RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 ZNF34Q8IZ26 560 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 NSUN7Q8NE18 718 aaKnown RBP4.71□□□□□ -1.66
PTPN12-208ENST00000447995 BICD2Q8TD16 824 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 SNX29Q8TEQ0 813 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 FBLIM1Q8WUP2 373 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 LEO1Q8WVC0 666 aaPredicted RBP4.71□□□□□ -1.66
PTPN12-208ENST00000447995 OSBP2Q969R2 916 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 PMEPA1Q969W9 287 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 SYTL4Q96C24 671 aaPredicted RBP4.71□□□□□ -1.66
PTPN12-208ENST00000447995 FBXL18Q96ME1 805 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 CDC5LQ99459 802 aaKnown RBP4.71□□□□□ -1.66
PTPN12-208ENST00000447995 MPHOSPH8Q99549 860 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 UTP14AQ9BVJ6 771 aaKnown RBP4.71□□□□□ -1.66
PTPN12-208ENST00000447995 CLSTN2Q9H4D0 955 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 GREM2Q9H772 168 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 LATS2Q9NRM7 1088 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 USP25Q9UHP3 1055 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 FOXD3Q9UJU5 478 aaPredicted RBP4.71□□□□□ -1.66
PTPN12-208ENST00000447995 NAP1L2Q9ULW6 460 aaPredicted RBP4.71□□□□□ -1.66
PTPN12-208ENST00000447995 POLIQ9UNA4 740 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 ZBTB1Q9Y2K1 713 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 TAF6LQ9Y6J9 622 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 LRP5O75197 1615 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 ZMYM6O95789 1325 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 SPATA31A1Q5TZJ5 1347 aa4.71□□□□□ -1.66
PTPN12-208ENST00000447995 ANKRD36CQ5JPF3 1778 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 ROBO1Q9Y6N7 1651 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 WNK3Q9BYP7 1800 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 KLF18A0A0U1RQI7 1052 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 FAM170BA6NMN3 283 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 GOLGA8BA8MQT2 603 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 CPLX1O14810 134 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 GPAA1O43292 621 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 JAK2O60674 1132 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 PHACTR2O75167 634 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 TNFRSF21O75509 655 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 YEATS4O95619 227 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 FGAP02671 866 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 CTSBP07858 339 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 ADH5P11766 374 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 EDN3P14138 238 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 PDE6AP16499 860 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 GNAT2P19087 354 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 PDIA3P30101 505 aaKnown RBP4.7□□□□□ -1.66
PTPN12-208ENST00000447995 ADD2P35612 726 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 MCAMP43121 646 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 HLFQ16534 295 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 SLC9C2Q5TAH2 1124 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 GIMAP6Q6P9H5 292 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 SASS6Q6UVJ0 657 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 RBM43Q6ZSC3 357 aaKnown RBP4.7□□□□□ -1.66
PTPN12-208ENST00000447995 BRAPQ7Z569 592 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 MB21D2Q8IYB1 491 aaPredicted RBP4.7□□□□□ -1.66
PTPN12-208ENST00000447995 POU5F2Q8N7G0 328 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 VGLL2Q8N8G2 317 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 ASAP3Q8TDY4 903 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 DDX11Q96FC9 970 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 TMEM87BQ96K49 555 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 MTA3Q9BTC8 594 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 FUCA2Q9BTY2 467 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 LRRC2Q9BYS8 371 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 NACAP1Q9BZK3 213 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 CNNM2Q9H8M5 875 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 BSDC1Q9NW68 430 aaPredicted RBP4.7□□□□□ -1.66
PTPN12-208ENST00000447995 DACT1Q9NYF0 836 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 RCOR1Q9UKL0 485 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 COL16A1Q07092 1604 aaPredicted RBP4.7□□□□□ -1.66
PTPN12-208ENST00000447995 CICQ96RK0 1608 aaPredicted RBP4.7□□□□□ -1.66
PTPN12-208ENST00000447995 SALL1Q9NSC2 1324 aa4.7□□□□□ -1.66
PTPN12-208ENST00000447995 ITGB4P16144 1822 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 A0A1W2PQ27 194 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 A0A1W2PQ64 194 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 A0A1W2PQD8 194 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 METTL12A8MUP2 240 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 CYP26A1O43174 497 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 KINO60870 393 aaKnown RBP4.69□□□□□ -1.66
PTPN12-208ENST00000447995 IGSF3O75054 1194 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 IDH1O75874 414 aaKnown RBP4.69□□□□□ -1.66
PTPN12-208ENST00000447995 ADCY5O95622 1261 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 APPP05067 770 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 LIG1P18858 919 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 FGFR2P21802 821 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 CRKLP46109 303 aaKnown RBP4.69□□□□□ -1.66
PTPN12-208ENST00000447995 USP11P51784 963 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 CCT2P78371 535 aaKnown RBP4.69□□□□□ -1.66
PTPN12-208ENST00000447995 GSTM4Q03013 218 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 FAM160A1Q05DH4 1040 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 SOX4Q06945 474 aaPredicted RBP4.69□□□□□ -1.66
PTPN12-208ENST00000447995 TRIM29Q14134 588 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 SART3Q15020 963 aaKnown RBP4.69□□□□□ -1.66
PTPN12-208ENST00000447995 SF3A1Q15459 793 aaKnown RBP4.69□□□□□ -1.66
PTPN12-208ENST00000447995 ZRSR1Q15695 479 aaKnown RBP4.69□□□□□ -1.66
PTPN12-208ENST00000447995 STX1AQ16623 288 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 EXOSC6Q5RKV6 272 aaKnown RBP4.69□□□□□ -1.66
PTPN12-208ENST00000447995 TMED8Q6PL24 325 aaPredicted RBP4.69□□□□□ -1.66
PTPN12-208ENST00000447995 CLEC4GQ6UXB4 293 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 SYNE3Q6ZMZ3 975 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.69□□□□□ -1.66
PTPN12-208ENST00000447995 WFDC3Q8IUB2 231 aa4.69□□□□□ -1.66
PTPN12-208ENST00000447995 TP53INP2Q8IXH6 220 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms