RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 GBP6Q6ZN66 633 aa12.36□□□□□ -0.43
DDR1-240ENST00000454612 LARP4BQ92615 738 aaKnown RBP12.36□□□□□ -0.43
DDR1-240ENST00000454612 BPIFA3Q9BQP9 254 aa12.36□□□□□ -0.43
DDR1-240ENST00000454612 PYM1Q9BRP8 204 aaKnown RBP12.36□□□□□ -0.43
DDR1-240ENST00000454612 CEP104O60308 925 aa12.36□□□□□ -0.43
DDR1-240ENST00000454612 KLHL30Q0D2K2 578 aa12.36□□□□□ -0.43
DDR1-240ENST00000454612 PHLDB2Q86SQ0 1253 aa12.36□□□□□ -0.43
DDR1-240ENST00000454612 LUC7LQ9NQ29 371 aaKnown RBP12.36□□□□□ -0.43
DDR1-240ENST00000454612 RGS17Q9UGC6 210 aaPredicted RBP12.36□□□□□ -0.43
DDR1-240ENST00000454612 TULP2O00295 520 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 FGFR1OPO95684 399 aaKnown RBP12.35□□□□□ -0.43
DDR1-240ENST00000454612 BAG6P46379 1132 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 DNM2P50570 870 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 ERVK-24P63145 666 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 PPP2R5AQ15172 486 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 DDX12PQ92771 950 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 IL17RBQ9NRM6 502 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 PANK4Q9NVE7 773 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 PHLPP2Q6ZVD8 1323 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 PRPF6O94906 941 aaKnown RBP12.35□□□□□ -0.43
DDR1-240ENST00000454612 NF2P35240 595 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 MAP9Q49MG5 647 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 SLC27A3Q5K4L6 730 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 WDR78Q5VTH9 848 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 FAM133AQ8N9E0 248 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 RWDD2AQ9UIY3 292 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 RRP15Q9Y3B9 282 aaKnown RBP12.35□□□□□ -0.43
DDR1-240ENST00000454612 STK36Q9NRP7 1315 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 POTEB3A0JP26 581 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 POTECB2RU33 542 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 PLCG2P16885 1265 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
DDR1-240ENST00000454612 SARNPP82979 210 aaKnown RBP12.35□□□□□ -0.43
DDR1-240ENST00000454612 GFPT1Q06210 699 aaPredicted RBP12.35□□□□□ -0.43
DDR1-240ENST00000454612 TMEM132AQ24JP5 1023 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 TRIM65Q6PJ69 517 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 POTEBQ6S5H4 581 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 FEZ2Q9UHY8 353 aaPredicted RBP12.35□□□□□ -0.43
DDR1-240ENST00000454612 SERPINB13Q9UIV8 391 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 CNTNAP4Q9C0A0 1308 aa12.35□□□□□ -0.43
DDR1-240ENST00000454612 A0A1B0GTH6 734 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 FAM13AO94988 1023 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 ADAM9Q13443 819 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 FAM26FQ5R3K3 315 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 MYCT1Q8N699 235 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 GLIS3Q8NEA6 775 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 TBC1D5Q92609 795 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 GOLGA6L10A6NI86 522 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 RAD17O75943 681 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 GRAPQ13588 217 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 KIAA0753Q2KHM9 967 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 SLFN13Q68D06 897 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 MYOCDQ8IZQ8 938 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 GRAPLQ8TC17 118 aaPredicted RBP12.34□□□□□ -0.43
DDR1-240ENST00000454612 FAM212AQ96EL1 285 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 SHTN1A0MZ66 631 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 HARSP12081 509 aaKnown RBP12.34□□□□□ -0.43
DDR1-240ENST00000454612 IFFO1Q0D2I5 559 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 NFRKBQ6P4R8 1299 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 FBXO33Q7Z6M2 555 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 CCDC25Q86WR0 208 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 RABGGTAQ92696 567 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 UBR2Q8IWV8 1755 aa12.34□□□□□ -0.43
DDR1-240ENST00000454612 POTEFA5A3E0 1075 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 CYTH3O43739 400 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 POTEIP0CG38 1075 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 RASA1P20936 1047 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 CYP2C19P33261 490 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 CERKLQ49MI3 558 aaPredicted RBP12.33□□□□□ -0.43
DDR1-240ENST00000454612 C8orf74Q6P047 294 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 POTEGQ6S5H5 508 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 POTEEQ6S8J3 1075 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 CLEC4GQ6UXB4 293 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 CCDC65Q8IXS2 484 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 PNKPQ96T60 521 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 MMS19Q96T76 1030 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 KCNQ5Q9NR82 932 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 PCDHAC2Q9Y5I4 1007 aa12.33□□□□□ -0.43
DDR1-240ENST00000454612 THSD7AQ9UPZ6 1657 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 KRT13P13646 458 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 SEPT2Q15019 361 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 SHROOM1Q2M3G4 852 aaPredicted RBP12.33□□□□□ -0.44
DDR1-240ENST00000454612 RC3H1Q5TC82 1133 aaKnown RBP12.33□□□□□ -0.44
DDR1-240ENST00000454612 IQCEQ6IPM2 695 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 EP400NLQ6ZTU2 488 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 DGKHQ86XP1 1220 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
DDR1-240ENST00000454612 MS4A14Q96JA4 679 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 MED15Q96RN5 788 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 LACRTQ9GZZ8 138 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 HSD3B7Q9H2F3 369 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 TDRD3Q9H7E2 651 aaKnown RBP12.33□□□□□ -0.44
DDR1-240ENST00000454612 MRFAP1Q9Y605 127 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 KCNK3O14649 394 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 LRRN2O75325 713 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 MYCLP12524 364 aaPredicted RBP12.33□□□□□ -0.44
DDR1-240ENST00000454612 IL17AQ16552 155 aa12.33□□□□□ -0.44
DDR1-240ENST00000454612 PPM1EQ8WY54 764 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms