RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 CASTP20810 708 aaKnown RBP12.33□□□□□ -0.44
DDX39A-203ENST00000454233 CYP2C18P33260 490 aa12.33□□□□□ -0.44
DDX39A-203ENST00000454233 EPHB4P54760 987 aa12.33□□□□□ -0.44
DDX39A-203ENST00000454233 ARHGAP1Q07960 439 aa12.33□□□□□ -0.44
DDX39A-203ENST00000454233 COL9A3Q14050 684 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-203ENST00000454233 NBPF20Q3BBV1 942 aa12.33□□□□□ -0.44
DDX39A-203ENST00000454233 DHX32Q7L7V1 743 aaKnown RBP12.33□□□□□ -0.44
DDX39A-203ENST00000454233 VSIG10LQ86VR7 867 aa12.33□□□□□ -0.44
DDX39A-203ENST00000454233 MICU3Q86XE3 530 aa12.33□□□□□ -0.44
DDX39A-203ENST00000454233 RAB11FIP4Q86YS3 637 aa12.33□□□□□ -0.44
DDX39A-203ENST00000454233 DHX37Q8IY37 1157 aaKnown RBP12.33□□□□□ -0.44
DDX39A-203ENST00000454233 SRBD1Q8N5C6 995 aaKnown RBP12.33□□□□□ -0.44
DDX39A-203ENST00000454233 FANCBQ8NB91 859 aa12.33□□□□□ -0.44
DDX39A-203ENST00000454233 SMARCC2Q8TAQ2 1214 aa12.33□□□□□ -0.44
DDX39A-203ENST00000454233 DDX41Q9UJV9 622 aaKnown RBP12.33□□□□□ -0.44
DDX39A-203ENST00000454233 KIAA1217Q5T5P2 1943 aa12.33□□□□□ -0.44
DDX39A-203ENST00000454233 MMP3P08254 477 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 CSF2RAP15509 400 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 CHMP4BP1P59074 171 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 SMAD3P84022 425 aaKnown RBP12.32□□□□□ -0.44
DDX39A-203ENST00000454233 FGD1P98174 961 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 PTPN11Q06124 597 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-203ENST00000454233 LAMC2Q13753 1193 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 DGKDQ16760 1214 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 FAM109BQ6ICB4 259 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-203ENST00000454233 NFRKBQ6P4R8 1299 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 PSRC1Q6PGN9 363 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-203ENST00000454233 APOA5Q6Q788 366 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 TMTC3Q6ZXV5 915 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 Q7L0L9 218 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 RASEFQ8IZ41 740 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 CMTR1Q8N1G2 835 aaKnown RBP12.32□□□□□ -0.44
DDX39A-203ENST00000454233 CCDC82Q8N4S0 544 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 IL31RAQ8NI17 732 aa12.32□□□□□ -0.44
DDX39A-203ENST00000454233 EMID1Q96A84 441 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-203ENST00000454233 NOC4LQ9BVI4 516 aaKnown RBP12.32□□□□□ -0.44
DDX39A-203ENST00000454233 RBM28Q9NW13 759 aaKnown RBP12.32□□□□□ -0.44
DDX39A-203ENST00000454233 ZBTB43O43298 467 aa12.31□□□□□ -0.44
DDX39A-203ENST00000454233 STAM2O75886 525 aa12.31□□□□□ -0.44
DDX39A-203ENST00000454233 REC8O95072 547 aa12.31□□□□□ -0.44
DDX39A-203ENST00000454233 TGFB3P10600 412 aa12.31□□□□□ -0.44
DDX39A-203ENST00000454233 EXOSC10Q01780 885 aaKnown RBP12.31□□□□□ -0.44
DDX39A-203ENST00000454233 ADCK5Q3MIX3 580 aa12.31□□□□□ -0.44
DDX39A-203ENST00000454233 GNPTABQ3T906 1256 aa12.31□□□□□ -0.44
DDX39A-203ENST00000454233 ZNF697Q5TEC3 545 aa12.31□□□□□ -0.44
DDX39A-203ENST00000454233 PPTC7Q8NI37 304 aa12.31□□□□□ -0.44
DDX39A-203ENST00000454233 TCEANC2Q96MN5 208 aa12.31□□□□□ -0.44
DDX39A-203ENST00000454233 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.31□□□□□ -0.442e-12■■□□□ 11.7
DDX39A-203ENST00000454233 MTIF3Q9H2K0 278 aaKnown RBP12.31□□□□□ -0.44
DDX39A-203ENST00000454233 IL23AQ9NPF7 189 aa12.31□□□□□ -0.44
DDX39A-203ENST00000454233 TRMT13Q9NUP7 481 aaKnown RBP12.31□□□□□ -0.44
DDX39A-203ENST00000454233 MTMR10Q9NXD2 777 aa12.31□□□□□ -0.44
DDX39A-203ENST00000454233 NOD1Q9Y239 953 aa12.31□□□□□ -0.44
DDX39A-203ENST00000454233 SCN10AQ9Y5Y9 1956 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 PIK3CDO00329 1044 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 RGS20O76081 388 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 GGPS1O95749 300 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 ACRP10323 421 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 CYP2C9P11712 490 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 CCL23P55773 120 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 RTN1Q16799 776 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 TMEM240Q5SV17 173 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 CELF3Q5SZQ8 465 aaKnown RBP12.3□□□□□ -0.44
DDX39A-203ENST00000454233 USP17L6PQ6QN14 398 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 ZNF365Q70YC5 407 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 RPUSD2Q8IZ73 545 aaKnown RBP12.3□□□□□ -0.44
DDX39A-203ENST00000454233 KATNAL1Q9BW62 490 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 PSTPIP2Q9H939 334 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 MLXIPQ9HAP2 919 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-203ENST00000454233 FRMPD4Q14CM0 1322 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 UMODL1Q5DID0 1318 aa12.3□□□□□ -0.44
DDX39A-203ENST00000454233 KLF18A0A0U1RQI7 1052 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.29□□□□□ -0.44
DDX39A-203ENST00000454233 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.29□□□□□ -0.44
DDX39A-203ENST00000454233 hCG_1642624A0A1W2PR95 340 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 GOLGA8AA7E2F4 631 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 GOLGA8BA8MQT2 603 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 MEIS2O14770 477 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 FGBP02675 491 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 UBA1P22314 1058 aaKnown RBP12.29□□□□□ -0.44
DDX39A-203ENST00000454233 HSPA4P34932 840 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 XRRA1Q6P2D8 792 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 BLOC1S2Q6QNY1 142 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 C16orf59Q7L2K0 433 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 HEATR3Q7Z4Q2 680 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 RETREG2Q8NC44 543 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 PPP1R13LQ8WUF5 828 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 KCNB2Q92953 911 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 ZFP91Q96JP5 570 aaPredicted RBP12.29□□□□□ -0.44
DDX39A-203ENST00000454233 SPATA33Q96N06 139 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 JAKMIP1Q96N16 626 aaKnown RBP12.29□□□□□ -0.44
DDX39A-203ENST00000454233 BRPF3Q9ULD4 1205 aa12.29□□□□□ -0.44
DDX39A-203ENST00000454233 FIBPO43427 364 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 SORBS3O60504 671 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 PPFIA4O75335 1185 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 PSMA5P28066 241 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 ICAM3P32942 547 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 PSEN2P49810 448 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms