75528 432 aa11.04□□□□□ -0.64
LINC01998-201ENST00000464673 TPM1P09493 284 aa11.04□□□□□ -0.64
LINC01998-201ENST00000464673 CYP2C8P10632 490 aa11.04□□□□□ -0.64
LINC01998-201ENST00000464673 SCG2P13521 617 aa11.04□□□□□ -0.64
LINC01998-201ENST00000464673 CDK11BP21127 795 aaKnown RBP11.04□□□□□ -0.64
LINC01998-201ENST00000464673 QRICH1Q2TAL8 776 aa11.04□□□□□ -0.64
LINC01998-201ENST00000464673 KRT222Q8N1A0 295 aa11.04□□□□□ -0.64
LINC01998-201ENST00000464673 PDILTQ8N807 584 aa11.04□□□□□ -0.64
LINC01998-201ENST00000464673 CCDC51Q96ER9 411 aa11.04□□□□□ -0.64
LINC01998-201ENST00000464673 EPSTI1Q96J88 318 aa11.04□□□□□ -0.64
LINC01998-201ENST00000464673 RANBP17Q9H2T7 1088 aaKnown RBP11.04□□□□□ -0.64
LINC01998-201ENST00000464673 SLC38A10Q9HBR0 1119 aa11.04□□□□□ -0.64
LINC01998-201ENST00000464673 SAMSN1Q9NSI8 373 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms