RNA–Protein interactions for RNA: ENST00000451744.1

LINC00458-203, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best)

Gene LINC00458, Length 1,020 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-203ENST00000451744 KIRREL1Q96J84 757 aa7.84□□□□□ -1.15
LINC00458-203ENST00000451744 FAM161BQ96MY7 647 aa7.84□□□□□ -1.15
LINC00458-203ENST00000451744 TOX2Q96NM4 488 aa7.84□□□□□ -1.15
LINC00458-203ENST00000451744 TGIF2Q9GZN2 237 aa7.84□□□□□ -1.15
LINC00458-203ENST00000451744 PNNQ9H307 717 aaKnown RBP7.84□□□□□ -1.15
LINC00458-203ENST00000451744 ABCC12Q96J65 1359 aa7.84□□□□□ -1.16
LINC00458-203ENST00000451744 DDX60Q8IY21 1712 aaKnown RBP7.83□□□□□ -1.16
LINC00458-203ENST00000451744 CACNA1FO60840 1977 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 A0A0G2JLW4 131 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 PRAMEF27A3QJZ7 478 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 FAM155AB1AL88 458 aaPredicted RBP7.83□□□□□ -1.16
LINC00458-203ENST00000451744 ELL2O00472 640 aaPredicted RBP7.83□□□□□ -1.16
LINC00458-203ENST00000451744 TCERG1O14776 1098 aaKnown RBP7.83□□□□□ -1.16
LINC00458-203ENST00000451744 LRIG2O94898 1065 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 HSP90B1P14625 803 aaKnown RBP7.83□□□□□ -1.16
LINC00458-203ENST00000451744 DPEP1P16444 411 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 CFPP27918 469 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 ZNF76P36508 570 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 IL6STP40189 918 aaPredicted RBP7.83□□□□□ -1.16
LINC00458-203ENST00000451744 LMOD3Q0VAK6 560 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 LRRC14Q15048 493 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 SYDE1Q6ZW31 735 aaPredicted RBP7.83□□□□□ -1.16
LINC00458-203ENST00000451744 TSPYL6Q8N831 410 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 ZNF507Q8TCN5 953 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 CRELD1Q96HD1 420 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 PPP1R16BQ96T49 567 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 SEMA3GQ9NS98 782 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 C19orf73Q9NVV2 129 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 PPM1HQ9ULR3 514 aa7.83□□□□□ -1.16
LINC00458-203ENST00000451744 TPX2Q9ULW0 747 aaKnown RBP7.83□□□□□ -1.16
LINC00458-203ENST00000451744 INPP5AQ14642 412 aa7.82□□□□□ -1.16
LINC00458-203ENST00000451744 TMEM67Q5HYA8 995 aa7.82□□□□□ -1.16
LINC00458-203ENST00000451744 LRFN4Q6PJG9 635 aa7.82□□□□□ -1.16
LINC00458-203ENST00000451744 NLGN1Q8N2Q7 840 aa7.82□□□□□ -1.16
LINC00458-203ENST00000451744 MFSD4AQ8N468 514 aa7.82□□□□□ -1.16
LINC00458-203ENST00000451744 C8orf58Q8NAV2 365 aa7.82□□□□□ -1.16
LINC00458-203ENST00000451744 SETDB2Q96T68 719 aa7.82□□□□□ -1.16
LINC00458-203ENST00000451744 OSBPL7Q9BZF2 842 aa7.82□□□□□ -1.16
LINC00458-203ENST00000451744 CCSER2Q9H7U1 834 aa7.82□□□□□ -1.16
LINC00458-203ENST00000451744 FBRSQ9HAH7 460 aa7.82□□□□□ -1.16
LINC00458-203ENST00000451744 CHPF2Q9P2E5 772 aa7.82□□□□□ -1.16
LINC00458-203ENST00000451744 SPEF2Q9C093 1822 aa7.82□□□□□ -1.16
LINC00458-203ENST00000451744 UBN2Q6ZU65 1347 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 FER1L6Q2WGJ9 1857 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 H3BS24 57 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 SERPINB2P05120 415 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 CELA3AP09093 270 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 KCNA3P22001 575 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 GPTP24298 496 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 PRR5LQ6MZQ0 368 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 C1QL4Q86Z23 238 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 LRRC56Q8IYG6 542 aaPredicted RBP7.81□□□□□ -1.16
LINC00458-203ENST00000451744 SLC43A3Q8NBI5 491 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 MIPEPQ99797 713 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 TINF2Q9BSI4 451 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 TEX13AQ9BXU3 409 aaPredicted RBP7.81□□□□□ -1.16
LINC00458-203ENST00000451744 SRCIN1Q9C0H9 1055 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 IFT57Q9NWB7 429 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 CD2APQ9Y5K6 639 aa7.81□□□□□ -1.16
LINC00458-203ENST00000451744 FANCIQ9NVI1 1328 aa7.8□□□□□ -1.16
LINC00458-203ENST00000451744 A0A087WZG4 1122 aa7.8□□□□□ -1.16
LINC00458-203ENST00000451744 KRTAP9-7A8MTY7 169 aa7.8□□□□□ -1.16
LINC00458-203ENST00000451744 ZNF865P0CJ78 1059 aaPredicted RBP7.8□□□□□ -1.16
LINC00458-203ENST00000451744 PTPN11Q06124 597 aaPredicted RBP7.8□□□□□ -1.16
LINC00458-203ENST00000451744 AIMP1Q12904 312 aaKnown RBP7.8□□□□□ -1.16
LINC00458-203ENST00000451744 SLBPQ14493 270 aaKnown RBP eCLIP7.8□□□□□ -1.16
LINC00458-203ENST00000451744 GPR162Q16538 588 aa7.8□□□□□ -1.16
LINC00458-203ENST00000451744 SFRP5Q5T4F7 317 aa7.8□□□□□ -1.16
LINC00458-203ENST00000451744 C9orf131Q5VYM1 1079 aa7.8□□□□□ -1.16
LINC00458-203ENST00000451744 PCNX4Q63HM2 1172 aa7.8□□□□□ -1.16
LINC00458-203ENST00000451744 LCNL1Q6ZST4 164 aa7.8□□□□□ -1.16
LINC00458-203ENST00000451744 FAM177A1Q8N128 213 aaPredicted RBP7.8□□□□□ -1.16
LINC00458-203ENST00000451744 XAGE3Q8WTP9 111 aa7.8□□□□□ -1.16
LINC00458-203ENST00000451744 CYP8B1Q9UNU6 501 aa7.8□□□□□ -1.16
LINC00458-203ENST00000451744 TIAM2Q8IVF5 1701 aa7.8□□□□□ -1.16
LINC00458-203ENST00000451744 DICER1Q9UPY3 1922 aaKnown RBP7.8□□□□□ -1.16
LINC00458-203ENST00000451744 MAP3K15Q6ZN16 1313 aa7.79□□□□□ -1.16
LINC00458-203ENST00000451744 GDNFP39905 211 aa7.79□□□□□ -1.16
LINC00458-203ENST00000451744 GNL2Q13823 731 aaKnown RBP7.79□□□□□ -1.16
LINC00458-203ENST00000451744 NKG7Q16617 165 aa7.79□□□□□ -1.16
LINC00458-203ENST00000451744 DIEXFQ68CQ4 756 aaKnown RBP7.79□□□□□ -1.16
LINC00458-203ENST00000451744 SCARA3Q6AZY7 606 aa7.79□□□□□ -1.16
LINC00458-203ENST00000451744 C22orf34Q6ZV56 151 aa7.79□□□□□ -1.16
LINC00458-203ENST00000451744 ZSCAN18Q8TBC5 510 aaPredicted RBP7.79□□□□□ -1.16
LINC00458-203ENST00000451744 PLPPR2Q96GM1 343 aa7.79□□□□□ -1.16
LINC00458-203ENST00000451744 DIRC2Q96SL1 478 aa7.79□□□□□ -1.16
LINC00458-203ENST00000451744 PHAXQ9H814 394 aaKnown RBP7.79□□□□□ -1.16
LINC00458-203ENST00000451744 NIP7Q9Y221 180 aaKnown RBP eCLIP7.79□□□□□ -1.16
LINC00458-203ENST00000451744 AK5Q9Y6K8 562 aa7.79□□□□□ -1.16
LINC00458-203ENST00000451744 MYH3P11055 1940 aa7.79□□□□□ -1.16
LINC00458-203ENST00000451744 ZNF521Q96K83 1311 aa7.78□□□□□ -1.16
LINC00458-203ENST00000451744 ATP10DQ9P241 1426 aa7.78□□□□□ -1.16
LINC00458-203ENST00000451744 RBAK-RBAKDNI3L0D1 243 aa7.78□□□□□ -1.16
LINC00458-203ENST00000451744 C1QTNF9P0C862 333 aa7.78□□□□□ -1.16
LINC00458-203ENST00000451744 PRELPP51888 382 aa7.78□□□□□ -1.16
LINC00458-203ENST00000451744 OLFM4Q6UX06 510 aa7.78□□□□□ -1.16
LINC00458-203ENST00000451744 COPS6Q7L5N1 327 aa7.78□□□□□ -1.16
LINC00458-203ENST00000451744 G2E3Q7L622 706 aa7.78□□□□□ -1.16
LINC00458-203ENST00000451744 SYNE4Q8N205 404 aa7.78□□□□□ -1.16
LINC00458-203ENST00000451744 RIN3Q8TB24 985 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms