RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ZFP91Q96JP5 570 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-215ENST00000456545 FAM217BQ9NTX9 383 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-215ENST00000456545 hCG_1984214I3L0E3 225 aa20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 ARVCFO00192 962 aa20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 MEIS2O14770 477 aa20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 TLR3O15455 904 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 KPNA6O60684 536 aa20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 ARIH2O95376 493 aa20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 PDIA3P30101 505 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 ANAPC15P60006 121 aa20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 MDM2Q00987 491 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 GNPTABQ3T906 1256 aa20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 WWC2Q6AWC2 1192 aa20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 CCDC62Q6P9F0 684 aa20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 DHX37Q8IY37 1157 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 ZNF713Q8N859 430 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 LARP6Q9BRS8 491 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 EHMT1Q9H9B1 1298 aa20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 TMEM39AQ9NV64 488 aa20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 RBM27Q9P2N5 1060 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-215ENST00000456545 CPLX1O14810 134 aa20.76■□□□□ 0.91
PDLIM2-215ENST00000456545 STAM2O75886 525 aa20.76■□□□□ 0.91
PDLIM2-215ENST00000456545 CLTBP09497 229 aa20.76■□□□□ 0.91
PDLIM2-215ENST00000456545 MAGEA10P43363 369 aaPredicted RBP20.76■□□□□ 0.91
PDLIM2-215ENST00000456545 FUT2Q10981 343 aa20.76■□□□□ 0.91
PDLIM2-215ENST00000456545 ITGA7Q13683 1181 aa20.76■□□□□ 0.91
PDLIM2-215ENST00000456545 TOB2Q14106 344 aaPredicted RBP20.76■□□□□ 0.91
PDLIM2-215ENST00000456545 HABP4Q5JVS0 413 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-215ENST00000456545 IL31RAQ8NI17 732 aa20.76■□□□□ 0.91
PDLIM2-215ENST00000456545 RTEL1Q9NZ71 1219 aa20.76■□□□□ 0.91
PDLIM2-215ENST00000456545 DDX41Q9UJV9 622 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-215ENST00000456545 KIAA1217Q5T5P2 1943 aa20.76■□□□□ 0.91
PDLIM2-215ENST00000456545 SMCO2A6NFE2 343 aa20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 ADCY7P51828 1080 aa20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 CHMP4BP1P59074 171 aa20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 STK3Q13188 491 aa20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 LAMC2Q13753 1193 aa20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 UBE2SQ16763 222 aa20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 PPP1R18Q6NYC8 613 aa20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 CPLX2Q6PUV4 134 aaKnown RBP20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 ZNF274Q96GC6 653 aaPredicted RBP20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 TOX2Q96NM4 488 aa20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 MTG1Q9BT17 334 aaPredicted RBP20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 SEZ6LQ9BYH1 1024 aa20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 UBE2OQ9C0C9 1292 aaKnown RBP20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 GLT8D2Q9H1C3 349 aa20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 BARHL2Q9NY43 387 aa20.75■□□□□ 0.91
PDLIM2-215ENST00000456545 A6NJR5 290 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 PRPF3O43395 683 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 TGFB3P10600 412 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 SCG2P13521 617 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 RAG1P15918 1043 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 EVCP57679 992 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 PSMC6P62333 389 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 XRRA1Q6P2D8 792 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 ANKRD33Q7Z3H0 272 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 NLRX1Q86UT6 975 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 CCDC12Q8WUD4 166 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 AFG1LQ8WV93 481 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 PHKBQ93100 1093 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 GDF15Q99988 308 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 SLC26A6Q9BXS9 759 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 MLXIPQ9HAP2 919 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 NCOA5Q9HCD5 579 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 RIC8AQ9NPQ8 531 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 PDLIM7Q9NR12 457 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 PCDHA6Q9UN73 950 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 PCDHA8Q9Y5H6 950 aa20.74■□□□□ 0.91
PDLIM2-215ENST00000456545 STXBP3O00186 592 aa20.73■□□□□ 0.91
PDLIM2-215ENST00000456545 SORBS3O60504 671 aa20.73■□□□□ 0.91
PDLIM2-215ENST00000456545 CDK7P50613 346 aa20.73■□□□□ 0.91
PDLIM2-215ENST00000456545 PURAQ00577 322 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-215ENST00000456545 ANKRD1Q15327 319 aa20.73■□□□□ 0.91
PDLIM2-215ENST00000456545 PFKFB3Q16875 520 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-215ENST00000456545 PCNX4Q63HM2 1172 aa20.73■□□□□ 0.91
PDLIM2-215ENST00000456545 SH3RF1Q7Z6J0 888 aa20.73■□□□□ 0.91
PDLIM2-215ENST00000456545 TRIM22Q8IYM9 498 aa20.73■□□□□ 0.91
PDLIM2-215ENST00000456545 PPFIA3O75145 1194 aa20.72■□□□□ 0.91
PDLIM2-215ENST00000456545 FOSP01100 380 aaPredicted RBP20.72■□□□□ 0.91
PDLIM2-215ENST00000456545 BMP8BP34820 402 aa20.72■□□□□ 0.91
PDLIM2-215ENST00000456545 MRPS9P82933 396 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-215ENST00000456545 ARHGAP1Q07960 439 aa20.72■□□□□ 0.91
PDLIM2-215ENST00000456545 SSRP1Q08945 709 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-215ENST00000456545 FAAP100Q0VG06 881 aa20.72■□□□□ 0.91
PDLIM2-215ENST00000456545 DGKDQ16760 1214 aa20.72■□□□□ 0.91
PDLIM2-215ENST00000456545 FAM47CQ5HY64 1035 aa20.72■□□□□ 0.91
PDLIM2-215ENST00000456545 RNF26Q9BY78 433 aaPredicted RBP20.72■□□□□ 0.91
PDLIM2-215ENST00000456545 C6orf50Q9HD87 102 aa20.72■□□□□ 0.91
PDLIM2-215ENST00000456545 MYH7BA7E2Y1 1941 aa20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 TRIM43BA6NCK2 446 aa20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 RGS20O76081 388 aa20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 SEC24BO95487 1268 aa20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 GGPS1O95749 300 aa20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 IFNAR1P17181 557 aa20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 TEX2Q8IWB9 1127 aa20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 BADQ92934 168 aa20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 TRIM43Q96BQ3 446 aaPredicted RBP20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 SPATA33Q96N06 139 aa20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 SLKQ9H2G2 1235 aaPredicted RBP20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 PCDH10Q9P2E7 1040 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms