RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 TDRD12Q587J7 1177 aaKnown RBP13.4□□□□□ -0.26
GCOM1-203ENST00000460962 TPTE2Q6XPS3 522 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 TSG101Q99816 390 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 RAB34Q9BZG1 259 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 TMEM260Q9NX78 707 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 SMARCAL1Q9NZC9 954 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 STIM2Q9P246 746 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 SRP68Q9UHB9 627 aaKnown RBP13.4□□□□□ -0.26
GCOM1-203ENST00000460962 EPHB4P54760 987 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 GRIK5Q16478 980 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 DNAJC21Q5F1R6 531 aaKnown RBP13.4□□□□□ -0.26
GCOM1-203ENST00000460962 RUFY1Q96T51 708 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 COL5A3P25940 1745 aaPredicted RBP13.4□□□□□ -0.26
GCOM1-203ENST00000460962 IRS2Q9Y4H2 1338 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 NCK2O43639 380 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 SHOX2O60902 331 aaPredicted RBP13.4□□□□□ -0.26
GCOM1-203ENST00000460962 GFPT1Q06210 699 aaPredicted RBP13.4□□□□□ -0.26
GCOM1-203ENST00000460962 C8orf74Q6P047 294 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.4□□□□□ -0.26
GCOM1-203ENST00000460962 NEDD1Q8NHV4 660 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 BAP1Q92560 729 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 NOX5Q96PH1 765 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 PNMA5Q96PV4 448 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 UBA5Q9GZZ9 404 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 EHD2Q9NZN4 543 aa13.4□□□□□ -0.26
GCOM1-203ENST00000460962 ANKRD65E5RJM6 399 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 OPA1O60313 960 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
GCOM1-203ENST00000460962 CORO7P57737 925 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 RASSF7Q02833 373 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 PDXDC1Q6P996 788 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 SNX29Q8TEQ0 813 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 MTMR9Q96QG7 549 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 NARFQ9UHQ1 456 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 NAV1Q8NEY1 1877 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 ESYT2A0FGR8 921 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 POTEMA6NI47 508 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 GOLGA8KD6RF30 607 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 PJA2O43164 708 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 ZPR1O75312 459 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 PPFIA1Q13136 1202 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 KRT79Q5XKE5 535 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 HAUS3Q68CZ6 603 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 EMBQ6PCB8 327 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 LRRC55Q6ZSA7 311 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 C16orf86Q6ZW13 317 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 RAD54LQ92698 747 aa13.39□□□□□ -0.27
GCOM1-203ENST00000460962 RGL2O15211 777 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 BUB1O43683 1085 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 SLC1A4P43007 532 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 LRRC41Q15345 812 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 DDX12PQ92771 950 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 MTMR8Q96EF0 704 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 CEP95Q96GE4 821 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 LRRC27Q9C0I9 530 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 SALL4Q9UJQ4 1053 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 SNED1Q8TER0 1413 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 SSU72P8A0A1W2PR75 194 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 SLC37A4O43826 429 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 TDP2O95551 362 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 BTDP43251 543 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 ZNF804AQ7Z570 1209 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 CCDC155Q8N6L0 562 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 TLR10Q9BXR5 811 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 CAPS2Q9BXY5 557 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 EDEM3Q9BZQ6 932 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 NLRC4Q9NPP4 1024 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 RIC8AQ9NPQ8 531 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 CNTNAP4Q9C0A0 1308 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 USP17L5A8MUK1 530 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 HSF2BPO75031 334 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 TM4SF1P30408 202 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 IRAK1P51617 712 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 CCDC40Q4G0X9 1142 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 GBP6Q6ZN66 633 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 TEX11Q8IYF3 940 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 RTFDC1Q9BY42 306 aaPredicted RBP13.38□□□□□ -0.27
GCOM1-203ENST00000460962 TSKSQ9UJT2 592 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 LEMD3Q9Y2U8 911 aa13.38□□□□□ -0.27
GCOM1-203ENST00000460962 ADCY7P51828 1080 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 PSMD2Q13200 908 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 SLC9C1Q4G0N8 1177 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 CFAP221Q4G0U5 840 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 MYOCDQ8IZQ8 938 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 RNF10Q8N5U6 811 aaKnown RBP13.37□□□□□ -0.27
GCOM1-203ENST00000460962 PPM1EQ8WY54 764 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 LUC7LQ9NQ29 371 aaKnown RBP13.37□□□□□ -0.27
GCOM1-203ENST00000460962 RBM12Q9NTZ6 932 aaKnown RBP13.37□□□□□ -0.27
GCOM1-203ENST00000460962 hCG_1984214I3L0E3 225 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 PDIA5Q14554 519 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 ASTE1Q2TB18 679 aaPredicted RBP13.37□□□□□ -0.27
GCOM1-203ENST00000460962 TTC31Q49AM3 519 aaPredicted RBP13.37□□□□□ -0.27
GCOM1-203ENST00000460962 KLHDC7AQ5VTJ3 777 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 ALS2CLQ60I27 953 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 CERS3Q8IU89 383 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 PROM2Q8N271 834 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 ZNF713Q8N859 430 aaPredicted RBP13.37□□□□□ -0.27
GCOM1-203ENST00000460962 GLIS3Q8NEA6 775 aa13.37□□□□□ -0.27
GCOM1-203ENST00000460962 COA7Q96BR5 231 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms