RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
SEMA4D-213ENST00000455551 KRT86O43790 486 aa13.61□□□□□ -0.23
SEMA4D-213ENST00000455551 SEMA3FQ13275 785 aa13.61□□□□□ -0.23
SEMA4D-213ENST00000455551 VWA3BQ502W6 1294 aa13.61□□□□□ -0.23
SEMA4D-213ENST00000455551 TRAPPC11Q7Z392 1133 aa13.61□□□□□ -0.23
SEMA4D-213ENST00000455551 MSANTD4Q8NCY6 345 aa13.61□□□□□ -0.23
SEMA4D-213ENST00000455551 HAS1Q92839 578 aa13.61□□□□□ -0.23
SEMA4D-213ENST00000455551 TANGO6Q9C0B7 1094 aa13.61□□□□□ -0.23
SEMA4D-213ENST00000455551 PSTPIP2Q9H939 334 aa13.61□□□□□ -0.23
SEMA4D-213ENST00000455551 DBNDD1Q9H9R9 158 aa13.61□□□□□ -0.23
SEMA4D-213ENST00000455551 H3BQF6 201 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 PSMD14O00487 310 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 HLA-DOAP06340 250 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 SNAP25P60880 206 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 ORC2Q13416 577 aaPredicted RBP13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 BEND6Q5SZJ8 279 aaPredicted RBP13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 ZSCAN29Q8IWY8 852 aaPredicted RBP13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 RETREG2Q8NC44 543 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 CCDC42Q96M95 316 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 DRC1Q96MC2 740 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 ERGIC2Q96RQ1 377 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 MMS19Q96T76 1030 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 PPP1R2P41236 205 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 SAR1BQ9Y6B6 198 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 ZNF263O14978 683 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 ZBTB5O15062 677 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 ZNF185O15231 689 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 KIAA0825Q8IV33 1275 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 FGFBP2Q9BYJ0 223 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 PDE11AQ9HCR9 933 aa13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
SEMA4D-213ENST00000455551 MYH7BA7E2Y1 1941 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 SPATA31A6Q5VVP1 1343 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 PVALEFA0A1B0GWK0 134 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 E9PMD0 336 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 RBM5P52756 815 aaKnown RBP eCLIP13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 MRPL12P52815 198 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 APOBEC3HQ6NTF7 200 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 NELFCDQ8IXH7 590 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 GUF1Q8N442 669 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 TEKT1Q969V4 418 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 UBXN6Q9BZV1 441 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 KANSL2Q9H9L4 492 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 SWAP70Q9UH65 585 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 RAB21Q9UL25 225 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 FOCADQ5VW36 1801 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 NPHP3-ACAD11A0A0J9YXS1 232 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 EIF3CLB5ME19 914 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 TAL1P17542 331 aaPredicted RBP13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 COASYQ13057 564 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 PDIA5Q14554 519 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 TMEM119Q4V9L6 283 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 RRAGAQ7L523 313 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 EIF3CQ99613 913 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 PCDHA12Q9UN75 941 aa13.59□□□□□ -0.23
SEMA4D-213ENST00000455551 ERLIN1O75477 346 aa13.58□□□□□ -0.23
SEMA4D-213ENST00000455551 STAT3P40763 770 aa13.58□□□□□ -0.23
SEMA4D-213ENST00000455551 SPA17Q15506 151 aa13.58□□□□□ -0.23
SEMA4D-213ENST00000455551 MAN2A1Q16706 1144 aa13.58□□□□□ -0.23
SEMA4D-213ENST00000455551 CAGE1Q8TC20 777 aa13.58□□□□□ -0.23
SEMA4D-213ENST00000455551 DEF6Q9H4E7 631 aa13.58□□□□□ -0.23
SEMA4D-213ENST00000455551 ZHX3Q9H4I2 956 aa13.58□□□□□ -0.23
SEMA4D-213ENST00000455551 DNAJC18Q9H819 358 aa13.58□□□□□ -0.23
SEMA4D-213ENST00000455551 JADE2Q9NQC1 790 aa13.58□□□□□ -0.23
SEMA4D-213ENST00000455551 KIAA1024Q9UPX6 916 aa13.58□□□□□ -0.23
SEMA4D-213ENST00000455551 SIK3Q9Y2K2 1263 aa13.58□□□□□ -0.23
SEMA4D-213ENST00000455551 POTEB3A0JP26 581 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 POTECB2RU33 542 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 CLK2P49760 499 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 QRICH1Q2TAL8 776 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 POTEBQ6S5H4 581 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 LRRC55Q6ZSA7 311 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 CCDC170Q8IYT3 715 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 NEK11Q8NG66 645 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 MLXIPQ9HAP2 919 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 ARHGAP20Q9P2F6 1191 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 LRRC53A6NM62 1247 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 ZMYND10O75800 440 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 EIF4A3P38919 411 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 KIF5AQ12840 1032 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 GPATCH4Q5T3I0 446 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 PPP4R3AQ6IN85 833 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 HINFPQ9BQA5 517 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 PANK4Q9NVE7 773 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 PCDHA1Q9Y5I3 950 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 MYH4Q9Y623 1939 aa13.58□□□□□ -0.24
SEMA4D-213ENST00000455551 KLRG2A4D1S0 409 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 TRAF5O00463 557 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 MAP2K7O14733 419 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 SLC1A4P43007 532 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 CRKP46108 304 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 PPP1R18Q6NYC8 613 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 MYOCDQ8IZQ8 938 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 TSG101Q99816 390 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 IFIH1Q9BYX4 1025 aaKnown RBP13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 N4BP1O75113 896 aaKnown RBP13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 EEF2P13639 858 aaKnown RBP13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 VAV2P52735 878 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 COBLL1Q53SF7 1204 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms