RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 FAM129AQ9BZQ8 928 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ZSWIM5Q9P217 1185 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 STK38LQ9Y2H1 464 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 NRXN3Q9Y4C0 1643 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 FTCDO95954 541 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 ALADP13716 330 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 MTMR3Q13615 1198 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 IFI16Q16666 785 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 PLCD4Q9BRC7 762 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 DDX60Q8IY21 1712 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 A0A1W2PQJ5 194 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 GRID2IPA4D2P6 1211 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 TTC36A6NLP5 189 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 CUL1Q13616 776 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 LPIN2Q92539 896 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 NAF1Q96HR8 494 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 AGAP1Q9UPQ3 857 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 ASAP2O43150 1006 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 ADORA1P30542 326 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 KRT2P35908 639 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 SLC39A6Q13433 755 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 SCARF1Q14162 830 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 RRP12Q5JTH9 1297 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 RNF10Q8N5U6 811 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 KCNV2Q8TDN2 545 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 EZH1Q92800 747 aaPredicted RBP10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 ZKSCAN3Q9BRR0 538 aa10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.35□□□□□ -0.75
SYNPO2-204ENST00000448416 DPPA5A6NC42 116 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 WNT7AO00755 349 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 PYGLP06737 847 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 MMEP08473 750 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 SOS2Q07890 1332 aaPredicted RBP10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 AMOTQ4VCS5 1084 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 FIGNQ5HY92 759 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 TTC38Q5R3I4 469 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 PI16Q6UXB8 463 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 MAEAQ7L5Y9 396 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 TEX9Q8N6V9 391 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 TOPAZ1Q8N9V7 1692 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 KLHL29Q96CT2 875 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 CNOT6LQ96LI5 555 aaKnown RBP10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 SELENOSQ9BQE4 189 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 KCNMB3Q9NPA1 279 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 FAM207AQ9NSI2 230 aaPredicted RBP10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 RGL1Q9NZL6 768 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 IGF2BP3O00425 579 aaKnown RBP eCLIP10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 PALMO75781 387 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 VIMP08670 466 aaKnown RBP10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 GCLCP48506 637 aaPredicted RBP10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 TEKT4Q8WW24 435 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 MYH7BA7E2Y1 1941 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 A0A0G2JS52 829 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 PJA2O43164 708 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 UBOX5O94941 541 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 STAT6P42226 847 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 LACTBP83111 547 aaPredicted RBP10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 FOXO4P98177 505 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 ATP11AP98196 1134 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 GFPT1Q06210 699 aaPredicted RBP10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 EHHADHQ08426 723 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 SEPT2Q15019 361 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 B4GALNT2Q8NHY0 566 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 LRRC59Q96AG4 307 aaKnown RBP10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 CENPTQ96BT3 561 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 ZNF317Q96PQ6 595 aaPredicted RBP10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 ECT2Q9H8V3 914 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 ABCF3Q9NUQ8 709 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 PNMA2Q9UL42 364 aa10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 PACSIN2Q9UNF0 486 aaPredicted RBP10.34□□□□□ -0.75
SYNPO2-204ENST00000448416 A8MUI8 341 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 CHN1P15882 459 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 WTAPQ15007 396 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 RRAGAQ7L523 313 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 TMC4Q7Z404 712 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 PIGWQ7Z7B1 504 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 LRRC34Q8IZ02 419 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 EIF1ADQ8N9N8 165 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 PUS3Q9BZE2 481 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 MMRN2Q9H8L6 949 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 GGT7Q9UJ14 662 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 MYH7P12883 1935 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 LCA5LO95447 670 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 HNRNPH3P31942 346 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 SLC1A4P43007 532 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 RANBP1P43487 201 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 NCALDP61601 193 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 TCIRG1Q13488 830 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 TDRD12Q587J7 1177 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 CCDC178Q5BJE1 867 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 TTI2Q6NXR4 508 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 FAM114A1Q8IWE2 563 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 USP38Q8NB14 1042 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 KLHL23Q8NBE8 558 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 TAF4BQ92750 862 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 ERGIC2Q96RQ1 377 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 MOV10L1Q9BXT6 1211 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 AFF2P51816 1311 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms