RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 CAPN11Q9UMQ6 739 aa11.83□□□□□ -0.52
GTF3C2-206ENST00000454704 PCDHA6Q9UN73 950 aa11.83□□□□□ -0.52
GTF3C2-206ENST00000454704 PCDHA8Q9Y5H6 950 aa11.83□□□□□ -0.52
GTF3C2-206ENST00000454704 ATAD5Q96QE3 1844 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 CTAGE15A4D2H0 777 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 WNT7AO00755 349 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 IPO7O95373 1038 aaKnown RBP11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 OR52Z1P0C646 297 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 CTAGE8P0CG41 777 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 CCNE1P24864 410 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 KRT9P35527 623 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 PRCPP42785 496 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 PLA2G4AP47712 749 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 FXR1P51114 621 aaKnown RBP eCLIP11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 KARSQ15046 597 aaKnown RBP11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 IL17AQ16552 155 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 MEA1Q16626 185 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 HSP90AA4PQ58FG1 418 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 ZNF569Q5MCW4 686 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 PPP1R18Q6NYC8 613 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 CNNM4Q6P4Q7 775 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 CTAGE6Q86UF2 777 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 CTAGE4Q8IX94 777 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 MB21D1Q8N884 522 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 LRRN4CLQ8ND94 238 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 NEDD1Q8NHV4 660 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 TBC1D22AQ8WUA7 517 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 NAP1L4Q99733 375 aaKnown RBP11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 RAB34Q9BZG1 259 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 PSD3Q9NYI0 1048 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 CALCOCO1Q9P1Z2 691 aa11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 LUC7L2Q9Y383 392 aaKnown RBP11.82□□□□□ -0.52
GTF3C2-206ENST00000454704 hCG_1642624A0A1W2PR95 340 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 ANO9A1A5B4 782 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 KLRC4O43908 158 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 UBXN1Q04323 297 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 CKAP4Q07065 602 aaKnown RBP11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 C16orf86Q6ZW13 317 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 APOBEC3FQ8IUX4 373 aaKnown RBP11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 RASSF8Q8NHQ8 419 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 ZNF507Q8TCN5 953 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 RRP36Q96EU6 259 aaKnown RBP11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 TRIM47Q96LD4 638 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 MTRQ99707 1265 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 DESI2Q9BSY9 194 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 PARD6BQ9BYG5 372 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 TSGA10Q9BZW7 698 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 IL17RBQ9NRM6 502 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 FZD1Q9UP38 647 aa11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 EPN1Q9Y6I3 576 aaPredicted RBP11.81□□□□□ -0.52
GTF3C2-206ENST00000454704 FAM205AQ6ZU69 1335 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 PVALEFA0A1B0GWK0 134 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 GPR25O00155 361 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 MAP2K7O14733 419 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 KRT86O43790 486 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 NDUFA10O95299 355 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 CYP2C19P33261 490 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 CCT6AP40227 531 aaKnown RBP11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 TM4SF4P48230 202 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 ERVK-24P63145 666 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 GTF2IP78347 998 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 ZBED6P86452 979 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 SREBF2Q12772 1141 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 MTF1Q14872 753 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 SEPT2Q15019 361 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 PKN2Q16513 984 aaKnown RBP11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 NAALADL2Q58DX5 795 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 IQCEQ6IPM2 695 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 TTI2Q6NXR4 508 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 HDXQ7Z353 690 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 ARMC9Q7Z3E5 817 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 NEK8Q86SG6 692 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 CABP7Q86V35 215 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 P2RX5Q93086 422 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 CALML4Q96GE6 196 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 TMEM47Q9BQJ4 181 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 EDEM3Q9BZQ6 932 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 VPS16Q9H269 839 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 BLZF1Q9H2G9 400 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 LZTFL1Q9NQ48 299 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 EXOC1Q9NV70 894 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 TAB2Q9NYJ8 693 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 SEC63Q9UGP8 760 aaKnown RBP11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 SUGT1Q9Y2Z0 365 aa11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 BAZ2BQ9UIF8 2168 aaKnown RBP11.8□□□□□ -0.52
GTF3C2-206ENST00000454704 GREB1LQ9C091 1923 aaPredicted RBP11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 GPR75-ASB3A0A0A6YYF3 556 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 EIF3CLB5ME19 914 aaKnown RBP11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 NMT2O60551 498 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 CYP2D6P10635 497 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 RASA1P20936 1047 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 PSMD2Q13200 908 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 TMEM266Q2M3C6 531 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 MAP9Q49MG5 647 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 ASPRV1Q53RT3 343 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 FKBP15Q5T1M5 1219 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 WDR93Q6P2C0 686 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 SMYD4Q8IYR2 804 aaPredicted RBP11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 SLC35F6Q8N357 371 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 CPLX3Q8WVH0 158 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms