RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ANO10Q9NW15 660 aa21.43■■□□□ 1.02
CCDC78-206ENST00000463539 IGLV3-22A0A075B6J6 115 aa21.43■■□□□ 1.02
CCDC78-206ENST00000463539 HERVK_113P62684 666 aa21.43■■□□□ 1.02
CCDC78-206ENST00000463539 CEP55Q53EZ4 464 aa21.43■■□□□ 1.02
CCDC78-206ENST00000463539 RRAGBQ5VZM2 374 aa21.43■■□□□ 1.02
CCDC78-206ENST00000463539 GRAMD1CQ8IYS0 662 aa21.43■■□□□ 1.02
CCDC78-206ENST00000463539 PAGE5Q96GU1 130 aa21.43■■□□□ 1.02
CCDC78-206ENST00000463539 FAM20AQ96MK3 541 aa21.43■■□□□ 1.02
CCDC78-206ENST00000463539 TUBE1Q9UJT0 475 aa21.43■■□□□ 1.02
CCDC78-206ENST00000463539 CAVIN2O95810 425 aa21.42■■□□□ 1.02
CCDC78-206ENST00000463539 OSBPP22059 807 aa21.42■■□□□ 1.02
CCDC78-206ENST00000463539 BAATQ14032 418 aaPredicted RBP21.42■■□□□ 1.02
CCDC78-206ENST00000463539 GPAT2Q6NUI2 795 aa21.42■■□□□ 1.02
CCDC78-206ENST00000463539 PDXDC2PQ6P474 469 aa21.42■■□□□ 1.02
CCDC78-206ENST00000463539 POTEEQ6S8J3 1075 aa21.42■■□□□ 1.02
CCDC78-206ENST00000463539 DNAJC25Q9H1X3 360 aa21.42■■□□□ 1.02
CCDC78-206ENST00000463539 BTBD7Q9P203 1132 aa21.42■■□□□ 1.02
CCDC78-206ENST00000463539 FRMPD4Q14CM0 1322 aa21.42■■□□□ 1.02
CCDC78-206ENST00000463539 MSH4O15457 936 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 ITGBL1O95965 494 aaPredicted RBP21.41■■□□□ 1.02
CCDC78-206ENST00000463539 PRR29P0C7W0 189 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 KRT79Q5XKE5 535 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 SH3RF1Q7Z6J0 888 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 CHST13Q8NET6 341 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 FAM200AQ8TCP9 573 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 CALML4Q96GE6 196 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 UIMC1Q96RL1 719 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 MMTAG2Q9BU76 263 aaKnown RBP21.41■■□□□ 1.02
CCDC78-206ENST00000463539 MAF1Q9H063 256 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 PCDHA5Q9Y5H7 936 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 BIN1O00499 593 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 CETPP11597 493 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 AFMP43652 599 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 GTF2A2P52657 109 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 SETQ01105 290 aaPredicted RBP21.41■■□□□ 1.02
CCDC78-206ENST00000463539 PLA2G4DQ86XP0 818 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 TAAR1Q96RJ0 339 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 RMDN3Q96TC7 470 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 PAGR1Q9BTK6 254 aa21.41■■□□□ 1.02
CCDC78-206ENST00000463539 A0A0G2JMZ2 1700 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 A0A087WWV3 80 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 SMC2O95347 1197 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 PLCG1P19174 1290 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 EIF2AK2P19525 551 aaKnown RBP21.4■■□□□ 1.02
CCDC78-206ENST00000463539 NAALADL2Q58DX5 795 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 CST9Q5W186 159 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 PCNX4Q63HM2 1172 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 RIOX2Q8IUF8 465 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 SNX29Q8TEQ0 813 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 SMARCE1Q969G3 411 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 PLIN2Q99541 437 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 SPATC1LQ9H0A9 340 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 CUEDC2Q9H467 287 aa21.4■■□□□ 1.02
CCDC78-206ENST00000463539 A1CFQ9NQ94 594 aaKnown RBP21.4■■□□□ 1.02
CCDC78-206ENST00000463539 RBBP6Q7Z6E9 1792 aaKnown RBP21.4■■□□□ 1.02
CCDC78-206ENST00000463539 COL11A1P12107 1806 aaPredicted RBP21.39■■□□□ 1.02
CCDC78-206ENST00000463539 MKRN3Q13064 507 aaKnown RBP21.39■■□□□ 1.02
CCDC78-206ENST00000463539 ARHGEF16Q5VV41 709 aa21.39■■□□□ 1.02
CCDC78-206ENST00000463539 IL31RAQ8NI17 732 aa21.39■■□□□ 1.02
CCDC78-206ENST00000463539 CDK5RAP3Q96JB5 506 aa21.39■■□□□ 1.02
CCDC78-206ENST00000463539 PXMP2Q9NR77 195 aa21.39■■□□□ 1.02
CCDC78-206ENST00000463539 CYP39A1Q9NYL5 469 aa21.39■■□□□ 1.02
CCDC78-206ENST00000463539 FBXO40Q9UH90 709 aa21.39■■□□□ 1.02
CCDC78-206ENST00000463539 PNMA3Q9UL41 463 aa21.39■■□□□ 1.02
CCDC78-206ENST00000463539 MEIS1O00470 390 aa21.39■■□□□ 1.01
CCDC78-206ENST00000463539 PEX10O60683 326 aa21.39■■□□□ 1.01
CCDC78-206ENST00000463539 ZNF165P49910 485 aa21.39■■□□□ 1.01
CCDC78-206ENST00000463539 NLRP12P59046 1061 aa21.39■■□□□ 1.01
CCDC78-206ENST00000463539 MXRA8Q9BRK3 442 aa21.39■■□□□ 1.01
CCDC78-206ENST00000463539 MAGEF1Q9HAY2 307 aa21.39■■□□□ 1.01
CCDC78-206ENST00000463539 CCL15-CCL14A0A0B4J2E2 113 aa21.38■■□□□ 1.01
CCDC78-206ENST00000463539 ZBTB48P10074 688 aaPredicted RBP21.38■■□□□ 1.01
CCDC78-206ENST00000463539 PGM5Q15124 567 aa21.38■■□□□ 1.01
CCDC78-206ENST00000463539 CCL15Q16663 113 aa21.38■■□□□ 1.01
CCDC78-206ENST00000463539 DPCR1Q3MIW9 517 aa21.38■■□□□ 1.01
CCDC78-206ENST00000463539 NT5DC1Q5TFE4 455 aa21.38■■□□□ 1.01
CCDC78-206ENST00000463539 C11orf57Q6ZUT1 292 aaPredicted RBP21.38■■□□□ 1.01
CCDC78-206ENST00000463539 ZFP91Q96JP5 570 aaPredicted RBP21.38■■□□□ 1.01
CCDC78-206ENST00000463539 MS4A4AQ96JQ5 239 aa21.38■■□□□ 1.01
CCDC78-206ENST00000463539 PDCD2LQ9BRP1 358 aa21.38■■□□□ 1.01
CCDC78-206ENST00000463539 NAT10Q9H0A0 1025 aaKnown RBP21.38■■□□□ 1.01
CCDC78-206ENST00000463539 CNMDO75829 334 aa21.37■■□□□ 1.01
CCDC78-206ENST00000463539 ITGB5P18084 799 aa21.37■■□□□ 1.01
CCDC78-206ENST00000463539 SPIRE1Q08AE8 756 aa21.37■■□□□ 1.01
CCDC78-206ENST00000463539 SPRYD7Q5W111 196 aa21.37■■□□□ 1.01
CCDC78-206ENST00000463539 SPATA20Q8TB22 786 aa21.37■■□□□ 1.01
CCDC78-206ENST00000463539 STAMQ92783 540 aa21.37■■□□□ 1.01
CCDC78-206ENST00000463539 PURBQ96QR8 312 aaKnown RBP21.37■■□□□ 1.01
CCDC78-206ENST00000463539 CBX8Q9HC52 389 aa21.37■■□□□ 1.01
CCDC78-206ENST00000463539 HUNKP57058 714 aa21.36■■□□□ 1.01
CCDC78-206ENST00000463539 DPYDQ12882 1025 aa21.36■■□□□ 1.01
CCDC78-206ENST00000463539 GRB10Q13322 594 aa21.36■■□□□ 1.01
CCDC78-206ENST00000463539 NIPA1Q7RTP0 329 aa21.36■■□□□ 1.01
CCDC78-206ENST00000463539 NCAPG2Q86XI2 1143 aa21.36■■□□□ 1.01
CCDC78-206ENST00000463539 ANKRD35Q8N283 1001 aa21.36■■□□□ 1.01
CCDC78-206ENST00000463539 ERMNQ8TAM6 284 aa21.36■■□□□ 1.01
CCDC78-206ENST00000463539 NSUN6Q8TEA1 469 aaKnown RBP21.36■■□□□ 1.01
CCDC78-206ENST00000463539 SLC5A5Q92911 643 aa21.36■■□□□ 1.01
CCDC78-206ENST00000463539 MTRQ99707 1265 aa21.36■■□□□ 1.01
CCDC78-206ENST00000463539 ZNF577Q9BSK1 485 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms