RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 PLA2G4BP0C869 781 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 DDIT3P35638 169 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 ADAMTS13Q76LX8 1427 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 WDR11Q9BZH6 1224 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 KRT19P08727 400 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 PDE6CP51160 858 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 ADAT2Q7Z6V5 191 aaKnown RBP16.16■□□□□ 0.18
PTPRU-205ENST00000460170 AS3MTQ9HBK9 375 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 PI4KBQ9UBF8 816 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 UTYO14607 1347 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 ZMYND10O75800 440 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 GDF11O95390 407 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 TRPC5Q9UL62 973 aaPredicted RBP16.15■□□□□ 0.18
PTPRU-205ENST00000460170 GINS2Q9Y248 185 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 COL15A1P39059 1388 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 NMT2O60551 498 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 SNX16P57768 344 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 MYL7Q01449 175 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 FYB2Q5VWT5 728 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 GPR101Q96P66 508 aaPredicted RBP16.15■□□□□ 0.18
PTPRU-205ENST00000460170 ZNF577Q9BSK1 485 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 RNF14Q9UBS8 474 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 TRIM37O94972 964 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 KRT15P19012 456 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 TOGARAM2Q6ZUX3 1019 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 GLG1Q92896 1179 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 MEIS1O00470 390 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 PRR29P0C7W0 189 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 DLATP10515 647 aaKnown RBP16.15■□□□□ 0.18
PTPRU-205ENST00000460170 AOC3Q16853 763 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 USP32Q8NFA0 1604 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 EPHB4P54760 987 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 DMP1Q13316 513 aaPredicted RBP16.15■□□□□ 0.18
PTPRU-205ENST00000460170 STIM2Q9P246 746 aa16.15■□□□□ 0.18
PTPRU-205ENST00000460170 KIF11P52732 1056 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 UBXN2AP68543 259 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 NDC80O14777 642 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 HHATQ5VTY9 493 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 NAA35Q5VZE5 725 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 FAM133AQ8N9E0 248 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 NACC1Q96RE7 527 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 COA1Q9GZY4 146 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.14■□□□□ 0.17
PTPRU-205ENST00000460170 NCOA3Q9Y6Q9 1424 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 LGALS16A8MUM7 142 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 HEXIM1O94992 359 aaKnown RBP16.14■□□□□ 0.17
PTPRU-205ENST00000460170 MOCS3O95396 460 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 RFX5P48382 616 aaPredicted RBP16.14■□□□□ 0.17
PTPRU-205ENST00000460170 DMTNQ08495 405 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 CEP63Q96MT8 703 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 CLRN2A0PK11 232 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 DCAF15Q66K64 600 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 VTI1AQ96AJ9 217 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 PCDHA13Q9Y5I0 950 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 TAF6LQ9Y6J9 622 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 C1orf167Q5SNV9 1468 aa16.14■□□□□ 0.17
PTPRU-205ENST00000460170 CLIC2O15247 247 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 IQCB1Q15051 598 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 PDIA6Q15084 440 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 HOMER3Q9NSC5 361 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 SERPING1P05155 500 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 CXCR5P32302 372 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 YWHAEP62258 255 aaKnown RBP16.13■□□□□ 0.17
PTPRU-205ENST00000460170 CDC37Q16543 378 aaPredicted RBP16.13■□□□□ 0.17
PTPRU-205ENST00000460170 SYDE2Q5VT97 1194 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 UNC13DQ70J99 1090 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 VSIG1Q86XK7 387 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 EPB41L5Q9HCM4 733 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 ABHD10Q9NUJ1 306 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 USP27XA6NNY8 438 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 TBC1D8O95759 1140 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 PRCPP42785 496 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 IRX3P78415 501 aaPredicted RBP16.13■□□□□ 0.17
PTPRU-205ENST00000460170 PPP1R21Q6ZMI0 780 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 GRK7Q8WTQ7 553 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 SERPINA10Q9UK55 444 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 IVNS1ABPQ9Y6Y0 642 aa16.13■□□□□ 0.17
PTPRU-205ENST00000460170 PNMA6AP0CW24 399 aaPredicted RBP16.13■□□□□ 0.17
PTPRU-205ENST00000460170 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.13■□□□□ 0.17
PTPRU-205ENST00000460170 TRIM49BA6NDI0 452 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 ECM2O94769 699 aaPredicted RBP16.12■□□□□ 0.17
PTPRU-205ENST00000460170 CSF1RP07333 972 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 POMGNT1Q8WZA1 660 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 ANO3Q9BYT9 981 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 CPVLQ9H3G5 476 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 FAN1Q9Y2M0 1017 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 HGSO14964 777 aaPredicted RBP16.12■□□□□ 0.17
PTPRU-205ENST00000460170 FOXN1O15353 648 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 IFNB1P01574 187 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 SLC44A5Q8NCS7 719 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 FAM84BQ96KN1 310 aaPredicted RBP16.12■□□□□ 0.17
PTPRU-205ENST00000460170 GUCY1A2P33402 732 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 ADCY8P40145 1251 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 C2orf54Q08AI8 447 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 CCDC89Q8N998 374 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 VPS37BQ9H9H4 285 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 ORC4O43929 436 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 PRPF6O94906 941 aaKnown RBP16.12■□□□□ 0.17
PTPRU-205ENST00000460170 FTCDO95954 541 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 VPS41P49754 854 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms