RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 FAM153CQ494X1 144 aa12.09□□□□□ -0.47
CHL1-208ENST00000453040 TCP11X2Q5H9J9 407 aa12.09□□□□□ -0.47
CHL1-208ENST00000453040 CAVIN3Q969G5 261 aa12.09□□□□□ -0.47
CHL1-208ENST00000453040 TUBGCP4Q9UGJ1 667 aa12.09□□□□□ -0.47
CHL1-208ENST00000453040 FAM153AQ9UHL3 310 aa12.09□□□□□ -0.47
CHL1-208ENST00000453040 TTC26A0AVF1 554 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 TRAPPC3O43617 180 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 CSF1RP07333 972 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 FKBP4Q02790 459 aaKnown RBP eCLIP12.08□□□□□ -0.48
CHL1-208ENST00000453040 PLS1Q14651 629 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 FNBP4Q8N3X1 1017 aaPredicted RBP12.08□□□□□ -0.48
CHL1-208ENST00000453040 C4orf32Q8N8J7 132 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 GSDMAQ96QA5 445 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 ADAMTS2O95450 1211 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 RNF220Q5VTB9 566 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 C1orf131Q8NDD1 294 aaKnown RBP12.08□□□□□ -0.48
CHL1-208ENST00000453040 RUBCNQ92622 972 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 MYL10Q9BUA6 226 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 ZSWIM5Q9P217 1185 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 NKX1-2Q9UD57 310 aaPredicted RBP12.08□□□□□ -0.48
CHL1-208ENST00000453040 TPD52L2O43399 206 aaKnown RBP12.08□□□□□ -0.48
CHL1-208ENST00000453040 GCP02774 474 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 TSNAXIP1Q2TAA8 658 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 CYP26C1Q6V0L0 522 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 SDR16C5Q8N3Y7 309 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 GBP3Q9H0R5 595 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 CAPN11Q9UMQ6 739 aa12.08□□□□□ -0.48
CHL1-208ENST00000453040 SOS2Q07890 1332 aaPredicted RBP12.07□□□□□ -0.48
CHL1-208ENST00000453040 COBLO75128 1261 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 ALDH2P05091 517 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 ZFYP08048 801 aaPredicted RBP12.07□□□□□ -0.48
CHL1-208ENST00000453040 GM2AP17900 193 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 SDCCAG8Q86SQ7 713 aaPredicted RBP12.07□□□□□ -0.48
CHL1-208ENST00000453040 UTP4Q969X6 686 aaKnown RBP12.07□□□□□ -0.48
CHL1-208ENST00000453040 PHF20Q9BVI0 1012 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 KCNJ14Q9UNX9 436 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 PDS5AQ29RF7 1337 aaKnown RBP12.07□□□□□ -0.48
CHL1-208ENST00000453040 GOLGA6BA6NDN3 693 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 ECHS1P30084 290 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 SGSM1Q2NKQ1 1148 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 TOM1L2Q6ZVM7 507 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 CCDC47Q96A33 483 aaKnown RBP12.07□□□□□ -0.48
CHL1-208ENST00000453040 SLF1Q9BQI6 1058 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 RWDD2AQ9UIY3 292 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 LRRC42Q9Y546 428 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 EPN1Q9Y6I3 576 aaPredicted RBP12.07□□□□□ -0.48
CHL1-208ENST00000453040 BAZ2AQ9UIF9 1905 aaKnown RBP12.07□□□□□ -0.48
CHL1-208ENST00000453040 MYBP10242 640 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 EZRP15311 586 aaKnown RBP12.07□□□□□ -0.48
CHL1-208ENST00000453040 SLC8A1P32418 973 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 KCTD16Q68DU8 428 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 CRACR2BQ8N4Y2 399 aaPredicted RBP12.07□□□□□ -0.48
CHL1-208ENST00000453040 CCDC97Q96F63 343 aaPredicted RBP12.07□□□□□ -0.48
CHL1-208ENST00000453040 CORO1BQ9BR76 489 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
CHL1-208ENST00000453040 SALL4Q9UJQ4 1053 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 RIPOR2Q9Y4F9 1068 aa12.07□□□□□ -0.48
CHL1-208ENST00000453040 BACH1O14867 736 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 KLRC4O43908 158 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 DIAPH2O60879 1101 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 POLD1P28340 1107 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 MDH1P40925 334 aaKnown RBP12.06□□□□□ -0.48
CHL1-208ENST00000453040 COPB1P53618 953 aaKnown RBP12.06□□□□□ -0.48
CHL1-208ENST00000453040 PHEXP78562 749 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 DIS3L2Q8IYB7 885 aaKnown RBP12.06□□□□□ -0.48
CHL1-208ENST00000453040 KCNH5Q8NCM2 988 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 TMEM87BQ96K49 555 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 PLA2G12BQ9BX93 195 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 CENPHQ9H3R5 247 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 ACTR5Q9H9F9 607 aaPredicted RBP12.06□□□□□ -0.48
CHL1-208ENST00000453040 PIH1D3Q9NQM4 214 aaKnown RBP12.06□□□□□ -0.48
CHL1-208ENST00000453040 DCDC2CA8MYV0 355 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 PRLRP16471 622 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 KCNJ2P63252 427 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 MRPS25P82663 173 aaKnown RBP12.06□□□□□ -0.48
CHL1-208ENST00000453040 ANKRD20A2Q5SQ80 823 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 MFSD4BQ5TF39 518 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 ANKRD20A1Q5TYW2 823 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 ANKRD20A3Q5VUR7 823 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 HAUS3Q68CZ6 603 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 SMYD1Q8NB12 490 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 SPIRE2Q8WWL2 714 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 FAM184BQ9ULE4 1060 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 A0A1W2PQC6 194 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 SHTN1A0MZ66 631 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 GFPT2O94808 682 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 PAEPP09466 180 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 HNRNPH3P31942 346 aaKnown RBP12.06□□□□□ -0.48
CHL1-208ENST00000453040 SEC23AQ15436 765 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 NAALADL2Q58DX5 795 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 RILPL1Q5EBL4 403 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 MIGA2Q7L4E1 593 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 CD302Q8IX05 232 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 CPLX3Q8WVH0 158 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 STRBPQ96SI9 672 aaKnown RBP12.06□□□□□ -0.48
CHL1-208ENST00000453040 MTA3Q9BTC8 594 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 ISCA1Q9BUE6 129 aa12.06□□□□□ -0.48
CHL1-208ENST00000453040 OXCT2Q9BYC2 517 aaPredicted RBP12.06□□□□□ -0.48
CHL1-208ENST00000453040 ANO9A1A5B4 782 aa12.05□□□□□ -0.48
CHL1-208ENST00000453040 B4E1Z4 1266 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms