RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 GLP2RO95838 553 aa16.16■□□□□ 0.18
PCOLCE-202ENST00000460002 BMPR1AP36894 532 aa16.16■□□□□ 0.18
PCOLCE-202ENST00000460002 ALDH5A1P51649 535 aaPredicted RBP16.16■□□□□ 0.18
PCOLCE-202ENST00000460002 PPP2R5BQ15173 497 aa16.16■□□□□ 0.18
PCOLCE-202ENST00000460002 TKFCQ3LXA3 575 aa16.16■□□□□ 0.18
PCOLCE-202ENST00000460002 ADGRD2Q7Z7M1 963 aa16.16■□□□□ 0.18
PCOLCE-202ENST00000460002 LRRC47Q8N1G4 583 aaKnown RBP16.16■□□□□ 0.18
PCOLCE-202ENST00000460002 KAT2BQ92831 832 aa16.16■□□□□ 0.18
PCOLCE-202ENST00000460002 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
PCOLCE-202ENST00000460002 GTF2IRD1Q9UHL9 959 aa16.16■□□□□ 0.18
PCOLCE-202ENST00000460002 BARX2Q9UMQ3 279 aaPredicted RBP16.16■□□□□ 0.18
PCOLCE-202ENST00000460002 RALGAPA2Q2PPJ7 1873 aa16.16■□□□□ 0.18
PCOLCE-202ENST00000460002 NKRFO15226 690 aaKnown RBP eCLIP16.15■□□□□ 0.18
PCOLCE-202ENST00000460002 MMP1P03956 469 aa16.15■□□□□ 0.18
PCOLCE-202ENST00000460002 NSMFQ6X4W1 530 aa16.15■□□□□ 0.18
PCOLCE-202ENST00000460002 FIBCD1Q8N539 461 aa16.15■□□□□ 0.18
PCOLCE-202ENST00000460002 EFHBQ8N7U6 833 aa16.15■□□□□ 0.18
PCOLCE-202ENST00000460002 EAF2Q96CJ1 260 aaPredicted RBP16.15■□□□□ 0.18
PCOLCE-202ENST00000460002 CLIP2Q9UDT6 1046 aa16.15■□□□□ 0.18
PCOLCE-202ENST00000460002 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.14■□□□□ 0.17
PCOLCE-202ENST00000460002 FDX1P10109 184 aa16.14■□□□□ 0.17
PCOLCE-202ENST00000460002 PTK7Q13308 1070 aa16.14■□□□□ 0.17
PCOLCE-202ENST00000460002 OS9Q13438 667 aaPredicted RBP16.14■□□□□ 0.17
PCOLCE-202ENST00000460002 PLEKHG4Q58EX7 1191 aa16.14■□□□□ 0.17
PCOLCE-202ENST00000460002 ASTLQ6HA08 431 aaPredicted RBP16.14■□□□□ 0.17
PCOLCE-202ENST00000460002 ZBTB33Q86T24 672 aa16.14■□□□□ 0.17
PCOLCE-202ENST00000460002 API5Q9BZZ5 524 aaKnown RBP16.14■□□□□ 0.17
PCOLCE-202ENST00000460002 HDAC6Q9UBN7 1215 aa16.14■□□□□ 0.17
PCOLCE-202ENST00000460002 MAP1BP46821 2468 aaKnown RBP16.13■□□□□ 0.17
PCOLCE-202ENST00000460002 BAZ2AQ9UIF9 1905 aaKnown RBP16.13■□□□□ 0.17
PCOLCE-202ENST00000460002 ATF7P17544 494 aaPredicted RBP16.13■□□□□ 0.17
PCOLCE-202ENST00000460002 RASA1P20936 1047 aa16.13■□□□□ 0.17
PCOLCE-202ENST00000460002 SNAP25P60880 206 aa16.13■□□□□ 0.17
PCOLCE-202ENST00000460002 RPAP2Q8IXW5 612 aaPredicted RBP16.13■□□□□ 0.17
PCOLCE-202ENST00000460002 KREMEN2Q8NCW0 462 aa16.13■□□□□ 0.17
PCOLCE-202ENST00000460002 SUSD6Q92537 303 aa16.13■□□□□ 0.17
PCOLCE-202ENST00000460002 COL26A1Q96A83 441 aa16.13■□□□□ 0.17
PCOLCE-202ENST00000460002 IFIH1Q9BYX4 1025 aaKnown RBP16.13■□□□□ 0.17
PCOLCE-202ENST00000460002 EMSYQ7Z589 1322 aa16.13■□□□□ 0.17
PCOLCE-202ENST00000460002 CEP250Q9BV73 2442 aa16.13■□□□□ 0.17
PCOLCE-202ENST00000460002 TMEM232C9JQI7 657 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 MBD4O95243 580 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 ARIH2O95376 493 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 ARP10275 920 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 BMP3P12645 472 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 DNAJB1P25685 340 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 ZNF200P98182 395 aaPredicted RBP16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 BAATQ14032 418 aaPredicted RBP16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 SLFNL1Q499Z3 407 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 KCNG4Q8TDN1 519 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 SCFD2Q8WU76 684 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 AFG1LQ8WV93 481 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 IL17RAQ96F46 866 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 OSBPL7Q9BZF2 842 aa16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 ADD3Q9UEY8 706 aaKnown RBP16.12■□□□□ 0.17
PCOLCE-202ENST00000460002 IGKV6D-41A0A0C4DH26 115 aa16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 BRD1O95696 1058 aa16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 LMNAP02545 664 aaKnown RBP16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 GNAI2P04899 355 aa16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 MMP3P08254 477 aa16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 TXNP10599 105 aaKnown RBP16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 NRIP1P48552 1158 aa16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 STAT2P52630 851 aa16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 PDE4BQ07343 736 aa16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 POLA2Q14181 598 aa16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 CTR9Q6PD62 1173 aa16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 MKL1Q969V6 931 aa16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 SMOC2Q9H3U7 446 aa16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 USP24Q9UPU5 2620 aa16.11■□□□□ 0.17
PCOLCE-202ENST00000460002 LOC102724159A0A0B4J2E5 919 aa16.1■□□□□ 0.17
PCOLCE-202ENST00000460002 HIC1Q14526 733 aa16.1■□□□□ 0.17
PCOLCE-202ENST00000460002 PWP2Q15269 919 aaKnown RBP16.1■□□□□ 0.17
PCOLCE-202ENST00000460002 SLFN13Q68D06 897 aa16.1■□□□□ 0.17
PCOLCE-202ENST00000460002 C7orf31Q8N865 590 aa16.1■□□□□ 0.17
PCOLCE-202ENST00000460002 GMCL1P1Q8NEA9 526 aa16.1■□□□□ 0.17
PCOLCE-202ENST00000460002 CLP1Q92989 425 aaKnown RBP16.1■□□□□ 0.17
PCOLCE-202ENST00000460002 PPP2R3CQ969Q6 453 aa16.1■□□□□ 0.17
PCOLCE-202ENST00000460002 PLAGL2Q9UPG8 496 aa16.1■□□□□ 0.17
PCOLCE-202ENST00000460002 RWDD3Q9Y3V2 267 aa16.1■□□□□ 0.17
PCOLCE-202ENST00000460002 ZBED9Q6R2W3 1325 aa16.1■□□□□ 0.17
PCOLCE-202ENST00000460002 RSPH10B2B2RC85 870 aa16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 SURF6O75683 361 aaKnown RBP16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 RSPH10BP0C881 870 aa16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 SP100P23497 879 aaPredicted RBP16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 CLCN5P51795 746 aa16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 RBM10P98175 930 aaKnown RBP16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 MTMR3Q13615 1198 aa16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 TTF1Q15361 905 aaPredicted RBP16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 ANGPT1Q15389 498 aa16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 RSPO4Q2I0M5 234 aaPredicted RBP16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 RBM23Q86U06 439 aaKnown RBP16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 UBALD2Q8IYN6 164 aa16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 STK11IPQ8N1F8 1099 aa16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 SEPT8Q92599 483 aa16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 ALG1Q9BT22 464 aa16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 RC3H2Q9HBD1 1191 aaKnown RBP16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 ISY1Q9ULR0 285 aaKnown RBP16.09■□□□□ 0.17
PCOLCE-202ENST00000460002 THPOP40225 353 aa16.08■□□□□ 0.16
PCOLCE-202ENST00000460002 PSEN2P49810 448 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms