RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 PABPC4Q13310 644 aaKnown RBP eCLIP6.04□□□□□ -1.44
LMO3-209ENST00000447609 WTAPQ15007 396 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 CCDC38Q502W7 563 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 FAM47AQ5JRC9 791 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 IFIT1BQ5T764 474 aaKnown RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 NBPF12Q5TAG4 269 aaPredicted RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 TMED8Q6PL24 325 aaPredicted RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 TRAPPC11Q7Z392 1133 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 PARP9Q8IXQ6 854 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 CCDC155Q8N6L0 562 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 ZNF784Q8NCA9 323 aaPredicted RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 ZC3H15Q8WU90 426 aaKnown RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 CPLX3Q8WVH0 158 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 TCP11Q8WWU5 503 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 ZNF512BQ96KM6 892 aaPredicted RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 CCDC17Q96LX7 622 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 SUGCTQ9HAC7 445 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 HOMER3Q9NSC5 361 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 RYDENQ9NUL5 291 aaKnown RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 ZHX2Q9Y6X8 837 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 SIPA1L3O60292 1781 aaPredicted RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 UBR2Q8IWV8 1755 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 ARFGEF2Q9Y6D5 1785 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 B4E1Z4 1266 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 TRAF5O00463 557 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 N4BP3O15049 544 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 CTDNEP1O95476 244 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 BMP15O95972 392 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 ASNSP08243 561 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 NEFHP12036 1026 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 FECHP22830 423 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 GCKP35557 465 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 RBL2Q08999 1139 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 GLE1Q53GS7 698 aaKnown RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 SPECC1Q5M775 1068 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 ZNF589Q86UQ0 364 aaPredicted RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 ANKRD13AQ8IZ07 590 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 CCDC47Q96A33 483 aaKnown RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 IQCDQ96DY2 449 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 CDCA5Q96FF9 252 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 DYNLL2Q96FJ2 89 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 NBPF3Q9H094 633 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 MAN1B1Q9UKM7 699 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 TAF1LQ8IZX4 1826 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 RGPD3A6NKT7 1758 aaPredicted RBP6.04□□□□□ -1.44
LMO3-209ENST00000447609 RGPD4Q7Z3J3 1758 aa6.04□□□□□ -1.44
LMO3-209ENST00000447609 GPR75-ASB3A0A0A6YYF3 556 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 HMGB1P1B2RPK0 211 aaPredicted RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 M0R2C6 588 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 TACC1O75410 805 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 LUC7L3O95232 432 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 MARCKSP29966 332 aaPredicted RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 RWDD2BP57060 319 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 NFIAQ12857 509 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 PAK2Q13177 524 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 BIRC2Q13490 618 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 KIF22Q14807 665 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 GRIK5Q16478 980 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 DEFB115Q30KQ5 88 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 CCDC122Q5T0U0 273 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 RAD9BQ6WBX8 426 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 KDM7AQ6ZMT4 941 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 ZNF662Q6ZS27 426 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 RAB11FIP4Q86YS3 637 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 IFT20Q8IY31 132 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 ATRIPQ8WXE1 791 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 FAM210AQ96ND0 272 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 ALS2CR12Q96Q35 445 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 STRBPQ96SI9 672 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 SH3GL2Q99962 352 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 LRRC2Q9BYS8 371 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 HSD3B7Q9H2F3 369 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 SWAP70Q9UH65 585 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 TCEAL9Q9UHQ7 104 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 SLC12A7Q9Y666 1083 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 EPN1Q9Y6I3 576 aaPredicted RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 ZMYM6O95789 1325 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 KLF18A0A0U1RQI7 1052 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 CCDC189A1A4V9 331 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 E7EWF7 191 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 GH2P01242 217 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 FGAP02671 866 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 CYP2D6P10635 497 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 HSPD1P10809 573 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 SCP2P22307 547 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 NAP1L1P55209 391 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 SPP2Q13103 211 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 PAPD7Q5XG87 772 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 CHST3Q7LGC8 479 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 APLFQ8IW19 511 aaPredicted RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 NOA1Q8NC60 698 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 C1orf131Q8NDD1 294 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.03□□□□□ -1.44
LMO3-209ENST00000447609 JAKMIP2Q96AA8 810 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 SGSM3Q96HU1 749 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 PAIP2Q9BPZ3 127 aaKnown RBP6.03□□□□□ -1.44
LMO3-209ENST00000447609 ALG1Q9BT22 464 aa6.03□□□□□ -1.44
LMO3-209ENST00000447609 SEC63Q9UGP8 760 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms