RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SLITRK6Q9H5Y7 841 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 DENND2AQ9ULE3 1009 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 RIPOR2Q9Y4F9 1068 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 PXDNLA1KZ92 1463 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 CNOT1A5YKK6 2376 aaKnown RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 TTC36A6NLP5 189 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 RNF113AO15541 343 aaKnown RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 DDAH1O94760 285 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 FOSBP53539 338 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 ANGPT1Q15389 498 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 RSAD2Q8WXG1 361 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 HPS3Q969F9 1004 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 INTS9Q9NV88 658 aaKnown RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 DLG5Q8TDM6 1919 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 TRAF5O00463 557 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 PPP6R2O75170 966 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 PAMP19021 973 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 HPDP32754 393 aaPredicted RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 RWDD2BP57060 319 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 MDM2Q00987 491 aaPredicted RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 CDR2Q01850 454 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 DNAL1Q4LDG9 190 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 MFSD4BQ5TF39 518 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 OSBPL3Q9H4L5 887 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 C14orf93Q9H972 538 aaKnown RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 C1orf112Q9NSG2 853 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 GOLGA8RI6L899 631 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 STXBP3O00186 592 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 BRD1O95696 1058 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 FERMT3Q86UX7 667 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 WDR75Q8IWA0 830 aaKnown RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 MRPS26Q9BYN8 205 aaKnown RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 MAGEB5Q9BZ81 275 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 MYO5BQ9ULV0 1848 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 WASLO00401 505 aaPredicted RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 SH3BP5O60239 455 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 SPAG7O75391 227 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 ARL1P40616 181 aaPredicted RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 PDIK1LQ8N165 341 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 RILPQ96NA2 401 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 LZTFL1Q9NQ48 299 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 SPTLC3Q9NUV7 552 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 ARMCX3Q9UH62 379 aaPredicted RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 RPL26L1Q9UNX3 145 aaKnown RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 ATP8B3O60423 1300 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 MAP3K15Q6ZN16 1313 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 PPIP5K2O43314 1243 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 KLHL38Q2WGJ6 581 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 CREB3L3Q68CJ9 461 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 TRIM72Q6ZMU5 477 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 DDI1Q8WTU0 396 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 CASZ1Q86V15 1759 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 MCF2P10911 925 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 KLHL30Q0D2K2 578 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 SPARCL1Q14515 664 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 ELMSAN1Q6PJG2 1045 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 ARPP21Q9UBL0 812 aaPredicted RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 RBM8AQ9Y5S9 174 aaKnown RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 TLR3O15455 904 aaKnown RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 CHMP2AO43633 222 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 PARP1P09874 1014 aaKnown RBP5.64□□□□□ -1.51
CSMD3-204ENST00000455883 NUP107P57740 925 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 PALM2Q8IXS6 379 aa5.64□□□□□ -1.51
CSMD3-204ENST00000455883 KRIT1O00522 736 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 KIAA0391O15091 583 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ACADSP16219 412 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ATP2B2Q01814 1243 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 CUL3Q13618 768 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 SPATA1Q5VX52 437 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 SYT10Q6XYQ8 523 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 PPP1R14BQ96C90 147 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 BAIAP2L1Q9UHR4 511 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 COL4A3BPQ9Y5P4 624 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ADGRA3Q8IWK6 1321 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 MED23Q9ULK4 1368 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 GTPBP6O43824 516 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 IKBIPQ70UQ0 350 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 GGNBP2Q9H3C7 697 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 YTHDC2Q9H6S0 1430 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 H2AFYO75367 372 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 INHBAP08476 426 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 CCND1P24385 295 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 PRPSAP1Q14558 356 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 SLC30A9Q6PML9 568 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ENOSF1Q7L5Y1 443 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 NBPF5PQ86XG9 351 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 MFN1Q8IWA4 741 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 SNX25Q9H3E2 840 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ZMYND8Q9ULU4 1186 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 VPS9D1Q9Y2B5 631 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 CACNA1GO43497 2377 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 MAGI2Q86UL8 1455 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 H0Y3Z8 333 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 SGSM2O43147 1006 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 CLASP2O75122 1294 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 S100BP04271 92 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 MTA1Q13330 715 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ELF2Q15723 593 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 GPATCH4Q5T3I0 446 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 PASD1Q8IV76 773 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms