RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 DYNC1LI2O43237 492 aaPredicted RBP11.67□□□□□ -0.54
SYN3-206ENST00000461446 DTNBO60941 627 aa11.67□□□□□ -0.54
SYN3-206ENST00000461446 DEXIO95424 95 aa11.67□□□□□ -0.54
SYN3-206ENST00000461446 CFBP00751 764 aa11.67□□□□□ -0.54
SYN3-206ENST00000461446 ASGR1P07306 291 aa11.67□□□□□ -0.54
SYN3-206ENST00000461446 HSD17B4P51659 736 aa11.67□□□□□ -0.54
SYN3-206ENST00000461446 TYW1BQ6NUM6 668 aa11.67□□□□□ -0.54
SYN3-206ENST00000461446 TLK2Q86UE8 772 aa11.67□□□□□ -0.54
SYN3-206ENST00000461446 SYTL5Q8TDW5 730 aaPredicted RBP11.67□□□□□ -0.54
SYN3-206ENST00000461446 SNX21Q969T3 373 aa11.67□□□□□ -0.54
SYN3-206ENST00000461446 TSEN34Q9BSV6 310 aaKnown RBP11.67□□□□□ -0.54
SYN3-206ENST00000461446 SPC25Q9HBM1 224 aa11.67□□□□□ -0.54
SYN3-206ENST00000461446 VTA1Q9NP79 307 aa11.67□□□□□ -0.54
SYN3-206ENST00000461446 PRDM5Q9NQX1 630 aaPredicted RBP11.67□□□□□ -0.54
SYN3-206ENST00000461446 STARD7Q9NQZ5 370 aa11.67□□□□□ -0.54
SYN3-206ENST00000461446 MAP3K20Q9NYL2 800 aaKnown RBP11.67□□□□□ -0.54
SYN3-206ENST00000461446 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
SYN3-206ENST00000461446 LRRC37A2A6NM11 1700 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 TRIM43BA6NCK2 446 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 GCOM1H8Y6P7 765 aaPredicted RBP11.66□□□□□ -0.54
SYN3-206ENST00000461446 JAK2O60674 1132 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 PQBP1O60828 265 aaKnown RBP11.66□□□□□ -0.54
SYN3-206ENST00000461446 POLR2MP0CAP2 368 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 FDPSP14324 419 aaKnown RBP11.66□□□□□ -0.54
SYN3-206ENST00000461446 CST5P28325 142 aaPredicted RBP11.66□□□□□ -0.54
SYN3-206ENST00000461446 BMP8BP34820 402 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 NAPAP54920 295 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 PDE4DQ08499 809 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 IQSEC1Q6DN90 963 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 PPP1R18Q6NYC8 613 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 CXCL17Q6UXB2 119 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 SMARCC2Q8TAQ2 1214 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 VTI1AQ96AJ9 217 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 TRIM43Q96BQ3 446 aaPredicted RBP11.66□□□□□ -0.54
SYN3-206ENST00000461446 TAAR1Q96RJ0 339 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 WDR11Q9BZH6 1224 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 UBE2OQ9C0C9 1292 aaKnown RBP11.66□□□□□ -0.54
SYN3-206ENST00000461446 PSTPIP2Q9H939 334 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 PDLIM7Q9NR12 457 aa11.66□□□□□ -0.54
SYN3-206ENST00000461446 ESYT2A0FGR8 921 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 SMCO2A6NFE2 343 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 MOXD2PA6NHM9 499 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 PIK3CDO00329 1044 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 SOX1O00570 391 aaPredicted RBP11.65□□□□□ -0.54
SYN3-206ENST00000461446 MEIS2O14770 477 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 EDNRBP24530 442 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 ITGB8P26012 769 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 HOXA13P31271 388 aaPredicted RBP11.65□□□□□ -0.54
SYN3-206ENST00000461446 MRPL12P52815 198 aaKnown RBP11.65□□□□□ -0.54
SYN3-206ENST00000461446 NKX3-2P78367 333 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 FSCN1Q16658 493 aaKnown RBP11.65□□□□□ -0.54
SYN3-206ENST00000461446 C1orf53Q5VUE5 145 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 TEX2Q8IWB9 1127 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 PCSK9Q8NBP7 692 aaKnown RBP11.65□□□□□ -0.54
SYN3-206ENST00000461446 DNERQ8NFT8 737 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 CCDC12Q8WUD4 166 aaPredicted RBP11.65□□□□□ -0.54
SYN3-206ENST00000461446 GLT1D1Q96MS3 346 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 AIFM3Q96NN9 605 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 LBHD1Q9BQE6 289 aaPredicted RBP11.65□□□□□ -0.54
SYN3-206ENST00000461446 ZMYND12Q9H0C1 365 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 AP5M1Q9H0R1 490 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 SH3GLB2Q9NR46 395 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 VPS54Q9P1Q0 977 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 PRKAG2Q9UGJ0 569 aa11.65□□□□□ -0.54
SYN3-206ENST00000461446 RBM47A0AV96 593 aaKnown RBP11.64□□□□□ -0.55
SYN3-206ENST00000461446 K7ELQ4 463 aaPredicted RBP11.64□□□□□ -0.55
SYN3-206ENST00000461446 HMGN5P82970 282 aaKnown RBP11.64□□□□□ -0.55
SYN3-206ENST00000461446 CUL4AQ13619 759 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 DUSP28Q4G0W2 176 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 USP17L6PQ6QN14 398 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 FAM177A1Q8N128 213 aaPredicted RBP11.64□□□□□ -0.55
SYN3-206ENST00000461446 WASF1Q92558 559 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 COPS5Q92905 334 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 BADQ92934 168 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 CUL5Q93034 780 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 LRCH3Q96II8 777 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 RMDN3Q96TC7 470 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 ALG1Q9BT22 464 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 GLT8D2Q9H1C3 349 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 C6orf50Q9HD87 102 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 RIC8AQ9NPQ8 531 aa11.64□□□□□ -0.55
SYN3-206ENST00000461446 ELP1O95163 1332 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 LAMA3Q16787 3333 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 LOC102724159A0A0B4J2E5 919 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 A0A1W2PPC1 479 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 ARIH2O95376 493 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 CLTBP09497 229 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 XBP1P17861 261 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 EIF2AK2P19525 551 aaKnown RBP11.63□□□□□ -0.55
SYN3-206ENST00000461446 GNA11P29992 359 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 CDK7P50613 346 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 ADCY7P51828 1080 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 NLRP5P59047 1200 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 PSMC6P62333 389 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 FAAP100Q0VG06 881 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 PWP2Q15269 919 aaKnown RBP11.63□□□□□ -0.55
SYN3-206ENST00000461446 SEPT14Q6ZU15 432 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 ANKRD33Q7Z3H0 272 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 FCHSD1Q86WN1 690 aa11.63□□□□□ -0.55
SYN3-206ENST00000461446 TDHQ8IZJ6 230 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms