RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 HDAC1Q13547 482 aaPredicted RBP8.26□□□□□ -1.09
CHEK2-220ENST00000454252 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.26□□□□□ -1.09
CHEK2-220ENST00000454252 ZFP91Q96JP5 570 aaPredicted RBP8.26□□□□□ -1.09
CHEK2-220ENST00000454252 UBE2ZQ9H832 354 aaPredicted RBP8.26□□□□□ -1.09
CHEK2-220ENST00000454252 HDAC6Q9UBN7 1215 aa8.26□□□□□ -1.09
CHEK2-220ENST00000454252 ANAPC4Q9UJX5 808 aa8.26□□□□□ -1.09
CHEK2-220ENST00000454252 NEDD4P46934 1319 aa8.26□□□□□ -1.09
CHEK2-220ENST00000454252 TTC41PQ6P2S7 1318 aa8.26□□□□□ -1.09
CHEK2-220ENST00000454252 RAD50Q92878 1312 aa8.26□□□□□ -1.09
CHEK2-220ENST00000454252 SALL3Q9BXA9 1300 aa8.26□□□□□ -1.09
CHEK2-220ENST00000454252 H3BQ06 376 aaPredicted RBP8.25□□□□□ -1.09
CHEK2-220ENST00000454252 GPR37L1O60883 481 aa8.25□□□□□ -1.09
CHEK2-220ENST00000454252 BAIAP3O94812 1187 aa8.25□□□□□ -1.09
CHEK2-220ENST00000454252 CSPG5O95196 566 aa8.25□□□□□ -1.09
CHEK2-220ENST00000454252 GJB5O95377 273 aa8.25□□□□□ -1.09
CHEK2-220ENST00000454252 CXCL10P02778 98 aa8.25□□□□□ -1.09
CHEK2-220ENST00000454252 FGRP09769 529 aa8.25□□□□□ -1.09
CHEK2-220ENST00000454252 EIF2AK2P19525 551 aaKnown RBP8.25□□□□□ -1.09
CHEK2-220ENST00000454252 CDC37Q16543 378 aaPredicted RBP8.25□□□□□ -1.09
CHEK2-220ENST00000454252 TRIM71Q2Q1W2 868 aaKnown RBP8.25□□□□□ -1.09
CHEK2-220ENST00000454252 BRDTQ58F21 947 aaPredicted RBP8.25□□□□□ -1.09
CHEK2-220ENST00000454252 ZNF618Q5T7W0 954 aa8.25□□□□□ -1.09
CHEK2-220ENST00000454252 ALYREFQ86V81 257 aaKnown RBP8.25□□□□□ -1.09
CHEK2-220ENST00000454252 SYTL5Q8TDW5 730 aaPredicted RBP8.25□□□□□ -1.09
CHEK2-220ENST00000454252 AFAP1L1Q8TED9 768 aa8.25□□□□□ -1.09
CHEK2-220ENST00000454252 GTF2IRD1Q9UHL9 959 aa8.25□□□□□ -1.09
CHEK2-220ENST00000454252 SCN5AQ14524 2016 aa8.25□□□□□ -1.09
CHEK2-220ENST00000454252 MYO9BQ13459 2157 aa8.25□□□□□ -1.09
CHEK2-220ENST00000454252 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.24□□□□□ -1.09
CHEK2-220ENST00000454252 PI4K2BG5E9Z4 385 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 NKRFO15226 690 aaKnown RBP eCLIP8.24□□□□□ -1.09
CHEK2-220ENST00000454252 GH1P01241 217 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 SNHG28P0DPA3 235 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 SSTR3P32745 418 aaPredicted RBP8.24□□□□□ -1.09
CHEK2-220ENST00000454252 PSEN2P49810 448 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 ERVK-21P61565 698 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 PTPN11Q06124 597 aaPredicted RBP8.24□□□□□ -1.09
CHEK2-220ENST00000454252 NMIQ13287 307 aaPredicted RBP8.24□□□□□ -1.09
CHEK2-220ENST00000454252 MFSD10Q14728 455 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 LRRFIP1Q32MZ4 808 aaKnown RBP8.24□□□□□ -1.09
CHEK2-220ENST00000454252 PPP4R3BQ5MIZ7 849 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 CNKSR3Q6P9H4 555 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 SKAP1Q86WV1 359 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 FAM178BQ8IXR5 827 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 SMC5Q8IY18 1101 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 GJD3Q8N144 294 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 DNERQ8NFT8 737 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 CAGE1Q8TC20 777 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 GPKOWQ92917 476 aaPredicted RBP eCLIP8.24□□□□□ -1.09
CHEK2-220ENST00000454252 CCDC136Q96JN2 1154 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 UIMC1Q96RL1 719 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 TGS1Q96RS0 853 aaKnown RBP8.24□□□□□ -1.09
CHEK2-220ENST00000454252 RAD9AQ99638 391 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 BCAS3Q9H6U6 928 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 TELO2Q9Y4R8 837 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 MYH4Q9Y623 1939 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 WDR19Q8NEZ3 1342 aa8.24□□□□□ -1.09
CHEK2-220ENST00000454252 COL4A4P53420 1690 aaPredicted RBP8.24□□□□□ -1.09
CHEK2-220ENST00000454252 OPLAHO14841 1288 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 KPNA6O60684 536 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 LGR5O75473 907 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 RGS20O76081 388 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 HSPD1P10809 573 aaKnown RBP8.23□□□□□ -1.09
CHEK2-220ENST00000454252 MKRN4PQ13434 485 aaPredicted RBP8.23□□□□□ -1.09
CHEK2-220ENST00000454252 ALX1Q15699 326 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 KIAA0753Q2KHM9 967 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 QRICH1Q2TAL8 776 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 LEXMQ3ZCV2 418 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 PTCRAQ6ISU1 281 aaPredicted RBP8.23□□□□□ -1.09
CHEK2-220ENST00000454252 SESTD1Q86VW0 696 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 ADGRF4Q8IZF3 695 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 MYOCDQ8IZQ8 938 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 C7orf31Q8N865 590 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 FBXO22Q8NEZ5 403 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 DBF4BQ8NFT6 615 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 IL31RAQ8NI17 732 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 RMDN3Q96TC7 470 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 RWDD1Q9H446 243 aaPredicted RBP8.23□□□□□ -1.09
CHEK2-220ENST00000454252 VAT1LQ9HCJ6 419 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 TCP11L1Q9NUJ3 509 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 DDX41Q9UJV9 622 aaKnown RBP8.23□□□□□ -1.09
CHEK2-220ENST00000454252 MYH7P12883 1935 aa8.23□□□□□ -1.09
CHEK2-220ENST00000454252 C5orf42Q9H799 3197 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 LOC102724159A0A0B4J2E5 919 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 ABHD14A-ACY1A0A1B0GW23 586 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 HAS3O00219 553 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 PPP1R11O60927 126 aaPredicted RBP8.22□□□□□ -1.09
CHEK2-220ENST00000454252 UPP2O95045 317 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 F2P00734 622 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 CTSHP09668 335 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 CASTP20810 708 aaKnown RBP8.22□□□□□ -1.09
CHEK2-220ENST00000454252 HOXA13P31271 388 aaPredicted RBP8.22□□□□□ -1.09
CHEK2-220ENST00000454252 THPOP40225 353 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 SP2Q02086 613 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 RBL2Q08999 1139 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 PWP2Q15269 919 aaKnown RBP8.22□□□□□ -1.09
CHEK2-220ENST00000454252 CLUL1Q15846 466 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 DGKDQ16760 1214 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 HSDL1Q3SXM5 330 aa8.22□□□□□ -1.09
CHEK2-220ENST00000454252 TCEAL5Q5H9L2 206 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms