RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 CMTR1Q8N1G2 835 aaKnown RBP19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 CTCFLQ8NI51 663 aaPredicted RBP19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 ZFP91Q96JP5 570 aaPredicted RBP19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 IWS1Q96ST2 819 aa19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 TRPV6Q9H1D0 765 aa19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 ALDH8A1Q9H2A2 487 aaPredicted RBP19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 POLR3EQ9NVU0 708 aa19.67■□□□□ 0.74
PRPF40A-204ENST00000450303 DDAH1O94760 285 aa19.66■□□□□ 0.74
PRPF40A-204ENST00000450303 CPA1P15085 419 aa19.66■□□□□ 0.74
PRPF40A-204ENST00000450303 PURAQ00577 322 aaKnown RBP19.66■□□□□ 0.74
PRPF40A-204ENST00000450303 CCDC62Q6P9F0 684 aa19.66■□□□□ 0.74
PRPF40A-204ENST00000450303 Q6ZUG5 572 aa19.66■□□□□ 0.74
PRPF40A-204ENST00000450303 FCHSD1Q86WN1 690 aa19.66■□□□□ 0.74
PRPF40A-204ENST00000450303 DEFB123Q8N688 67 aa19.66■□□□□ 0.74
PRPF40A-204ENST00000450303 LAMA3Q16787 3333 aa19.66■□□□□ 0.74
PRPF40A-204ENST00000450303 MYH7BA7E2Y1 1941 aa19.66■□□□□ 0.74
PRPF40A-204ENST00000450303 B4GALT4O60513 344 aa19.65■□□□□ 0.74
PRPF40A-204ENST00000450303 PLEKHA8P1O95397 391 aa19.65■□□□□ 0.74
PRPF40A-204ENST00000450303 CYP2C18P33260 490 aa19.65■□□□□ 0.74
PRPF40A-204ENST00000450303 MCM2P49736 904 aa19.65■□□□□ 0.74
PRPF40A-204ENST00000450303 CHMP4BP1P59074 171 aa19.65■□□□□ 0.74
PRPF40A-204ENST00000450303 GHRHRQ02643 423 aa19.65■□□□□ 0.74
PRPF40A-204ENST00000450303 BRDTQ58F21 947 aaPredicted RBP19.65■□□□□ 0.74
PRPF40A-204ENST00000450303 MFSD5Q6N075 450 aa19.65■□□□□ 0.74
PRPF40A-204ENST00000450303 FBXL16Q8N461 479 aa19.65■□□□□ 0.74
PRPF40A-204ENST00000450303 TCEANC2Q96MN5 208 aa19.65■□□□□ 0.74
PRPF40A-204ENST00000450303 MAP3K14Q99558 947 aa19.65■□□□□ 0.74
PRPF40A-204ENST00000450303 MTG1Q9BT17 334 aaPredicted RBP19.65■□□□□ 0.74
PRPF40A-204ENST00000450303 A6NJR5 290 aa19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 GCOM1H8Y6P7 765 aaPredicted RBP19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 EIF3JO75822 258 aaKnown RBP19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 POLR2MP0CAP2 368 aa19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 KIF5BP33176 963 aa19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 LIFRP42702 1097 aa19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 TRAF1Q13077 416 aa19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 GPR153Q6NV75 609 aa19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 SYNE3Q6ZMZ3 975 aa19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 SRBD1Q8N5C6 995 aaKnown RBP19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 IL31RAQ8NI17 732 aa19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 AFG1LQ8WV93 481 aa19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 RRP36Q96EU6 259 aaKnown RBP19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 PDCD2LQ9BRP1 358 aa19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 UMODL1Q5DID0 1318 aa19.64■□□□□ 0.73
PRPF40A-204ENST00000450303 SORBS3O60504 671 aa19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 GH1P01241 217 aa19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 ACRP10323 421 aa19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 CSF2RAP15509 400 aa19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 ARHGAP1Q07960 439 aa19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 NBPF20Q3BBV1 942 aa19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 FAM47CQ5HY64 1035 aa19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 CCDC82Q8N4S0 544 aa19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 RNPC3Q96LT9 517 aaKnown RBP19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 SPZ1Q9BXG8 430 aa19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 TRMT13Q9NUP7 481 aaKnown RBP19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 MAP3K20Q9NYL2 800 aaKnown RBP19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 DDX41Q9UJV9 622 aaKnown RBP19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 SLC12A7Q9Y666 1083 aa19.63■□□□□ 0.73
PRPF40A-204ENST00000450303 hCG_1642624A0A1W2PR95 340 aa19.62■□□□□ 0.73
PRPF40A-204ENST00000450303 AK2P54819 239 aa19.62■□□□□ 0.73
PRPF40A-204ENST00000450303 CCL23P55773 120 aa19.62■□□□□ 0.73
PRPF40A-204ENST00000450303 PGM5Q15124 567 aa19.62■□□□□ 0.73
PRPF40A-204ENST00000450303 C16orf59Q7L2K0 433 aa19.62■□□□□ 0.73
PRPF40A-204ENST00000450303 TMEM199Q8N511 208 aa19.62■□□□□ 0.73
PRPF40A-204ENST00000450303 SAMD3Q8N6K7 520 aa19.62■□□□□ 0.73
PRPF40A-204ENST00000450303 FAM161BQ96MY7 647 aa19.62■□□□□ 0.73
PRPF40A-204ENST00000450303 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.62■□□□□ 0.733e-14■□□□□ 11.2
PRPF40A-204ENST00000450303 AGXT2Q9BYV1 514 aa19.62■□□□□ 0.73
PRPF40A-204ENST00000450303 HIPK3Q9H422 1215 aa19.62■□□□□ 0.73
PRPF40A-204ENST00000450303 MRVI1Q9Y6F6 885 aa19.62■□□□□ 0.73
PRPF40A-204ENST00000450303 SCN10AQ9Y5Y9 1956 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 RGS20O76081 388 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 MMP3P08254 477 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 CALM1P0DP23 149 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 CALM2P0DP24 149 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 CALM3P0DP25 149 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 CYP2C9P11712 490 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 GNAQP50148 359 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 PPIGQ13427 754 aaKnown RBP eCLIP19.61■□□□□ 0.731e-9■■□□□ 11.8
PRPF40A-204ENST00000450303 VSIG10LQ86VR7 867 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 BRF1Q92994 677 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 LZTS2Q9BRK4 669 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 SEZ6LQ9BYH1 1024 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 MTMR10Q9NXD2 777 aa19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 SEC63Q9UGP8 760 aaKnown RBP19.61■□□□□ 0.73
PRPF40A-204ENST00000450303 KPNA6O60684 536 aa19.6■□□□□ 0.73
PRPF40A-204ENST00000450303 SMARCA1P28370 1054 aa19.6■□□□□ 0.73
PRPF40A-204ENST00000450303 SGMS1Q86VZ5 419 aa19.6■□□□□ 0.73
PRPF40A-204ENST00000450303 MICU3Q86XE3 530 aa19.6■□□□□ 0.73
PRPF40A-204ENST00000450303 FANCBQ8NB91 859 aa19.6■□□□□ 0.73
PRPF40A-204ENST00000450303 GPKOWQ92917 476 aaPredicted RBP eCLIP19.6■□□□□ 0.73
PRPF40A-204ENST00000450303 ZSCAN31Q96LW9 406 aaPredicted RBP19.6■□□□□ 0.73
PRPF40A-204ENST00000450303 NOC4LQ9BVI4 516 aaKnown RBP19.6■□□□□ 0.73
PRPF40A-204ENST00000450303 CCND2P30279 289 aa19.59■□□□□ 0.73
PRPF40A-204ENST00000450303 TOB2Q14106 344 aaPredicted RBP19.59■□□□□ 0.73
PRPF40A-204ENST00000450303 TMEM240Q5SV17 173 aa19.59■□□□□ 0.73
PRPF40A-204ENST00000450303 USP17L6PQ6QN14 398 aa19.59■□□□□ 0.73
PRPF40A-204ENST00000450303 ZNF365Q70YC5 407 aa19.59■□□□□ 0.73
PRPF40A-204ENST00000450303 HSCBQ8IWL3 235 aa19.59■□□□□ 0.73
PRPF40A-204ENST00000450303 DHX37Q8IY37 1157 aaKnown RBP19.59■□□□□ 0.73
PRPF40A-204ENST00000450303 SNX21Q969T3 373 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms