RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 SCINQ9Y6U3 715 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 USP17L3A6NCW0 530 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 USP17L4A6NCW7 530 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 LRRIQ4A6NIV6 560 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 ZNF658Q5TYW1 1059 aaPredicted RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 SYDE2Q5VT97 1194 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 USP17L1Q7RTZ2 530 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 CEP120Q8N960 986 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 PROCA1Q8NCQ7 364 aaPredicted RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 ST7Q9NRC1 585 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 DDX41Q9UJV9 622 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 SERPINB2P05120 415 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 PDIA3P30101 505 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 DHX38Q92620 1227 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 ARHGEF2Q92974 986 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 SLF1Q9BQI6 1058 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 MAP3K4Q9Y6R4 1608 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 SCP2P22307 547 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 EAF2Q96CJ1 260 aaPredicted RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 CARD6Q9BX69 1037 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 RWDD2AQ9UIY3 292 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 RIPOR2Q9Y4F9 1068 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 DBN1Q16643 649 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 SPATA31E1Q6ZUB1 1445 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 ARHGAP27Q6ZUM4 889 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 KRT27Q7Z3Y8 459 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 GTF3C2Q8WUA4 911 aaPredicted RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 MASTLQ96GX5 879 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 TRPV6Q9H1D0 765 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 CNOT10Q9H9A5 744 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 SERPINA10Q9UK55 444 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 CPSF3Q9UKF6 684 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 WDR64B1ANS9 1081 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 SETSIPP0DME0 302 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 ARL4AP40617 200 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 CDC42EP1Q00587 391 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 DALRD3Q5D0E6 543 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 MCPH1Q8NEM0 835 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 FAM71BQ8TC56 605 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 CCDC124Q96CT7 223 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 PNMA6FA0A0J9YX94 578 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 MCF2LO15068 1137 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 LUC7L3O95232 432 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 ANXA13P27216 316 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 COPB1P53618 953 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 POLA2Q14181 598 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 SLMAPQ14BN4 828 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 PROM2Q8N271 834 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 PRPF38AQ8NAV1 312 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 XPO4Q9C0E2 1151 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 QTRT2Q9H974 415 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 KMT5AQ9NQR1 393 aa9.18□□□□□ -0.94
MCF2L2-205ENST00000461074 MGEA5O60502 916 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 DDX5P17844 614 aaKnown RBP9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 PTGDRQ13258 359 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 UNC5CLQ8IV45 518 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 P2RX5Q93086 422 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 RILPQ96NA2 401 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 CDHR2Q9BYE9 1310 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 DNAJC8O75937 253 aaPredicted RBP9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 SLC8A1P32418 973 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 IL9RQ01113 521 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 APOBEC3FQ8IUX4 373 aaKnown RBP9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 KLHL7Q8IXQ5 586 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 CCDC13Q8IYE1 715 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 MIPOL1Q8TD10 442 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 RABGGTAQ92696 567 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 DRC3Q9H069 523 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 EPS15L1Q9UBC2 864 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 MTMR6Q9Y217 621 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 KCNK3O14649 394 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 PPFIA2O75334 1257 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 GYG1P46976 350 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 EIF3BP55884 814 aaKnown RBP9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 KCNV1Q6PIU1 500 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 EPN1Q9Y6I3 576 aaPredicted RBP9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 TTC4O95801 387 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 COG7P83436 770 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 PNOCQ13519 176 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 USPL1Q5W0Q7 1092 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 CTAGE3PQ8IX95 158 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 FAM186BQ8IYM0 893 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 PARVGQ9HBI0 331 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 SEPT9Q9UHD8 586 aaPredicted RBP9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 ERBB3P21860 1342 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 A0A0D9SFI3 127 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 SLFN14P0C7P3 912 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 BCAMP50895 628 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 APOA5Q6Q788 366 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 PLCD3Q8N3E9 789 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 KCTD17Q8N5Z5 321 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 EXOC4Q96A65 974 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 MAPK8IP1Q9UQF2 711 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 AP3M2P53677 418 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 ETF1P62495 437 aaKnown RBP9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 MECOMQ03112 1051 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 GOLGA8FQ08AF8 430 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 GOLGA8DPQ0D2H9 430 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 KLHDC4Q8TBB5 520 aa9.17□□□□□ -0.94
MCF2L2-205ENST00000461074 TBC1D7Q9P0N9 293 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms