RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 DDX41Q9UJV9 622 aaKnown RBP11.21□□□□□ -0.61
CD40-203ENST00000461171 TANC1Q9C0D5 1861 aa11.21□□□□□ -0.62
CD40-203ENST00000461171 FRMPD4Q14CM0 1322 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 PNMA6FA0A0J9YX94 578 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.2□□□□□ -0.62
CD40-203ENST00000461171 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.2□□□□□ -0.62
CD40-203ENST00000461171 SH2B2O14492 632 aaPredicted RBP11.2□□□□□ -0.62
CD40-203ENST00000461171 SLC27A2O14975 620 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 EIF3JO75822 258 aaKnown RBP11.2□□□□□ -0.62
CD40-203ENST00000461171 GH1P01241 217 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 ACRP10323 421 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 HOXD8P13378 290 aaPredicted RBP11.2□□□□□ -0.62
CD40-203ENST00000461171 DNAJB2P25686 324 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 HOXA13P31271 388 aaPredicted RBP11.2□□□□□ -0.62
CD40-203ENST00000461171 PTPN11Q06124 597 aaPredicted RBP11.2□□□□□ -0.62
CD40-203ENST00000461171 TRAF1Q13077 416 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 NECTIN1Q15223 517 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 LY6KQ17RY6 165 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 NBPF20Q3BBV1 942 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 ZNF365Q70YC5 407 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 CATIPQ7Z7H3 387 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 VSIG10LQ86VR7 867 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 IL31RAQ8NI17 732 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 AFG1LQ8WV93 481 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 HERVK_113Q902F9 699 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 KAT2BQ92831 832 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 CDX2Q99626 313 aaPredicted RBP11.2□□□□□ -0.62
CD40-203ENST00000461171 SPZ1Q9BXG8 430 aa11.2□□□□□ -0.62
CD40-203ENST00000461171 PRC1O43663 620 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 SUPT20HL2P0C7V6 817 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 CYP2C9P11712 490 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 SMARCA1P28370 1054 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 MCM5P33992 734 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 PGM5Q15124 567 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 SESTD1Q86VW0 696 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 TMEM87BQ96K49 555 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 CTAGE1Q96RT6 745 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 MYL10Q9BUA6 226 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 CXXC1Q9P0U4 656 aaPredicted RBP11.19□□□□□ -0.62
CD40-203ENST00000461171 MRVI1Q9Y6F6 885 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 UNC80Q8N2C7 3258 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 CHD7Q9P2D1 2997 aa11.19□□□□□ -0.62
CD40-203ENST00000461171 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
CD40-203ENST00000461171 PLEKHA8P1O95397 391 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 F2P00734 622 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 POLR2MP0CAP2 368 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 KIF5BP33176 963 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 LIFRP42702 1097 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 CCL23P55773 120 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 FAM47CQ5HY64 1035 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 CASC1Q6TDU7 716 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 SLC17A8Q8NDX2 589 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 PPTC7Q8NI37 304 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 CTCFLQ8NI51 663 aaPredicted RBP11.18□□□□□ -0.62
CD40-203ENST00000461171 PPP1R13LQ8WUF5 828 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 SCLYQ96I15 445 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 PBX4Q9BYU1 374 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 ANO2Q9NQ90 1003 aa11.18□□□□□ -0.62
CD40-203ENST00000461171 MYO9BQ13459 2157 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 GRXCR1A8MXD5 290 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 HAS3O00219 553 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 FGBP02675 491 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 PFKMP08237 780 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 UBA1P22314 1058 aaKnown RBP11.17□□□□□ -0.62
CD40-203ENST00000461171 PBX2P40425 430 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 LAMC2Q13753 1193 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 MYSM1Q5VVJ2 828 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 SGMS1Q86VZ5 419 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 MYLIPQ8WY64 445 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 TIFAQ96CG3 184 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 INPP4AQ96PE3 977 aaPredicted RBP11.17□□□□□ -0.62
CD40-203ENST00000461171 LZTS2Q9BRK4 669 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 SCN5AQ14524 2016 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 EYSQ5T1H1 3165 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 TET1Q8NFU7 2136 aa11.17□□□□□ -0.62
CD40-203ENST00000461171 PRUNE2Q8WUY3 3088 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 PIK3CDO00329 1044 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 MEIS2O14770 477 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 TGFB3P10600 412 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 MYCLP12524 364 aaPredicted RBP11.16□□□□□ -0.62
CD40-203ENST00000461171 RXRAP19793 462 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 CASTP20810 708 aaKnown RBP11.16□□□□□ -0.62
CD40-203ENST00000461171 CCND2P30279 289 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 GNAQP50148 359 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 MRPS9P82933 396 aaKnown RBP11.16□□□□□ -0.62
CD40-203ENST00000461171 SP2Q02086 613 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 RBL2Q08999 1139 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 GRIN2CQ14957 1233 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 DGKDQ16760 1214 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 CELF3Q5SZQ8 465 aaKnown RBP11.16□□□□□ -0.62
CD40-203ENST00000461171 KCNV1Q6PIU1 500 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 TMTC3Q6ZXV5 915 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 OTOP2Q7RTS6 562 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 FCHSD1Q86WN1 690 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 RPUSD2Q8IZ73 545 aaKnown RBP11.16□□□□□ -0.62
CD40-203ENST00000461171 TMTC2Q8N394 836 aa11.16□□□□□ -0.62
CD40-203ENST00000461171 SRBD1Q8N5C6 995 aaKnown RBP11.16□□□□□ -0.62
CD40-203ENST00000461171 GPKOWQ92917 476 aaPredicted RBP eCLIP11.16□□□□□ -0.62
CD40-203ENST00000461171 RRP36Q96EU6 259 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms