RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 SLC16A2P36021 539 aa15.52■□□□□ 0.08
SNHG17-208ENST00000456953 NOVP48745 357 aa15.52■□□□□ 0.08
SNHG17-208ENST00000456953 RPS6P62753 249 aaKnown RBP15.52■□□□□ 0.08
SNHG17-208ENST00000456953 ZP2Q05996 745 aa15.52■□□□□ 0.08
SNHG17-208ENST00000456953 TCTN1Q2MV58 587 aa15.52■□□□□ 0.08
SNHG17-208ENST00000456953 TTBK2Q6IQ55 1244 aa15.52■□□□□ 0.08
SNHG17-208ENST00000456953 FAM117BQ6P1L5 589 aa15.52■□□□□ 0.08
SNHG17-208ENST00000456953 AFG1LQ8WV93 481 aa15.52■□□□□ 0.08
SNHG17-208ENST00000456953 C17orf80Q9BSJ5 609 aa15.52■□□□□ 0.08
SNHG17-208ENST00000456953 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNHG17-208ENST00000456953 ARIH2O95376 493 aa15.51■□□□□ 0.07
SNHG17-208ENST00000456953 MMP3P08254 477 aa15.51■□□□□ 0.07
SNHG17-208ENST00000456953 COL19A1Q14993 1142 aa15.51■□□□□ 0.07
SNHG17-208ENST00000456953 CCDC62Q6P9F0 684 aa15.51■□□□□ 0.07
SNHG17-208ENST00000456953 KAT2BQ92831 832 aa15.51■□□□□ 0.07
SNHG17-208ENST00000456953 PABPC5Q96DU9 382 aaKnown RBP15.51■□□□□ 0.07
SNHG17-208ENST00000456953 MFSD14AQ96MC6 490 aa15.51■□□□□ 0.07
SNHG17-208ENST00000456953 SAMD11Q96NU1 681 aa15.51■□□□□ 0.07
SNHG17-208ENST00000456953 CHMP4BQ9H444 224 aaKnown RBP15.51■□□□□ 0.07
SNHG17-208ENST00000456953 GTF2IRD1Q9UHL9 959 aa15.51■□□□□ 0.07
SNHG17-208ENST00000456953 C19orf67A6NJJ6 358 aa15.5■□□□□ 0.07
SNHG17-208ENST00000456953 GH1P01241 217 aa15.5■□□□□ 0.07
SNHG17-208ENST00000456953 CASTP20810 708 aaKnown RBP15.5■□□□□ 0.07
SNHG17-208ENST00000456953 HTRA4P83105 476 aaPredicted RBP15.5■□□□□ 0.07
SNHG17-208ENST00000456953 PTK7Q13308 1070 aa15.5■□□□□ 0.07
SNHG17-208ENST00000456953 HFE2Q6ZVN8 426 aa15.5■□□□□ 0.07
SNHG17-208ENST00000456953 ADHFE1Q8IWW8 467 aa15.5■□□□□ 0.07
SNHG17-208ENST00000456953 C7orf31Q8N865 590 aa15.5■□□□□ 0.07
SNHG17-208ENST00000456953 BANK1Q8NDB2 785 aa15.5■□□□□ 0.07
SNHG17-208ENST00000456953 SP7Q8TDD2 431 aaPredicted RBP15.5■□□□□ 0.07
SNHG17-208ENST00000456953 UPF3BQ9BZI7 483 aaKnown RBP15.5■□□□□ 0.07
SNHG17-208ENST00000456953 EMSYQ7Z589 1322 aa15.49■□□□□ 0.07
SNHG17-208ENST00000456953 WDR19Q8NEZ3 1342 aa15.49■□□□□ 0.07
SNHG17-208ENST00000456953 RANBP6O60518 1105 aaKnown RBP15.49■□□□□ 0.07
SNHG17-208ENST00000456953 LGR5O75473 907 aa15.49■□□□□ 0.07
SNHG17-208ENST00000456953 AMHP03971 560 aa15.49■□□□□ 0.07
SNHG17-208ENST00000456953 ARHGAP1Q07960 439 aa15.49■□□□□ 0.07
SNHG17-208ENST00000456953 DGKDQ16760 1214 aa15.49■□□□□ 0.07
SNHG17-208ENST00000456953 EPC2Q52LR7 807 aa15.49■□□□□ 0.07
SNHG17-208ENST00000456953 TRAF7Q6Q0C0 670 aa15.49■□□□□ 0.07
SNHG17-208ENST00000456953 SEC62Q99442 399 aaKnown RBP15.49■□□□□ 0.07
SNHG17-208ENST00000456953 HDAC6Q9UBN7 1215 aa15.49■□□□□ 0.07
SNHG17-208ENST00000456953 MKRN4PQ13434 485 aaPredicted RBP15.48■□□□□ 0.07
SNHG17-208ENST00000456953 MBTPS1Q14703 1052 aa15.48■□□□□ 0.07
SNHG17-208ENST00000456953 LY6KQ17RY6 165 aa15.48■□□□□ 0.07
SNHG17-208ENST00000456953 TRIM71Q2Q1W2 868 aaKnown RBP15.48■□□□□ 0.07
SNHG17-208ENST00000456953 TCEAL5Q5H9L2 206 aa15.48■□□□□ 0.07
SNHG17-208ENST00000456953 ZNF618Q5T7W0 954 aa15.48■□□□□ 0.07
SNHG17-208ENST00000456953 TSHZ3Q63HK5 1081 aa15.48■□□□□ 0.07
SNHG17-208ENST00000456953 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.48■□□□□ 0.072e-9■■■■■ 26.9
SNHG17-208ENST00000456953 RGS22Q8NE09 1264 aa15.48■□□□□ 0.07
SNHG17-208ENST00000456953 KATNAL1Q9BW62 490 aa15.48■□□□□ 0.07
SNHG17-208ENST00000456953 GPCPD1Q9NPB8 672 aa15.48■□□□□ 0.07
SNHG17-208ENST00000456953 INCENPQ9NQS7 918 aa15.48■□□□□ 0.07
SNHG17-208ENST00000456953 MICAL3Q7RTP6 2002 aa15.48■□□□□ 0.07
SNHG17-208ENST00000456953 FRMPD2Q68DX3 1309 aaPredicted RBP15.47■□□□□ 0.07
SNHG17-208ENST00000456953 H3BNC9 293 aa15.47■□□□□ 0.07
SNHG17-208ENST00000456953 NCK2O43639 380 aa15.47■□□□□ 0.07
SNHG17-208ENST00000456953 TOP1P11387 765 aaKnown RBP15.47■□□□□ 0.07
SNHG17-208ENST00000456953 PSEN2P49810 448 aa15.47■□□□□ 0.07
SNHG17-208ENST00000456953 CTDSPL2Q05D32 466 aa15.47■□□□□ 0.07
SNHG17-208ENST00000456953 EP400NLQ6ZTU2 488 aa15.47■□□□□ 0.07
SNHG17-208ENST00000456953 CHST3Q7LGC8 479 aa15.47■□□□□ 0.07
SNHG17-208ENST00000456953 MYOCDQ8IZQ8 938 aa15.47■□□□□ 0.07
SNHG17-208ENST00000456953 EMID1Q96A84 441 aaPredicted RBP15.47■□□□□ 0.07
SNHG17-208ENST00000456953 POP1Q99575 1024 aaKnown RBP15.47■□□□□ 0.07
SNHG17-208ENST00000456953 MAF1Q9H063 256 aa15.47■□□□□ 0.07
SNHG17-208ENST00000456953 NSUN3Q9H649 340 aaKnown RBP15.47■□□□□ 0.07
SNHG17-208ENST00000456953 ANAPC4Q9UJX5 808 aa15.47■□□□□ 0.07
SNHG17-208ENST00000456953 ZFHX2Q9C0A1 2572 aaPredicted RBP15.46■□□□□ 0.07
SNHG17-208ENST00000456953 ORC4O43929 436 aa15.46■□□□□ 0.07
SNHG17-208ENST00000456953 F2P00734 622 aa15.46■□□□□ 0.07
SNHG17-208ENST00000456953 IRS1P35568 1242 aa15.46■□□□□ 0.07
SNHG17-208ENST00000456953 GPM6BQ13491 265 aa15.46■□□□□ 0.07
SNHG17-208ENST00000456953 MFSD10Q14728 455 aa15.46■□□□□ 0.07
SNHG17-208ENST00000456953 ZMYM1Q5SVZ6 1142 aa15.46■□□□□ 0.07
SNHG17-208ENST00000456953 SEPT14Q6ZU15 432 aa15.46■□□□□ 0.07
SNHG17-208ENST00000456953 WNT8BQ93098 351 aa15.46■□□□□ 0.07
SNHG17-208ENST00000456953 TMEM47Q9BQJ4 181 aa15.46■□□□□ 0.07
SNHG17-208ENST00000456953 COL4A6Q14031 1691 aa15.46■□□□□ 0.07
SNHG17-208ENST00000456953 HAS3O00219 553 aa15.45■□□□□ 0.06
SNHG17-208ENST00000456953 FOXP2O15409 715 aa15.45■□□□□ 0.06
SNHG17-208ENST00000456953 PDHBP11177 359 aa15.45■□□□□ 0.06
SNHG17-208ENST00000456953 KIAA0753Q2KHM9 967 aa15.45■□□□□ 0.06
SNHG17-208ENST00000456953 HERC4Q5GLZ8 1057 aaPredicted RBP15.45■□□□□ 0.06
SNHG17-208ENST00000456953 C20orf194Q5TEA3 1177 aa15.45■□□□□ 0.06
SNHG17-208ENST00000456953 DBF4BQ8NFT6 615 aa15.45■□□□□ 0.06
SNHG17-208ENST00000456953 PPTC7Q8NI37 304 aa15.45■□□□□ 0.06
SNHG17-208ENST00000456953 NSUN6Q8TEA1 469 aaKnown RBP15.45■□□□□ 0.06
SNHG17-208ENST00000456953 ANKS1AQ92625 1134 aa15.45■□□□□ 0.06
SNHG17-208ENST00000456953 IWS1Q96ST2 819 aa15.45■□□□□ 0.06
SNHG17-208ENST00000456953 YME1L1Q96TA2 773 aa15.45■□□□□ 0.06
SNHG17-208ENST00000456953 ALG1Q9BT22 464 aa15.45■□□□□ 0.06
SNHG17-208ENST00000456953 CLDND1Q9NY35 253 aa15.45■□□□□ 0.06
SNHG17-208ENST00000456953 ZDBF2Q9HCK1 2354 aa15.44■□□□□ 0.06
SNHG17-208ENST00000456953 MYO7AQ13402 2215 aa15.44■□□□□ 0.06
SNHG17-208ENST00000456953 RSPH10B2B2RC85 870 aa15.44■□□□□ 0.06
SNHG17-208ENST00000456953 FGRP09769 529 aa15.44■□□□□ 0.06
SNHG17-208ENST00000456953 RSPH10BP0C881 870 aa15.44■□□□□ 0.06
SNHG17-208ENST00000456953 ZNF543Q08ER8 600 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms