RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 TCEANC2Q96MN5 208 aa27.7■■■□□ 2.02
MRPL28-205ENST00000447696 CDX2Q99626 313 aaPredicted RBP27.7■■■□□ 2.02
MRPL28-205ENST00000447696 TBX21Q9UL17 535 aa27.7■■■□□ 2.02
MRPL28-205ENST00000447696 SNX14Q9Y5W7 946 aa27.7■■■□□ 2.02
MRPL28-205ENST00000447696 TLR3O15455 904 aaKnown RBP27.69■■■□□ 2.02
MRPL28-205ENST00000447696 SMAD3P84022 425 aaKnown RBP27.69■■■□□ 2.02
MRPL28-205ENST00000447696 PURAQ00577 322 aaKnown RBP27.69■■■□□ 2.02
MRPL28-205ENST00000447696 PGM5Q15124 567 aa27.69■■■□□ 2.02
MRPL28-205ENST00000447696 VSIG10LQ86VR7 867 aa27.69■■■□□ 2.02
MRPL28-205ENST00000447696 RAB11FIP4Q86YS3 637 aa27.69■■■□□ 2.02
MRPL28-205ENST00000447696 MAFAQ8NHW3 353 aaPredicted RBP27.69■■■□□ 2.02
MRPL28-205ENST00000447696 SEMA6BQ9H3T3 888 aa27.69■■■□□ 2.02
MRPL28-205ENST00000447696 LAMA2P24043 3122 aaKnown RBP27.69■■■□□ 2.02
MRPL28-205ENST00000447696 FRMPD4Q14CM0 1322 aa27.68■■■□□ 2.02
MRPL28-205ENST00000447696 ZBTB43O43298 467 aa27.68■■■□□ 2.02
MRPL28-205ENST00000447696 GH1P01241 217 aa27.68■■■□□ 2.02
MRPL28-205ENST00000447696 RAG1P15918 1043 aa27.68■■■□□ 2.02
MRPL28-205ENST00000447696 CMTR1Q8N1G2 835 aaKnown RBP27.68■■■□□ 2.02
MRPL28-205ENST00000447696 COPS5Q92905 334 aa27.68■■■□□ 2.02
MRPL28-205ENST00000447696 JAKMIP1Q96N16 626 aaKnown RBP27.68■■■□□ 2.02
MRPL28-205ENST00000447696 BRPF3Q9ULD4 1205 aa27.68■■■□□ 2.02
MRPL28-205ENST00000447696 GRIN2DO15399 1336 aa27.67■■■□□ 2.02
MRPL28-205ENST00000447696 KIAA1217Q5T5P2 1943 aa27.67■■■□□ 2.02
MRPL28-205ENST00000447696 PIK3CDO00329 1044 aa27.67■■■□□ 2.02
MRPL28-205ENST00000447696 CD4P01730 458 aa27.67■■■□□ 2.02
MRPL28-205ENST00000447696 CCND2P30279 289 aa27.67■■■□□ 2.02
MRPL28-205ENST00000447696 RTN1Q16799 776 aa27.67■■■□□ 2.02
MRPL28-205ENST00000447696 KCNV1Q6PIU1 500 aa27.67■■■□□ 2.02
MRPL28-205ENST00000447696 FCHSD1Q86WN1 690 aa27.67■■■□□ 2.02
MRPL28-205ENST00000447696 SYMPKQ92797 1274 aaKnown RBP27.67■■■□□ 2.02
MRPL28-205ENST00000447696 CUL5Q93034 780 aa27.67■■■□□ 2.02
MRPL28-205ENST00000447696 MTG1Q9BT17 334 aaPredicted RBP27.67■■■□□ 2.02
MRPL28-205ENST00000447696 MYL3P08590 195 aa27.66■■■□□ 2.02
MRPL28-205ENST00000447696 MYCLP12524 364 aaPredicted RBP27.66■■■□□ 2.02
MRPL28-205ENST00000447696 ITGB8P26012 769 aa27.66■■■□□ 2.02
MRPL28-205ENST00000447696 ARHGAP1Q07960 439 aa27.66■■■□□ 2.02
MRPL28-205ENST00000447696 SHHQ15465 462 aa27.66■■■□□ 2.02
MRPL28-205ENST00000447696 LY6KQ17RY6 165 aa27.66■■■□□ 2.02
MRPL28-205ENST00000447696 BLOC1S2Q6QNY1 142 aa27.66■■■□□ 2.02
MRPL28-205ENST00000447696 IL31RAQ8NI17 732 aa27.66■■■□□ 2.02
MRPL28-205ENST00000447696 EMID1Q96A84 441 aaPredicted RBP27.66■■■□□ 2.02
MRPL28-205ENST00000447696 DDX41Q9UJV9 622 aaKnown RBP27.66■■■□□ 2.02
MRPL28-205ENST00000447696 MRVI1Q9Y6F6 885 aa27.66■■■□□ 2.02
MRPL28-205ENST00000447696 TMEM265A0A087WTH1 108 aa27.65■■■□□ 2.02
MRPL28-205ENST00000447696 KLF18A0A0U1RQI7 1052 aa27.65■■■□□ 2.02
MRPL28-205ENST00000447696 TIMP1P01033 207 aa27.65■■■□□ 2.02
MRPL28-205ENST00000447696 PSMA5P28066 241 aa27.65■■■□□ 2.02
MRPL28-205ENST00000447696 PSMC6P62333 389 aa27.65■■■□□ 2.02
MRPL28-205ENST00000447696 FGD1P98174 961 aa27.65■■■□□ 2.02
MRPL28-205ENST00000447696 FBXL16Q8N461 479 aa27.65■■■□□ 2.02
MRPL28-205ENST00000447696 STAM2O75886 525 aa27.64■■■□□ 2.02
MRPL28-205ENST00000447696 RGS20O76081 388 aa27.64■■■□□ 2.02
MRPL28-205ENST00000447696 SMARCC2Q8TAQ2 1214 aa27.64■■■□□ 2.02
MRPL28-205ENST00000447696 CNTNAP5Q8WYK1 1306 aa27.64■■■□□ 2.01
MRPL28-205ENST00000447696 GOLGA8AA7E2F4 631 aa27.63■■■□□ 2.01
MRPL28-205ENST00000447696 GOLGA8BA8MQT2 603 aa27.63■■■□□ 2.01
MRPL28-205ENST00000447696 MEIS2O14770 477 aa27.63■■■□□ 2.01
MRPL28-205ENST00000447696 TGFB3P10600 412 aa27.63■■■□□ 2.01
MRPL28-205ENST00000447696 CCDC82Q8N4S0 544 aa27.63■■■□□ 2.01
MRPL28-205ENST00000447696 AFG1LQ8WV93 481 aa27.63■■■□□ 2.01
MRPL28-205ENST00000447696 PRDM6Q9NQX0 595 aa27.63■■■□□ 2.01
MRPL28-205ENST00000447696 VCANP13611 3396 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 TTC28Q96AY4 2481 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 MMP3P08254 477 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 CPA1P15085 419 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 RPS6KB1P23443 525 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 FPGSQ05932 587 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 FUT2Q10981 343 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 LAMC2Q13753 1193 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 XRRA1Q6P2D8 792 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 USP17L6PQ6QN14 398 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 Q6ZUG5 572 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 TEX2Q8IWB9 1127 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 PSTPIP2Q9H939 334 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 SCN10AQ9Y5Y9 1956 aa27.62■■■□□ 2.01
MRPL28-205ENST00000447696 MFSD5Q6N075 450 aa27.61■■■□□ 2.01
MRPL28-205ENST00000447696 AGXT2Q9BYV1 514 aa27.61■■■□□ 2.01
MRPL28-205ENST00000447696 ALDH8A1Q9H2A2 487 aaPredicted RBP27.61■■■□□ 2.01
MRPL28-205ENST00000447696 NID2Q14112 1375 aa27.6■■■□□ 2.01
MRPL28-205ENST00000447696 CCDC196A0A1B0GTZ2 297 aa27.6■■■□□ 2.01
MRPL28-205ENST00000447696 hCG_1642624A0A1W2PR95 340 aa27.6■■■□□ 2.01
MRPL28-205ENST00000447696 hCG_1984214I3L0E3 225 aa27.6■■■□□ 2.01
MRPL28-205ENST00000447696 GNPTABQ3T906 1256 aa27.6■■■□□ 2.01
MRPL28-205ENST00000447696 C9orf50Q5SZB4 431 aa27.6■■■□□ 2.01
MRPL28-205ENST00000447696 PPP1R18Q6NYC8 613 aa27.6■■■□□ 2.01
MRPL28-205ENST00000447696 NFRKBQ6P4R8 1299 aa27.6■■■□□ 2.01
MRPL28-205ENST00000447696 HEATR3Q7Z4Q2 680 aa27.6■■■□□ 2.01
MRPL28-205ENST00000447696 DHX37Q8IY37 1157 aaKnown RBP27.6■■■□□ 2.01
MRPL28-205ENST00000447696 ZNF713Q8N859 430 aaPredicted RBP27.6■■■□□ 2.01
MRPL28-205ENST00000447696 PPTC7Q8NI37 304 aa27.6■■■□□ 2.01
MRPL28-205ENST00000447696 BRF1Q92994 677 aa27.6■■■□□ 2.01
MRPL28-205ENST00000447696 INPP4AQ96PE3 977 aaPredicted RBP27.6■■■□□ 2.01
MRPL28-205ENST00000447696 USP26Q9BXU7 913 aa27.6■■■□□ 2.01
MRPL28-205ENST00000447696 FAM217BQ9NTX9 383 aaPredicted RBP27.6■■■□□ 2.01
MRPL28-205ENST00000447696 B4GALT4O60513 344 aa27.59■■■□□ 2.01
MRPL28-205ENST00000447696 SUPT20HL2P0C7V6 817 aa27.59■■■□□ 2.01
MRPL28-205ENST00000447696 CASTP20810 708 aaKnown RBP27.59■■■□□ 2.01
MRPL28-205ENST00000447696 METAP2P50579 478 aaKnown RBP eCLIP27.59■■■□□ 2.01
MRPL28-205ENST00000447696 PTPN11Q06124 597 aaPredicted RBP27.59■■■□□ 2.01
MRPL28-205ENST00000447696 DGKDQ16760 1214 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms