RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 SAFBQ15424 915 aaKnown RBP eCLIP16.69■□□□□ 0.26
NCKIPSD-207ENST00000453349 KRT40Q6A162 431 aa16.69■□□□□ 0.26
NCKIPSD-207ENST00000453349 KCNV1Q6PIU1 500 aa16.69■□□□□ 0.26
NCKIPSD-207ENST00000453349 SEPT14Q6ZU15 432 aa16.69■□□□□ 0.26
NCKIPSD-207ENST00000453349 PDGFCQ9NRA1 345 aa16.69■□□□□ 0.26
NCKIPSD-207ENST00000453349 RTEL1Q9NZ71 1219 aa16.69■□□□□ 0.26
NCKIPSD-207ENST00000453349 RBM47A0AV96 593 aaKnown RBP16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 ADAMTS3O15072 1205 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 MMP1P03956 469 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 HSP90AA1P07900 732 aaKnown RBP16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 RARBP10826 455 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 ZNF76P36508 570 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 ADCYAP1R1P41586 468 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 GJA8P48165 433 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 TTLL4Q14679 1199 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 GNPTABQ3T906 1256 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 KRT25Q7Z3Z0 450 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 NLRX1Q86UT6 975 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 IL31RAQ8NI17 732 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 RASGRP4Q8TDF6 673 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 SCFD2Q8WU76 684 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 INTS4Q96HW7 963 aaKnown RBP16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 WDR11Q9BZH6 1224 aa16.68■□□□□ 0.26
NCKIPSD-207ENST00000453349 CCDC194A0A1B0GVG4 234 aa16.67■□□□□ 0.26
NCKIPSD-207ENST00000453349 M0R2N6 131 aa16.67■□□□□ 0.26
NCKIPSD-207ENST00000453349 DUSP11O75319 330 aaKnown RBP16.67■□□□□ 0.26
NCKIPSD-207ENST00000453349 TXNP10599 105 aaKnown RBP16.67■□□□□ 0.26
NCKIPSD-207ENST00000453349 SREBF1P36956 1147 aa16.67■□□□□ 0.26
NCKIPSD-207ENST00000453349 MRPS9P82933 396 aaKnown RBP16.67■□□□□ 0.26
NCKIPSD-207ENST00000453349 GUCY1B3Q02153 619 aa16.67■□□□□ 0.26
NCKIPSD-207ENST00000453349 ANO1Q5XXA6 986 aa16.67■□□□□ 0.26
NCKIPSD-207ENST00000453349 LHX8Q68G74 356 aa16.67■□□□□ 0.26
NCKIPSD-207ENST00000453349 FBXO18Q8NFZ0 1043 aa16.67■□□□□ 0.26
NCKIPSD-207ENST00000453349 U2AF1L4Q8WU68 220 aaKnown RBP16.67■□□□□ 0.26
NCKIPSD-207ENST00000453349 ZFP91Q96JP5 570 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-207ENST00000453349 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-207ENST00000453349 NKRFO15226 690 aaKnown RBP eCLIP16.66■□□□□ 0.26
NCKIPSD-207ENST00000453349 TGFB3P10600 412 aa16.66■□□□□ 0.26
NCKIPSD-207ENST00000453349 ARHGAP4P98171 946 aa16.66■□□□□ 0.26
NCKIPSD-207ENST00000453349 GNL2Q13823 731 aaKnown RBP16.66■□□□□ 0.26
NCKIPSD-207ENST00000453349 NONOQ15233 471 aaKnown RBP eCLIP16.66■□□□□ 0.26
NCKIPSD-207ENST00000453349 NPY5RQ15761 445 aa16.66■□□□□ 0.26
NCKIPSD-207ENST00000453349 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
NCKIPSD-207ENST00000453349 SPC25Q9HBM1 224 aa16.66■□□□□ 0.26
NCKIPSD-207ENST00000453349 XPNPEP3Q9NQH7 507 aa16.66■□□□□ 0.26
NCKIPSD-207ENST00000453349 Q9Y3F1 56 aa16.66■□□□□ 0.26
NCKIPSD-207ENST00000453349 MRVI1Q9Y6F6 885 aa16.66■□□□□ 0.26
NCKIPSD-207ENST00000453349 BTBD18B2RXH4 712 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 H3BQV1 296 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 MAFGO15525 162 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 CYP3A4P08684 503 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 SMPD1P17405 629 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 USP11P51784 963 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 BECN1Q14457 450 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 DUSP28Q4G0W2 176 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 DIS3L2Q8IYB7 885 aaKnown RBP16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 ARRDC4Q8NCT1 418 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 OXER1Q8TDS5 423 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 TBCKQ8TEA7 893 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 CDHR1Q96JP9 859 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 MXRA8Q9BRK3 442 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 CRISPLD2Q9H0B8 497 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 AP5M1Q9H0R1 490 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 JADE2Q9NQC1 790 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 FOXD4L1Q9NU39 408 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 OGDHLQ9ULD0 1010 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 UBIAD1Q9Y5Z9 338 aa16.65■□□□□ 0.26
NCKIPSD-207ENST00000453349 POTEFA5A3E0 1075 aa16.64■□□□□ 0.25
NCKIPSD-207ENST00000453349 DYNC1LI2O43237 492 aaPredicted RBP16.64■□□□□ 0.25
NCKIPSD-207ENST00000453349 FIBPO43427 364 aa16.64■□□□□ 0.25
NCKIPSD-207ENST00000453349 RGS20O76081 388 aa16.64■□□□□ 0.25
NCKIPSD-207ENST00000453349 MYCNP04198 464 aaPredicted RBP16.64■□□□□ 0.25
NCKIPSD-207ENST00000453349 ICAM3P32942 547 aa16.64■□□□□ 0.25
NCKIPSD-207ENST00000453349 LY6KQ17RY6 165 aa16.64■□□□□ 0.25
NCKIPSD-207ENST00000453349 PIK3AP1Q6ZUJ8 805 aa16.64■□□□□ 0.25
NCKIPSD-207ENST00000453349 GPRASP2Q96D09 838 aa16.64■□□□□ 0.25
NCKIPSD-207ENST00000453349 INPP4AQ96PE3 977 aaPredicted RBP16.64■□□□□ 0.25
NCKIPSD-207ENST00000453349 GNEQ9Y223 722 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-207ENST00000453349 SPATA31C2B4DYI2 1134 aa16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 PGK1P00558 417 aa16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 ITGB5P18084 799 aa16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 EN2P19622 333 aaPredicted RBP16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 PDCP20941 246 aa16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 SOX10P56693 466 aa16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 NR5A1Q13285 461 aa16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 MTMR1Q13613 665 aa16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 CEP55Q53EZ4 464 aa16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 CCDC62Q6P9F0 684 aa16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 NIPA1Q7RTP0 329 aa16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 RNF180Q86T96 592 aa16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 TLK2Q86UE8 772 aa16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 DHX37Q8IY37 1157 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 FOXP1Q9H334 677 aaPredicted RBP16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 DDX41Q9UJV9 622 aaKnown RBP16.63■□□□□ 0.25
NCKIPSD-207ENST00000453349 MCM3APO60318 1980 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 ADCY6O43306 1168 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 ARIH2O95376 493 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 GH1P01241 217 aa16.62■□□□□ 0.25
NCKIPSD-207ENST00000453349 C6orf222P0C671 652 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms