RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 ZNF213O14771 459 aa28.5■■■□□ 2.15
PMS1-214ENST00000446877 IQCA1Q86XH1 822 aa28.5■■■□□ 2.15
PMS1-214ENST00000446877 NT5C2P49902 561 aa28.49■■■□□ 2.15
PMS1-214ENST00000446877 ARHGEF16Q5VV41 709 aa28.49■■■□□ 2.15
PMS1-214ENST00000446877 CNKSR3Q6P9H4 555 aa28.49■■■□□ 2.15
PMS1-214ENST00000446877 PNMA1Q8ND90 353 aa28.49■■■□□ 2.15
PMS1-214ENST00000446877 KAT2BQ92831 832 aa28.49■■■□□ 2.15
PMS1-214ENST00000446877 KAT14Q9H8E8 782 aa28.49■■■□□ 2.15
PMS1-214ENST00000446877 SCN5AQ14524 2016 aa28.48■■■□□ 2.15
PMS1-214ENST00000446877 TCF20Q9UGU0 1960 aaKnown RBP28.48■■■□□ 2.15
PMS1-214ENST00000446877 DHX16O60231 1041 aaKnown RBP28.48■■■□□ 2.15
PMS1-214ENST00000446877 ADGRF4Q8IZF3 695 aa28.48■■■□□ 2.15
PMS1-214ENST00000446877 RILPL2Q969X0 211 aa28.48■■■□□ 2.15
PMS1-214ENST00000446877 CTAGE1Q96RT6 745 aa28.48■■■□□ 2.15
PMS1-214ENST00000446877 KATNAL1Q9BW62 490 aa28.48■■■□□ 2.15
PMS1-214ENST00000446877 LMCD1Q9NZU5 365 aa28.48■■■□□ 2.15
PMS1-214ENST00000446877 GTF2IRD1Q9UHL9 959 aa28.48■■■□□ 2.15
PMS1-214ENST00000446877 MRPL11Q9Y3B7 192 aaKnown RBP28.48■■■□□ 2.15
PMS1-214ENST00000446877 ABHD14A-ACY1A0A1B0GW23 586 aa28.47■■■□□ 2.15
PMS1-214ENST00000446877 LCHNA4D1U4 455 aa28.47■■■□□ 2.15
PMS1-214ENST00000446877 EFCAB14O75071 495 aa28.47■■■□□ 2.15
PMS1-214ENST00000446877 EIF3JO75822 258 aaKnown RBP28.47■■■□□ 2.15
PMS1-214ENST00000446877 CKBP12277 381 aa28.47■■■□□ 2.15
PMS1-214ENST00000446877 LAMC2Q13753 1193 aa28.47■■■□□ 2.15
PMS1-214ENST00000446877 GPNMBQ14956 572 aa28.47■■■□□ 2.15
PMS1-214ENST00000446877 TMCO2Q7Z6W1 182 aaPredicted RBP28.47■■■□□ 2.15
PMS1-214ENST00000446877 RAD9AQ99638 391 aa28.47■■■□□ 2.15
PMS1-214ENST00000446877 COL20A1Q9P218 1284 aa28.47■■■□□ 2.15
PMS1-214ENST00000446877 HDAC6Q9UBN7 1215 aa28.47■■■□□ 2.15
PMS1-214ENST00000446877 DDX41Q9UJV9 622 aaKnown RBP28.47■■■□□ 2.15
PMS1-214ENST00000446877 NEDD4P46934 1319 aa28.46■■■□□ 2.15
PMS1-214ENST00000446877 LPXNO60711 386 aa28.46■■■□□ 2.15
PMS1-214ENST00000446877 CXCL10P02778 98 aa28.46■■■□□ 2.15
PMS1-214ENST00000446877 PSEN2P49810 448 aa28.46■■■□□ 2.15
PMS1-214ENST00000446877 RBL2Q08999 1139 aa28.46■■■□□ 2.15
PMS1-214ENST00000446877 IKBKEQ14164 716 aa28.46■■■□□ 2.15
PMS1-214ENST00000446877 ASPRV1Q53RT3 343 aa28.46■■■□□ 2.15
PMS1-214ENST00000446877 FBXO11Q86XK2 927 aa28.46■■■□□ 2.15
PMS1-214ENST00000446877 DHX38Q92620 1227 aaKnown RBP28.46■■■□□ 2.15
PMS1-214ENST00000446877 CRBNQ96SW2 442 aa28.46■■■□□ 2.15
PMS1-214ENST00000446877 ALG1Q9BT22 464 aa28.46■■■□□ 2.15
PMS1-214ENST00000446877 EPHX3Q9H6B9 360 aa28.46■■■□□ 2.15
PMS1-214ENST00000446877 MRVI1Q9Y6F6 885 aa28.46■■■□□ 2.15
PMS1-214ENST00000446877 DEFB103AP81534 67 aa28.45■■■□□ 2.14
PMS1-214ENST00000446877 SPRED2Q7Z698 418 aa28.45■■■□□ 2.14
PMS1-214ENST00000446877 EMID1Q96A84 441 aaPredicted RBP28.45■■■□□ 2.14
PMS1-214ENST00000446877 VAT1LQ9HCJ6 419 aa28.45■■■□□ 2.14
PMS1-214ENST00000446877 NBNO60934 754 aa28.44■■■□□ 2.14
PMS1-214ENST00000446877 KDM4AO75164 1064 aa28.44■■■□□ 2.14
PMS1-214ENST00000446877 GJB5O95377 273 aa28.44■■■□□ 2.14
PMS1-214ENST00000446877 EIF2AK2P19525 551 aaKnown RBP28.44■■■□□ 2.14
PMS1-214ENST00000446877 PTK7Q13308 1070 aa28.44■■■□□ 2.14
PMS1-214ENST00000446877 HDAC1Q13547 482 aaPredicted RBP28.44■■■□□ 2.14
PMS1-214ENST00000446877 QRICH1Q2TAL8 776 aa28.44■■■□□ 2.14
PMS1-214ENST00000446877 DHX37Q8IY37 1157 aaKnown RBP28.44■■■□□ 2.14
PMS1-214ENST00000446877 GDPD5Q8WTR4 605 aa28.44■■■□□ 2.14
PMS1-214ENST00000446877 TGS1Q96RS0 853 aaKnown RBP28.44■■■□□ 2.14
PMS1-214ENST00000446877 MTUS1Q9ULD2 1270 aa28.44■■■□□ 2.14
PMS1-214ENST00000446877 PARP1P09874 1014 aaKnown RBP28.43■■■□□ 2.14
PMS1-214ENST00000446877 MFSD10Q14728 455 aa28.43■■■□□ 2.14
PMS1-214ENST00000446877 PPTC7Q8NI37 304 aa28.43■■■□□ 2.14
PMS1-214ENST00000446877 ANKS1AQ92625 1134 aa28.43■■■□□ 2.14
PMS1-214ENST00000446877 ZSCAN10Q96SZ4 725 aaPredicted RBP28.43■■■□□ 2.14
PMS1-214ENST00000446877 CFBP00751 764 aa28.42■■■□□ 2.14
PMS1-214ENST00000446877 NR3C2P08235 984 aa28.42■■■□□ 2.14
PMS1-214ENST00000446877 SDSP20132 328 aa28.42■■■□□ 2.14
PMS1-214ENST00000446877 KIAA0753Q2KHM9 967 aa28.42■■■□□ 2.14
PMS1-214ENST00000446877 TMEM31Q5JXX7 168 aa28.42■■■□□ 2.14
PMS1-214ENST00000446877 LRFN3Q9BTN0 628 aa28.42■■■□□ 2.14
PMS1-214ENST00000446877 SUGCTQ9HAC7 445 aa28.42■■■□□ 2.14
PMS1-214ENST00000446877 PXMP2Q9NR77 195 aa28.42■■■□□ 2.14
PMS1-214ENST00000446877 HCN4Q9Y3Q4 1203 aa28.42■■■□□ 2.14
PMS1-214ENST00000446877 ERVK-21P61565 698 aa28.41■■■□□ 2.14
PMS1-214ENST00000446877 LNPKQ9C0E8 428 aa28.41■■■□□ 2.14
PMS1-214ENST00000446877 JMJD4Q9H9V9 463 aa28.41■■■□□ 2.14
PMS1-214ENST00000446877 TET1Q8NFU7 2136 aa28.4■■■□□ 2.14
PMS1-214ENST00000446877 F2P00734 622 aa28.4■■■□□ 2.14
PMS1-214ENST00000446877 ZNF286BP0CG31 522 aa28.4■■■□□ 2.14
PMS1-214ENST00000446877 RRP1P56182 461 aaKnown RBP28.4■■■□□ 2.14
PMS1-214ENST00000446877 FAM117BQ6P1L5 589 aa28.4■■■□□ 2.14
PMS1-214ENST00000446877 TANC1Q9C0D5 1861 aa28.4■■■□□ 2.14
PMS1-214ENST00000446877 LINC01553A4QN01 128 aa28.39■■■□□ 2.14
PMS1-214ENST00000446877 B4E1Z4 1266 aa28.39■■■□□ 2.14
PMS1-214ENST00000446877 PPFIA4O75335 1185 aa28.39■■■□□ 2.14
PMS1-214ENST00000446877 ZNF618Q5T7W0 954 aa28.39■■■□□ 2.14
PMS1-214ENST00000446877 KCNV1Q6PIU1 500 aa28.39■■■□□ 2.14
PMS1-214ENST00000446877 ENAHQ8N8S7 591 aaPredicted RBP28.39■■■□□ 2.14
PMS1-214ENST00000446877 AMNQ9BXJ7 453 aa28.39■■■□□ 2.14
PMS1-214ENST00000446877 HAS3O00219 553 aa28.38■■■□□ 2.13
PMS1-214ENST00000446877 MYCLP12524 364 aaPredicted RBP28.38■■■□□ 2.13
PMS1-214ENST00000446877 TCTN1Q2MV58 587 aa28.38■■■□□ 2.13
PMS1-214ENST00000446877 UBAC1Q9BSL1 405 aa28.38■■■□□ 2.13
PMS1-214ENST00000446877 ZSWIM5Q9P217 1185 aa28.38■■■□□ 2.13
PMS1-214ENST00000446877 ARIH1Q9Y4X5 557 aaPredicted RBP28.38■■■□□ 2.13
PMS1-214ENST00000446877 INSL6Q9Y581 213 aa28.38■■■□□ 2.13
PMS1-214ENST00000446877 EMSYQ7Z589 1322 aa28.38■■■□□ 2.13
PMS1-214ENST00000446877 LGR5O75473 907 aa28.37■■■□□ 2.13
PMS1-214ENST00000446877 TRIM71Q2Q1W2 868 aaKnown RBP28.37■■■□□ 2.13
PMS1-214ENST00000446877 CWC27Q6UX04 472 aaKnown RBP28.37■■■□□ 2.13
PMS1-214ENST00000446877 SPATA33Q96N06 139 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms