RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 ADAMTS3O15072 1205 aa12.77□□□□□ -0.37
GNE-203ENST00000447283 N4BP1O75113 896 aaKnown RBP12.77□□□□□ -0.37
GNE-203ENST00000447283 MCM3P25205 808 aa12.77□□□□□ -0.37
GNE-203ENST00000447283 USP14P54578 494 aa12.77□□□□□ -0.37
GNE-203ENST00000447283 TNFAIP1Q13829 316 aa12.77□□□□□ -0.37
GNE-203ENST00000447283 MEA1Q16626 185 aa12.77□□□□□ -0.37
GNE-203ENST00000447283 NAALADL2Q58DX5 795 aa12.77□□□□□ -0.37
GNE-203ENST00000447283 PAPD7Q5XG87 772 aaKnown RBP12.77□□□□□ -0.37
GNE-203ENST00000447283 BLIDQ8IZY5 108 aa12.77□□□□□ -0.37
GNE-203ENST00000447283 TRIM10Q9UDY6 481 aa12.77□□□□□ -0.37
GNE-203ENST00000447283 FEZ2Q9UHY8 353 aaPredicted RBP12.77□□□□□ -0.37
GNE-203ENST00000447283 FAN1Q9Y2M0 1017 aa12.77□□□□□ -0.37
GNE-203ENST00000447283 DICER1Q9UPY3 1922 aaKnown RBP12.77□□□□□ -0.37
GNE-203ENST00000447283 COL2A1P02458 1487 aaPredicted RBP12.76□□□□□ -0.37
GNE-203ENST00000447283 CNTNAP1P78357 1384 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 KLRC4O43908 158 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 RHOBTB3O94955 611 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 IVLP07476 585 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 VEGFAP15692 232 aaPredicted RBP12.76□□□□□ -0.37
GNE-203ENST00000447283 KIF5BP33176 963 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 SHMT1P34896 483 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 HERVK_113P62684 666 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 HSP90B2PQ58FF3 399 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 WDR59Q6PJI9 974 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 EHBP1Q8NDI1 1231 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 NOC3LQ8WTT2 800 aaKnown RBP12.76□□□□□ -0.37
GNE-203ENST00000447283 ANKS1AQ92625 1134 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 RPGRIP1Q96KN7 1286 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 CCDC17Q96LX7 622 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 TARSL2A2RTX5 802 aaKnown RBP12.76□□□□□ -0.37
GNE-203ENST00000447283 TRIM49BA6NDI0 452 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 LRRIQ3A6PVS8 624 aaPredicted RBP12.76□□□□□ -0.37
GNE-203ENST00000447283 M0R2N6 131 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 EPS15P42566 896 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 AARSP49588 968 aaKnown RBP eCLIP12.76□□□□□ -0.37
GNE-203ENST00000447283 DNM2P50570 870 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 PMS1P54277 932 aaKnown RBP12.76□□□□□ -0.37
GNE-203ENST00000447283 KRT83P78385 493 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 STIM1Q13586 685 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 TSR1Q2NL82 804 aaKnown RBP12.76□□□□□ -0.37
GNE-203ENST00000447283 RCSD1Q6JBY9 416 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 TATDN1Q6P1N9 297 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 LEKR1Q6ZMV7 388 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 TMEM39BQ9GZU3 492 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 DNAJC18Q9H819 358 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 HERC5Q9UII4 1024 aaKnown RBP12.76□□□□□ -0.37
GNE-203ENST00000447283 HACL1Q9UJ83 578 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 PCDHA4Q9UN74 947 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 STX8Q9UNK0 236 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 SAR1BQ9Y6B6 198 aa12.76□□□□□ -0.37
GNE-203ENST00000447283 PSMA7O14818 248 aa12.75□□□□□ -0.37
GNE-203ENST00000447283 RASA3Q14644 834 aa12.75□□□□□ -0.37
GNE-203ENST00000447283 CERKLQ49MI3 558 aaPredicted RBP12.75□□□□□ -0.37
GNE-203ENST00000447283 CCDC122Q5T0U0 273 aa12.75□□□□□ -0.37
GNE-203ENST00000447283 TTI2Q6NXR4 508 aa12.75□□□□□ -0.37
GNE-203ENST00000447283 DTHD1Q6ZMT9 781 aa12.75□□□□□ -0.37
GNE-203ENST00000447283 RETREG2Q8NC44 543 aa12.75□□□□□ -0.37
GNE-203ENST00000447283 GIMAP8Q8ND71 665 aaPredicted RBP12.75□□□□□ -0.37
GNE-203ENST00000447283 TTYH3Q9C0H2 523 aa12.75□□□□□ -0.37
GNE-203ENST00000447283 CCSER1Q9C0I3 900 aa12.75□□□□□ -0.37
GNE-203ENST00000447283 KBTBD4Q9NVX7 518 aa12.75□□□□□ -0.37
GNE-203ENST00000447283 FAM196BA6NMK8 535 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 SLURP2P0DP57 97 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 AKR1B1P15121 316 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 CKAP4Q07065 602 aaKnown RBP12.74□□□□□ -0.37
GNE-203ENST00000447283 MAP9Q49MG5 647 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 DHTKD1Q96HY7 919 aaPredicted RBP12.74□□□□□ -0.37
GNE-203ENST00000447283 TRERF1Q96PN7 1200 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 KAT14Q9H8E8 782 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.74□□□□□ -0.37
GNE-203ENST00000447283 MAGEC2Q9UBF1 373 aaPredicted RBP12.74□□□□□ -0.37
GNE-203ENST00000447283 ANO9A1A5B4 782 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 MPHOSPH10O00566 681 aaKnown RBP12.74□□□□□ -0.37
GNE-203ENST00000447283 KRT86O43790 486 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 ATP1A1P05023 1023 aaKnown RBP12.74□□□□□ -0.37
GNE-203ENST00000447283 CYLC1P35663 651 aaPredicted RBP12.74□□□□□ -0.37
GNE-203ENST00000447283 CCDC170Q8IYT3 715 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 DAGLBQ8NCG7 672 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 TRPM4Q8TD43 1214 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 CEP95Q96GE4 821 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 TRIM47Q96LD4 638 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 MMS19Q96T76 1030 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 MAGEF1Q9HAY2 307 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 HDAC6Q9UBN7 1215 aa12.74□□□□□ -0.37
GNE-203ENST00000447283 ZC3H4Q9UPT8 1303 aaKnown RBP12.74□□□□□ -0.37
GNE-203ENST00000447283 EIF3CLB5ME19 914 aaKnown RBP12.73□□□□□ -0.37
GNE-203ENST00000447283 LAD1O00515 517 aa12.73□□□□□ -0.37
GNE-203ENST00000447283 ENC1O14682 589 aa12.73□□□□□ -0.37
GNE-203ENST00000447283 TBC1D12O60347 775 aa12.73□□□□□ -0.37
GNE-203ENST00000447283 PRPHP41219 470 aa12.73□□□□□ -0.37
GNE-203ENST00000447283 GALNT17Q6IS24 598 aa12.73□□□□□ -0.37
GNE-203ENST00000447283 SRLQ86TD4 932 aa12.73□□□□□ -0.37
GNE-203ENST00000447283 PURBQ96QR8 312 aaKnown RBP12.73□□□□□ -0.37
GNE-203ENST00000447283 EIF3CQ99613 913 aaKnown RBP12.73□□□□□ -0.37
GNE-203ENST00000447283 DUSP9Q99956 384 aaKnown RBP12.73□□□□□ -0.37
GNE-203ENST00000447283 TMEM47Q9BQJ4 181 aa12.73□□□□□ -0.37
GNE-203ENST00000447283 CUEDC2Q9H467 287 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms