RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 NSUN6Q8TEA1 469 aaKnown RBP13.66□□□□□ -0.22
HERC3-207ENST00000452979 HLA-CQ95604 372 aa13.66□□□□□ -0.22
HERC3-207ENST00000452979 EMID1Q96A84 441 aaPredicted RBP13.66□□□□□ -0.22
HERC3-207ENST00000452979 RNF41Q9H4P4 317 aaPredicted RBP13.66□□□□□ -0.22
HERC3-207ENST00000452979 ZBTB47Q9UFB7 747 aaPredicted RBP13.66□□□□□ -0.22
HERC3-207ENST00000452979 DDX41Q9UJV9 622 aaKnown RBP13.66□□□□□ -0.22
HERC3-207ENST00000452979 ARIH1Q9Y4X5 557 aaPredicted RBP13.66□□□□□ -0.22
HERC3-207ENST00000452979 MYH7BA7E2Y1 1941 aa13.66□□□□□ -0.22
HERC3-207ENST00000452979 MYH6P13533 1939 aa13.66□□□□□ -0.22
HERC3-207ENST00000452979 CCDC171Q6TFL3 1326 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 LAMA4Q16363 1823 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 NEFLP07196 543 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 HDAC1Q13547 482 aaPredicted RBP13.65□□□□□ -0.22
HERC3-207ENST00000452979 STXBP2Q15833 593 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 CCDC178Q5BJE1 867 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 CNKSR3Q6P9H4 555 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 SEPT14Q6ZU15 432 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 LRRC8DQ7L1W4 858 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 SPRED2Q7Z698 418 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 MCF2L2Q86YR7 1114 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 DHX38Q92620 1227 aaKnown RBP13.65□□□□□ -0.22
HERC3-207ENST00000452979 ESR2Q92731 530 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 FAM122AQ96E09 287 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 UBA5Q9GZZ9 404 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 CPVLQ9H3G5 476 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 COL20A1Q9P218 1284 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 GTF2IRD1Q9UHL9 959 aa13.65□□□□□ -0.22
HERC3-207ENST00000452979 ABHD14A-ACY1A0A1B0GW23 586 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 LCHNA4D1U4 455 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 HAS3O00219 553 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 ZNF213O14771 459 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 NBNO60934 754 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 EIF3JO75822 258 aaKnown RBP13.64□□□□□ -0.23
HERC3-207ENST00000452979 GJB5O95377 273 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 CKBP12277 381 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 CHMP4BP1P59074 171 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 CDC37Q16543 378 aaPredicted RBP13.64□□□□□ -0.23
HERC3-207ENST00000452979 DGKDQ16760 1214 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 ADGRF4Q8IZF3 695 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 PNMA1Q8ND90 353 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 RMDN3Q96TC7 470 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 RAD9AQ99638 391 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 ZKSCAN3Q9BRR0 538 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 EPHX3Q9H6B9 360 aa13.64□□□□□ -0.23
HERC3-207ENST00000452979 SIP14410 1827 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 EFCAB14O75071 495 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 MFAP1P55081 439 aaKnown RBP13.63□□□□□ -0.23
HERC3-207ENST00000452979 ERVK-21P61565 698 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 DEFB103AP81534 67 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 GHRHRQ02643 423 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 PTK7Q13308 1070 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 LAMC2Q13753 1193 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 TCTN1Q2MV58 587 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 TRIM71Q2Q1W2 868 aaKnown RBP13.63□□□□□ -0.23
HERC3-207ENST00000452979 ASPRV1Q53RT3 343 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 TRAF7Q6Q0C0 670 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 TMCO2Q7Z6W1 182 aaPredicted RBP13.63□□□□□ -0.23
HERC3-207ENST00000452979 C7orf31Q8N865 590 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 LRFN3Q9BTN0 628 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 ZBED2Q9BTP6 218 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 KATNAL1Q9BW62 490 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 SUGCTQ9HAC7 445 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 HDAC6Q9UBN7 1215 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 MRPL11Q9Y3B7 192 aaKnown RBP13.63□□□□□ -0.23
HERC3-207ENST00000452979 NEDD4P46934 1319 aa13.63□□□□□ -0.23
HERC3-207ENST00000452979 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.62□□□□□ -0.23
HERC3-207ENST00000452979 PPFIA4O75335 1185 aa13.62□□□□□ -0.23
HERC3-207ENST00000452979 F2P00734 622 aa13.62□□□□□ -0.23
HERC3-207ENST00000452979 HOXD8P13378 290 aaPredicted RBP13.62□□□□□ -0.23
HERC3-207ENST00000452979 SDSP20132 328 aa13.62□□□□□ -0.23
HERC3-207ENST00000452979 PSEN2P49810 448 aa13.62□□□□□ -0.23
HERC3-207ENST00000452979 IKBKEQ14164 716 aa13.62□□□□□ -0.23
HERC3-207ENST00000452979 QRICH1Q2TAL8 776 aa13.62□□□□□ -0.23
HERC3-207ENST00000452979 CHST3Q7LGC8 479 aa13.62□□□□□ -0.23
HERC3-207ENST00000452979 IQCA1Q86XH1 822 aa13.62□□□□□ -0.23
HERC3-207ENST00000452979 PPTC7Q8NI37 304 aa13.62□□□□□ -0.23
HERC3-207ENST00000452979 JMJD4Q9H9V9 463 aa13.62□□□□□ -0.23
HERC3-207ENST00000452979 PXMP2Q9NR77 195 aa13.62□□□□□ -0.23
HERC3-207ENST00000452979 MAP3K20Q9NYL2 800 aaKnown RBP13.62□□□□□ -0.23
HERC3-207ENST00000452979 TRIM6-TRIM34B2RNG4 842 aa13.61□□□□□ -0.23
HERC3-207ENST00000452979 KDM4AO75164 1064 aa13.61□□□□□ -0.23
HERC3-207ENST00000452979 NR3C2P08235 984 aa13.61□□□□□ -0.23
HERC3-207ENST00000452979 HSD17B4P51659 736 aa13.61□□□□□ -0.23
HERC3-207ENST00000452979 MFSD10Q14728 455 aa13.61□□□□□ -0.23
HERC3-207ENST00000452979 KIAA0753Q2KHM9 967 aa13.61□□□□□ -0.23
HERC3-207ENST00000452979 ARHGEF16Q5VV41 709 aa13.61□□□□□ -0.23
HERC3-207ENST00000452979 MYSM1Q5VVJ2 828 aa13.61□□□□□ -0.23
HERC3-207ENST00000452979 FBXO11Q86XK2 927 aa13.61□□□□□ -0.23
HERC3-207ENST00000452979 ENAHQ8N8S7 591 aaPredicted RBP13.61□□□□□ -0.23
HERC3-207ENST00000452979 TGS1Q96RS0 853 aaKnown RBP13.61□□□□□ -0.23
HERC3-207ENST00000452979 ZSCAN10Q96SZ4 725 aaPredicted RBP13.61□□□□□ -0.23
HERC3-207ENST00000452979 KAT14Q9H8E8 782 aa13.61□□□□□ -0.23
HERC3-207ENST00000452979 ZSWIM5Q9P217 1185 aa13.61□□□□□ -0.23
HERC3-207ENST00000452979 LINC01553A4QN01 128 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 OPLAHO14841 1288 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 GPR37L1O60883 481 aa13.6□□□□□ -0.23
HERC3-207ENST00000452979 PARP1P09874 1014 aaKnown RBP13.6□□□□□ -0.23
HERC3-207ENST00000452979 EIF2AK2P19525 551 aaKnown RBP13.6□□□□□ -0.23
HERC3-207ENST00000452979 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
HERC3-207ENST00000452979 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms